| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is yfdQ [C]
Identifier: 170023451
GI number: 170023451
Start: 1337238
End: 1338017
Strand: Reverse
Name: yfdQ [C]
Synonym: YPK_1205
Alternate gene names: 170023451
Gene position: 1338017-1337238 (Counterclockwise)
Preceding gene: 170023452
Following gene: 170023450
Centisome position: 28.53
GC content: 51.54
Gene sequence:
>780_bases ATGACCGAAGTTAATTCGTTACTGGCACTCACCACCGCGCAAACAGTTTTGGAAGTGGCGGACAATCCGCTGGTACAGGT ACCAGAGGGCTACCGCGTTCAGGATTTGGAAGATTACTTACCCGCGCCTCGCCGTATGCGTCAGCGAGTTGTTTTGCTGT CTGCTGCGAGCTTTATCGCTTACTGCGTCCGTTTTGCTAATACTGGCACCACTATTCTAGCAAACAGCGAAAGCAACAGT TTACAAGCGGTTATTGACCATGCGGTGACCTCGGCGGCACCAACGTGGAACGACCACCGCGCCCACTACCGTTGTGAATT GTCCAAAGCGTGGAAGATTTGGCAGAAGTACGATGGCCAAACACTTAGCCAGGAACAGTTTGCCGAACTGCTGGAAGACC GTGCCGCCGACGTTGTTAACCCAACCGGTGCGGAATTGCTGGAAATCGCTACCAAGTTCCAAGTTATCCGTAAAGCGGTC TTCGGTTCCGCTATGCGTCTGGCTACTGGCGAATTCCAGTTCAACTACAGCGATGAGAATGAGAAAGGCACCATCGAAGT ACCGGAACTTATCACTCTCGGTCTGGCCCCGTTCCACAACGGTGAAAGCTACGAAGTGCAAGCCCGCCTCCGTTATCGCC TGCGTGAGGGAAAATTAACCTTTACTTTCAAACTGGTTAACCCTGAGCGTGTGGTTGAAGATGCCTTTAACTCCATCGTC GAGAAAGTCAAAGAAGGCGTATCGGTAGCCCACGTTCTAGACGGTTATCCCATTGATTAA
Upstream 100 bases:
>100_bases GCTACCAGAACAGGAAACCGCGCCGCTTCGCAAGGTTCAGTAGTACACCATCACCCTGGCAAATGCTGGGGTTCTTTTTA TCAGGTAGAAGGAAAGAACA
Downstream 100 bases:
>100_bases ACTAGTAATCTAGCCCATCCCCGCCCTGTGCGGGGGTGTTTTGACGAGCGGGCGTTGTGCCTGCTGTTCAAAGCACATCA ATAGAAGGCTACTTTTATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MTEVNSLLALTTAQTVLEVADNPLVQVPEGYRVQDLEDYLPAPRRMRQRVVLLSAASFIAYCVRFANTGTTILANSESNS LQAVIDHAVTSAAPTWNDHRAHYRCELSKAWKIWQKYDGQTLSQEQFAELLEDRAADVVNPTGAELLEIATKFQVIRKAV FGSAMRLATGEFQFNYSDENEKGTIEVPELITLGLAPFHNGESYEVQARLRYRLREGKLTFTFKLVNPERVVEDAFNSIV EKVKEGVSVAHVLDGYPID
Sequences:
>Translated_259_residues MTEVNSLLALTTAQTVLEVADNPLVQVPEGYRVQDLEDYLPAPRRMRQRVVLLSAASFIAYCVRFANTGTTILANSESNS LQAVIDHAVTSAAPTWNDHRAHYRCELSKAWKIWQKYDGQTLSQEQFAELLEDRAADVVNPTGAELLEIATKFQVIRKAV FGSAMRLATGEFQFNYSDENEKGTIEVPELITLGLAPFHNGESYEVQARLRYRLREGKLTFTFKLVNPERVVEDAFNSIV EKVKEGVSVAHVLDGYPID >Mature_258_residues TEVNSLLALTTAQTVLEVADNPLVQVPEGYRVQDLEDYLPAPRRMRQRVVLLSAASFIAYCVRFANTGTTILANSESNSL QAVIDHAVTSAAPTWNDHRAHYRCELSKAWKIWQKYDGQTLSQEQFAELLEDRAADVVNPTGAELLEIATKFQVIRKAVF GSAMRLATGEFQFNYSDENEKGTIEVPELITLGLAPFHNGESYEVQARLRYRLREGKLTFTFKLVNPERVVEDAFNSIVE KVKEGVSVAHVLDGYPID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29053; Mature: 28922
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEVNSLLALTTAQTVLEVADNPLVQVPEGYRVQDLEDYLPAPRRMRQRVVLLSAASFIA CCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHH YCVRFANTGTTILANSESNSLQAVIDHAVTSAAPTWNDHRAHYRCELSKAWKIWQKYDGQ HHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHCCCC TLSQEQFAELLEDRAADVVNPTGAELLEIATKFQVIRKAVFGSAMRLATGEFQFNYSDEN CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCC EKGTIEVPELITLGLAPFHNGESYEVQARLRYRLREGKLTFTFKLVNPERVVEDAFNSIV CCCCEECCHHHHHCCCCCCCCCCEEEHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHH EKVKEGVSVAHVLDGYPID HHHHHCCHHHHHHCCCCCC >Mature Secondary Structure TEVNSLLALTTAQTVLEVADNPLVQVPEGYRVQDLEDYLPAPRRMRQRVVLLSAASFIA CCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHH YCVRFANTGTTILANSESNSLQAVIDHAVTSAAPTWNDHRAHYRCELSKAWKIWQKYDGQ HHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHCCCC TLSQEQFAELLEDRAADVVNPTGAELLEIATKFQVIRKAVFGSAMRLATGEFQFNYSDEN CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCC EKGTIEVPELITLGLAPFHNGESYEVQARLRYRLREGKLTFTFKLVNPERVVEDAFNSIV CCCCEECCHHHHHCCCCCCCCCCEEEHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHH EKVKEGVSVAHVLDGYPID HHHHHCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA