| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is mlaC [H]
Identifier: 170022766
GI number: 170022766
Start: 565518
End: 566141
Strand: Direct
Name: mlaC [H]
Synonym: YPK_0515
Alternate gene names: 170022766
Gene position: 565518-566141 (Clockwise)
Preceding gene: 170022765
Following gene: 170022767
Centisome position: 12.06
GC content: 48.4
Gene sequence:
>624_bases ATGTTTAAACGTCTATTCATGGTCGCATTGTTGGCCATAGCACCACTGGTTCATGCTGTCGATCAAAGCAACCCTTATCG TCTGATGGATGAGGCAGCGAAGAAAACCTTTACGCGTCTGAAAAATGAGCAGCCTAAGATTAAGCAAAATCCAGATTATC TCCGCACCATTGTACGCGAAGAGCTGTTGCCGTTTGTTCAGATCAAATACGCCGGCGCGTTAGTACTGGGTAGCTATTAT AAAGATGCTACACCTGCACAGCGTGAAGCGTATTTCAATGCATTCGGTAAATATCTGGAGCAGGCATACGGGCAGGCATT GGCGCTGTATCACGGCCAAACTTACGATGTGGCACCAGACCAGCCTTTAGGGGATGCCAACATCGTTGCTATCCGCGTCA CCATTCTCGATCCAAGTGGGCGTCCACCTGTCCGGTTAGATTTCCAATGGCGTAAAAATAGCCAAACCGGTAACTGGCAG GCTTATGACATGATCGCCGAAGGGGTGAGCATGATTAGCACCAAACAGAATGAATGGGCCTCTATCCTGCGCCAAAAGGG TGTGGATGGTTTGACCCAACAATTGCTGAGTGCGGCTAAACAGCCAATCACCTTAGATAAATAG
Upstream 100 bases:
>100_bases TAGCCCGGCAGTAAGTGAAACGGCTCCGGCAACTGAAACTGCAGCTCCACAGGCTGCGGTACCTTCTCTTCCCGCTCAAC ATCCTTAAGAGGGCATCTGA
Downstream 100 bases:
>100_bases TCATTTTAGATAAATTATAGGGATAAACAGTCATTATGGCGGGTGAGCTAAGCTGGCAGTCTCTGCAGGAAACACTGGTA CTGCAAGGTGAACTGGATCG
Product: toluene tolerance family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MFKRLFMVALLAIAPLVHAVDQSNPYRLMDEAAKKTFTRLKNEQPKIKQNPDYLRTIVREELLPFVQIKYAGALVLGSYY KDATPAQREAYFNAFGKYLEQAYGQALALYHGQTYDVAPDQPLGDANIVAIRVTILDPSGRPPVRLDFQWRKNSQTGNWQ AYDMIAEGVSMISTKQNEWASILRQKGVDGLTQQLLSAAKQPITLDK
Sequences:
>Translated_207_residues MFKRLFMVALLAIAPLVHAVDQSNPYRLMDEAAKKTFTRLKNEQPKIKQNPDYLRTIVREELLPFVQIKYAGALVLGSYY KDATPAQREAYFNAFGKYLEQAYGQALALYHGQTYDVAPDQPLGDANIVAIRVTILDPSGRPPVRLDFQWRKNSQTGNWQ AYDMIAEGVSMISTKQNEWASILRQKGVDGLTQQLLSAAKQPITLDK >Mature_207_residues MFKRLFMVALLAIAPLVHAVDQSNPYRLMDEAAKKTFTRLKNEQPKIKQNPDYLRTIVREELLPFVQIKYAGALVLGSYY KDATPAQREAYFNAFGKYLEQAYGQALALYHGQTYDVAPDQPLGDANIVAIRVTILDPSGRPPVRLDFQWRKNSQTGNWQ AYDMIAEGVSMISTKQNEWASILRQKGVDGLTQQLLSAAKQPITLDK
Specific function: Actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner membrane. May transfer phospholipid across the peripl
COG id: COG2854
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, auxiliary component
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaC/ttg2D family [H]
Homologues:
Organism=Escherichia coli, GI1789583, Length=209, Percent_Identity=77.511961722488, Blast_Score=343, Evalue=6e-96,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023094 - InterPro: IPR008869 [H]
Pfam domain/function: PF05494 Tol_Tol_Ttg2 [H]
EC number: NA
Molecular weight: Translated: 23409; Mature: 23409
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKRLFMVALLAIAPLVHAVDQSNPYRLMDEAAKKTFTRLKNEQPKIKQNPDYLRTIVRE CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH ELLPFVQIKYAGALVLGSYYKDATPAQREAYFNAFGKYLEQAYGQALALYHGQTYDVAPD HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEHHCCCEECCCCC QPLGDANIVAIRVTILDPSGRPPVRLDFQWRKNSQTGNWQAYDMIAEGVSMISTKQNEWA CCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHH SILRQKGVDGLTQQLLSAAKQPITLDK HHHHHCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MFKRLFMVALLAIAPLVHAVDQSNPYRLMDEAAKKTFTRLKNEQPKIKQNPDYLRTIVRE CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH ELLPFVQIKYAGALVLGSYYKDATPAQREAYFNAFGKYLEQAYGQALALYHGQTYDVAPD HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEHHCCCEECCCCC QPLGDANIVAIRVTILDPSGRPPVRLDFQWRKNSQTGNWQAYDMIAEGVSMISTKQNEWA CCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHH SILRQKGVDGLTQQLLSAAKQPITLDK HHHHHCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]