Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

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The map label for this gene is 170023396

Identifier: 170023396

GI number: 170023396

Start: 1287083

End: 1287451

Strand: Reverse

Name: 170023396

Synonym: YPK_1150

Alternate gene names: NA

Gene position: 1287451-1287083 (Counterclockwise)

Preceding gene: 170023400

Following gene: 170023395

Centisome position: 27.45

GC content: 46.61

Gene sequence:

>369_bases
GTGGTGAAACAGTTTACATCAGGACTCATAATTTCAACATTTTTCCTGGCAGTGCCAGGCTATGCAGCCAGTTTTGACTG
CGACAACGCAAAAGGCTACGTAGAGACATCAATCTGTACCAACCCTGTTCTTTCTAAACTGGATGATACACTTCTCAGCG
TTTATGCTAAGGCGCAGGCTGCAGCACCTGACCAAGAAATCAATATTCGCAATGAACAGCGTGAATGGCTAAAGAACTCA
CGTAATACTCTCACGAGTGAAGATGCCTTGATTTTGTCGTACGAGACCCGGATTGCTCAGCTTTCGAAAGCGAATGTTTC
GATTCCAGCATCGGCTGCATCTGAAACCCCGGTATCGACGCCAGACTGA

Upstream 100 bases:

>100_bases
TTTTTTCAAGAAAAACGCTGAAGGTGATTACTTTTTGTCTTTCGATCAATAATACTCAATGGCTCAATATGATAACTAAA
TGAGAATGAAGGGATAAAAC

Downstream 100 bases:

>100_bases
ATCCTCTCTATCTGTCGATTTCTCTCGATGAGTCGCCTCTTGTAGGATAATGCCCCCTAAAAATGGGGGCATTATCTGTG
ATGTCTATGATAACCACTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MVKQFTSGLIISTFFLAVPGYAASFDCDNAKGYVETSICTNPVLSKLDDTLLSVYAKAQAAAPDQEINIRNEQREWLKNS
RNTLTSEDALILSYETRIAQLSKANVSIPASAASETPVSTPD

Sequences:

>Translated_122_residues
MVKQFTSGLIISTFFLAVPGYAASFDCDNAKGYVETSICTNPVLSKLDDTLLSVYAKAQAAAPDQEINIRNEQREWLKNS
RNTLTSEDALILSYETRIAQLSKANVSIPASAASETPVSTPD
>Mature_122_residues
MVKQFTSGLIISTFFLAVPGYAASFDCDNAKGYVETSICTNPVLSKLDDTLLSVYAKAQAAAPDQEINIRNEQREWLKNS
RNTLTSEDALILSYETRIAQLSKANVSIPASAASETPVSTPD

Specific function: Unknown

COG id: COG4461

COG function: function code S; Uncharacterized protein conserved in bacteria, putative lipoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13220; Mature: 13220

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKQFTSGLIISTFFLAVPGYAASFDCDNAKGYVETSICTNPVLSKLDDTLLSVYAKAQA
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHCCHHHHHHHHHHHHHHHHHHH
AAPDQEINIRNEQREWLKNSRNTLTSEDALILSYETRIAQLSKANVSIPASAASETPVST
CCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCC
PD
CC
>Mature Secondary Structure
MVKQFTSGLIISTFFLAVPGYAASFDCDNAKGYVETSICTNPVLSKLDDTLLSVYAKAQA
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHCCHHHHHHHHHHHHHHHHHHH
AAPDQEINIRNEQREWLKNSRNTLTSEDALILSYETRIAQLSKANVSIPASAASETPVST
CCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCC
PD
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA