Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

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The map label for this gene is yfdQ [C]

Identifier: 170023451

GI number: 170023451

Start: 1337238

End: 1338017

Strand: Reverse

Name: yfdQ [C]

Synonym: YPK_1205

Alternate gene names: 170023451

Gene position: 1338017-1337238 (Counterclockwise)

Preceding gene: 170023452

Following gene: 170023450

Centisome position: 28.53

GC content: 51.54

Gene sequence:

>780_bases
ATGACCGAAGTTAATTCGTTACTGGCACTCACCACCGCGCAAACAGTTTTGGAAGTGGCGGACAATCCGCTGGTACAGGT
ACCAGAGGGCTACCGCGTTCAGGATTTGGAAGATTACTTACCCGCGCCTCGCCGTATGCGTCAGCGAGTTGTTTTGCTGT
CTGCTGCGAGCTTTATCGCTTACTGCGTCCGTTTTGCTAATACTGGCACCACTATTCTAGCAAACAGCGAAAGCAACAGT
TTACAAGCGGTTATTGACCATGCGGTGACCTCGGCGGCACCAACGTGGAACGACCACCGCGCCCACTACCGTTGTGAATT
GTCCAAAGCGTGGAAGATTTGGCAGAAGTACGATGGCCAAACACTTAGCCAGGAACAGTTTGCCGAACTGCTGGAAGACC
GTGCCGCCGACGTTGTTAACCCAACCGGTGCGGAATTGCTGGAAATCGCTACCAAGTTCCAAGTTATCCGTAAAGCGGTC
TTCGGTTCCGCTATGCGTCTGGCTACTGGCGAATTCCAGTTCAACTACAGCGATGAGAATGAGAAAGGCACCATCGAAGT
ACCGGAACTTATCACTCTCGGTCTGGCCCCGTTCCACAACGGTGAAAGCTACGAAGTGCAAGCCCGCCTCCGTTATCGCC
TGCGTGAGGGAAAATTAACCTTTACTTTCAAACTGGTTAACCCTGAGCGTGTGGTTGAAGATGCCTTTAACTCCATCGTC
GAGAAAGTCAAAGAAGGCGTATCGGTAGCCCACGTTCTAGACGGTTATCCCATTGATTAA

Upstream 100 bases:

>100_bases
GCTACCAGAACAGGAAACCGCGCCGCTTCGCAAGGTTCAGTAGTACACCATCACCCTGGCAAATGCTGGGGTTCTTTTTA
TCAGGTAGAAGGAAAGAACA

Downstream 100 bases:

>100_bases
ACTAGTAATCTAGCCCATCCCCGCCCTGTGCGGGGGTGTTTTGACGAGCGGGCGTTGTGCCTGCTGTTCAAAGCACATCA
ATAGAAGGCTACTTTTATGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MTEVNSLLALTTAQTVLEVADNPLVQVPEGYRVQDLEDYLPAPRRMRQRVVLLSAASFIAYCVRFANTGTTILANSESNS
LQAVIDHAVTSAAPTWNDHRAHYRCELSKAWKIWQKYDGQTLSQEQFAELLEDRAADVVNPTGAELLEIATKFQVIRKAV
FGSAMRLATGEFQFNYSDENEKGTIEVPELITLGLAPFHNGESYEVQARLRYRLREGKLTFTFKLVNPERVVEDAFNSIV
EKVKEGVSVAHVLDGYPID

Sequences:

>Translated_259_residues
MTEVNSLLALTTAQTVLEVADNPLVQVPEGYRVQDLEDYLPAPRRMRQRVVLLSAASFIAYCVRFANTGTTILANSESNS
LQAVIDHAVTSAAPTWNDHRAHYRCELSKAWKIWQKYDGQTLSQEQFAELLEDRAADVVNPTGAELLEIATKFQVIRKAV
FGSAMRLATGEFQFNYSDENEKGTIEVPELITLGLAPFHNGESYEVQARLRYRLREGKLTFTFKLVNPERVVEDAFNSIV
EKVKEGVSVAHVLDGYPID
>Mature_258_residues
TEVNSLLALTTAQTVLEVADNPLVQVPEGYRVQDLEDYLPAPRRMRQRVVLLSAASFIAYCVRFANTGTTILANSESNSL
QAVIDHAVTSAAPTWNDHRAHYRCELSKAWKIWQKYDGQTLSQEQFAELLEDRAADVVNPTGAELLEIATKFQVIRKAVF
GSAMRLATGEFQFNYSDENEKGTIEVPELITLGLAPFHNGESYEVQARLRYRLREGKLTFTFKLVNPERVVEDAFNSIVE
KVKEGVSVAHVLDGYPID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29053; Mature: 28922

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEVNSLLALTTAQTVLEVADNPLVQVPEGYRVQDLEDYLPAPRRMRQRVVLLSAASFIA
CCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHH
YCVRFANTGTTILANSESNSLQAVIDHAVTSAAPTWNDHRAHYRCELSKAWKIWQKYDGQ
HHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHCCCC
TLSQEQFAELLEDRAADVVNPTGAELLEIATKFQVIRKAVFGSAMRLATGEFQFNYSDEN
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCC
EKGTIEVPELITLGLAPFHNGESYEVQARLRYRLREGKLTFTFKLVNPERVVEDAFNSIV
CCCCEECCHHHHHCCCCCCCCCCEEEHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHH
EKVKEGVSVAHVLDGYPID
HHHHHCCHHHHHHCCCCCC
>Mature Secondary Structure 
TEVNSLLALTTAQTVLEVADNPLVQVPEGYRVQDLEDYLPAPRRMRQRVVLLSAASFIA
CCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHH
YCVRFANTGTTILANSESNSLQAVIDHAVTSAAPTWNDHRAHYRCELSKAWKIWQKYDGQ
HHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHCCCC
TLSQEQFAELLEDRAADVVNPTGAELLEIATKFQVIRKAVFGSAMRLATGEFQFNYSDEN
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCC
EKGTIEVPELITLGLAPFHNGESYEVQARLRYRLREGKLTFTFKLVNPERVVEDAFNSIV
CCCCEECCHHHHHCCCCCCCCCCEEEHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHH
EKVKEGVSVAHVLDGYPID
HHHHHCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA