| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170023445
Identifier: 170023445
GI number: 170023445
Start: 1333815
End: 1333997
Strand: Reverse
Name: 170023445
Synonym: YPK_1199
Alternate gene names: NA
Gene position: 1333997-1333815 (Counterclockwise)
Preceding gene: 170023447
Following gene: 170023444
Centisome position: 28.45
GC content: 42.08
Gene sequence:
>183_bases ATGGCGATCAAAATTACGCAGTTGCATCATATTGATATTTTTAACTATATCGCGGAGTTTTTGGAAACAGCAAAACTTCT CGGCTCGTTGGAAACAGGGAATCAGTTGGCTTTTGAACTTATCGATTTTGCACAGAAAGCCGCTCAGGAGGCAGCACATG CGAATAAAGATGGAGGGTCTTGA
Upstream 100 bases:
>100_bases ACGCAATTATGCACCACGGTGGTATTGACATCAATAAACCACCGTGGTTTACTTATTTCGAAATATAAACCACGGTGGTT TATCTTAATGAGTGTGCATT
Downstream 100 bases:
>100_bases AATGAAAAACGCGTCGGTAGCAGCAACTACCGACGCGTCTAAAAAACCTAACGGAGATACAACAATGAATACTTTAGCAC TGGCAAACAGTACTAAGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 59
Protein sequence:
>60_residues MAIKITQLHHIDIFNYIAEFLETAKLLGSLETGNQLAFELIDFAQKAAQEAAHANKDGGS
Sequences:
>Translated_60_residues MAIKITQLHHIDIFNYIAEFLETAKLLGSLETGNQLAFELIDFAQKAAQEAAHANKDGGS >Mature_59_residues AIKITQLHHIDIFNYIAEFLETAKLLGSLETGNQLAFELIDFAQKAAQEAAHANKDGGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6558; Mature: 6427
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKITQLHHIDIFNYIAEFLETAKLLGSLETGNQLAFELIDFAQKAAQEAAHANKDGGS CCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AIKITQLHHIDIFNYIAEFLETAKLLGSLETGNQLAFELIDFAQKAAQEAAHANKDGGS CEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA