| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170022832
Identifier: 170022832
GI number: 170022832
Start: 640294
End: 640710
Strand: Direct
Name: 170022832
Synonym: YPK_0581
Alternate gene names: NA
Gene position: 640294-640710 (Clockwise)
Preceding gene: 170022831
Following gene: 170022833
Centisome position: 13.65
GC content: 37.17
Gene sequence:
>417_bases ATGTTACTTAGTATTGCTGAAATACAAAAAAAAGTTGATGAGATGGCTTTACGAGCTGGTCTCCCAAGACATTCAGTTAA TCTTTGTACCGAACCTATTGGTGAAGGCACTCCATATATTACATTTGAAAACAATATGTATAATTATATTTATTCAGAAA GAGGTTATGAATTTTCGCGGAGGGTTACTAAGTCGTTAGATGAGTTACTTTATTGGATCATGTCAGAGCTCGCTCATAAG GCAGCATTCCAATATGAGTTAGATCACAGGGTGGAAGGCAGAGATGGACGGCGCATCGCTTTTCCAAAATTTATTGAATT AATGGCGAATATGAATTCAGCATGGGAATCAGAAGCGCGACATGAAATTCAAAAAATTCTGGCTGAATCGCCTTACGACG ATAGTCTTTATACATAA
Upstream 100 bases:
>100_bases GGTGAACCAGGTGGTGGTATTCAAATATTACCTAACATGCAAGAACGAGTGAATGTGGAATGGCTTTTAAAGAATAATTA TATTCGTGAGGTTCGCTGAT
Downstream 100 bases:
>100_bases AAGCTCATGAATCCCGGCCCTGCCTGAATAGGGTGCGCCGTACCTATAAAGGTAAGTTGTGGGGCATCGCCTGGGGGCCG GAAATGAAGCTGCGCCCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MLLSIAEIQKKVDEMALRAGLPRHSVNLCTEPIGEGTPYITFENNMYNYIYSERGYEFSRRVTKSLDELLYWIMSELAHK AAFQYELDHRVEGRDGRRIAFPKFIELMANMNSAWESEARHEIQKILAESPYDDSLYT
Sequences:
>Translated_138_residues MLLSIAEIQKKVDEMALRAGLPRHSVNLCTEPIGEGTPYITFENNMYNYIYSERGYEFSRRVTKSLDELLYWIMSELAHK AAFQYELDHRVEGRDGRRIAFPKFIELMANMNSAWESEARHEIQKILAESPYDDSLYT >Mature_138_residues MLLSIAEIQKKVDEMALRAGLPRHSVNLCTEPIGEGTPYITFENNMYNYIYSERGYEFSRRVTKSLDELLYWIMSELAHK AAFQYELDHRVEGRDGRRIAFPKFIELMANMNSAWESEARHEIQKILAESPYDDSLYT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16176; Mature: 16176
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLSIAEIQKKVDEMALRAGLPRHSVNLCTEPIGEGTPYITFENNMYNYIYSERGYEFSR CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEECCCCEEHHHCCCCCHHHH RVTKSLDELLYWIMSELAHKAAFQYELDHRVEGRDGRRIAFPKFIELMANMNSAWESEAR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHCCHHHHHHHH HEIQKILAESPYDDSLYT HHHHHHHHCCCCCCCCCC >Mature Secondary Structure MLLSIAEIQKKVDEMALRAGLPRHSVNLCTEPIGEGTPYITFENNMYNYIYSERGYEFSR CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEECCCCEEHHHCCCCCHHHH RVTKSLDELLYWIMSELAHKAAFQYELDHRVEGRDGRRIAFPKFIELMANMNSAWESEAR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHCCHHHHHHHH HEIQKILAESPYDDSLYT HHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA