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The map label for this gene is yhcC [H]

Identifier: 170022782

GI number: 170022782

Start: 583619

End: 584608

Strand: Direct

Name: yhcC [H]

Synonym: YPK_0531

Alternate gene names: 170022782

Gene position: 583619-584608 (Clockwise)

Preceding gene: 170022778

Following gene: 170022783

Centisome position: 12.45

GC content: 51.01

Gene sequence:

>990_bases
TTGCTGCTTGGCCGCAACGCCAATGGCTTTGGGTATGGGCTCTTTTTGACAGGCAGTGCCAAGATCATGCAGTTACAGCA
ATTAGTCAATATGTTTGGTGCGGACTTACAGCGCCGTTATGGTGAAAAAATTCATAAACTCACGCTGCATGGCGGGTTCA
GTTGTCCGAATCGTGATGGAACTCTGGGGCGTGGTGGTTGTACTTTTTGTCAGGTTGCCTCCTTTGCTGATGAGCAAATG
CAGCAACAAAGTATCACTCAGCAACTCGCGATACAGGCCAAAAAAGCCAATCGAGCGAATCGTTATCTGGCTTATTTTCA
GGCCTATACCAGTACTTATGCAGAGGTGAATGCGTTAGCTGCAATGTATCAACAGGCATTGTGTGAGGCCGATATTGTGG
GCCTGTGCGTGGGTACTCGCCCGGATTGTGTGCCCGATGCCGTTCTGGATTTGCTGAGCAGTTATCAGCAACAAGGTTAT
GAAGTTTGGCTCGAGCTGGGTCTACAAACAGCTAATGATAAAACACTCAAACGTATTAACCGTGGACATGATTTTGCCTG
CTACCAGCAAACGGCCCGCCGTGCTCGCGCTCGTGGCCTGAAAGTGTGTTGCCATTTAATTGTGGGTTTACCTGGAGAGG
ATCGGGCGCAGGGGAGGGAAACCTTGGAAAAAGTGGTCACCACCGGTGTTGATGGGATAAAACTGCATCCACTGCATATC
GTGGAAGGCAGTACGATGGCGAAAGCCTGGCGGGCGGGGCGCTTAACGGCGTTGGCGTTGGAGGATTATGTCCTCACCGC
AGGTGAAATGATTCGCCATACACCCGCAGAGGTTGTCTATCATCGGATTTCTGCCAGTGCGCGTCGCCCTACATTGCTGG
CCCCCTTGTGGTGTGAGAATCGTTGGACAGGCATGAATGAGCTGAATAATTACCTACTCCAGCATGGCGTACAGGGCACC
GCGATTGGGGATGCTTATTGCTATCGTTAA

Upstream 100 bases:

>100_bases
GGGTTAGGCTTACCCCCCTTAATTTGACGTTACAGCGGTATTCGCGGCCCTCACTTATCCGGTTTACTGACTTAATTCAG
ATCTGCAGGATTTCGTTCGT

Downstream 100 bases:

>100_bases
GATACTTATCGTAATAGCTAAGAGAGTAATCGCCATGGTTAACAGACTTATTGCTATGGCTAAAATGCTTATTGCTATGG
CTAAAATACTCATTATTACC

Product: putative radical SAM protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MLLGRNANGFGYGLFLTGSAKIMQLQQLVNMFGADLQRRYGEKIHKLTLHGGFSCPNRDGTLGRGGCTFCQVASFADEQM
QQQSITQQLAIQAKKANRANRYLAYFQAYTSTYAEVNALAAMYQQALCEADIVGLCVGTRPDCVPDAVLDLLSSYQQQGY
EVWLELGLQTANDKTLKRINRGHDFACYQQTARRARARGLKVCCHLIVGLPGEDRAQGRETLEKVVTTGVDGIKLHPLHI
VEGSTMAKAWRAGRLTALALEDYVLTAGEMIRHTPAEVVYHRISASARRPTLLAPLWCENRWTGMNELNNYLLQHGVQGT
AIGDAYCYR

Sequences:

>Translated_329_residues
MLLGRNANGFGYGLFLTGSAKIMQLQQLVNMFGADLQRRYGEKIHKLTLHGGFSCPNRDGTLGRGGCTFCQVASFADEQM
QQQSITQQLAIQAKKANRANRYLAYFQAYTSTYAEVNALAAMYQQALCEADIVGLCVGTRPDCVPDAVLDLLSSYQQQGY
EVWLELGLQTANDKTLKRINRGHDFACYQQTARRARARGLKVCCHLIVGLPGEDRAQGRETLEKVVTTGVDGIKLHPLHI
VEGSTMAKAWRAGRLTALALEDYVLTAGEMIRHTPAEVVYHRISASARRPTLLAPLWCENRWTGMNELNNYLLQHGVQGT
AIGDAYCYR
>Mature_329_residues
MLLGRNANGFGYGLFLTGSAKIMQLQQLVNMFGADLQRRYGEKIHKLTLHGGFSCPNRDGTLGRGGCTFCQVASFADEQM
QQQSITQQLAIQAKKANRANRYLAYFQAYTSTYAEVNALAAMYQQALCEADIVGLCVGTRPDCVPDAVLDLLSSYQQQGY
EVWLELGLQTANDKTLKRINRGHDFACYQQTARRARARGLKVCCHLIVGLPGEDRAQGRETLEKVVTTGVDGIKLHPLHI
VEGSTMAKAWRAGRLTALALEDYVLTAGEMIRHTPAEVVYHRISASARRPTLLAPLWCENRWTGMNELNNYLLQHGVQGT
AIGDAYCYR

Specific function: Unknown

COG id: COG1242

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0486 [H]

Homologues:

Organism=Escherichia coli, GI2367204, Length=304, Percent_Identity=77.9605263157895, Blast_Score=503, Evalue=1e-144,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 36497; Mature: 36497

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLGRNANGFGYGLFLTGSAKIMQLQQLVNMFGADLQRRYGEKIHKLTLHGGFSCPNRDG
CCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCC
TLGRGGCTFCQVASFADEQMQQQSITQQLAIQAKKANRANRYLAYFQAYTSTYAEVNALA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMYQQALCEADIVGLCVGTRPDCVPDAVLDLLSSYQQQGYEVWLELGLQTANDKTLKRIN
HHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
RGHDFACYQQTARRARARGLKVCCHLIVGLPGEDRAQGRETLEKVVTTGVDGIKLHPLHI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEECEEEE
VEGSTMAKAWRAGRLTALALEDYVLTAGEMIRHTPAEVVYHRISASARRPTLLAPLWCEN
ECCCHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEECCCC
RWTGMNELNNYLLQHGVQGTAIGDAYCYR
CCCCHHHHHHHHHHCCCCCCEECCHHCCC
>Mature Secondary Structure
MLLGRNANGFGYGLFLTGSAKIMQLQQLVNMFGADLQRRYGEKIHKLTLHGGFSCPNRDG
CCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCC
TLGRGGCTFCQVASFADEQMQQQSITQQLAIQAKKANRANRYLAYFQAYTSTYAEVNALA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMYQQALCEADIVGLCVGTRPDCVPDAVLDLLSSYQQQGYEVWLELGLQTANDKTLKRIN
HHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
RGHDFACYQQTARRARARGLKVCCHLIVGLPGEDRAQGRETLEKVVTTGVDGIKLHPLHI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEECEEEE
VEGSTMAKAWRAGRLTALALEDYVLTAGEMIRHTPAEVVYHRISASARRPTLLAPLWCEN
ECCCHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEECCCC
RWTGMNELNNYLLQHGVQGTAIGDAYCYR
CCCCHHHHHHHHHHCCCCCCEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]