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The map label for this gene is 170022639

Identifier: 170022639

GI number: 170022639

Start: 419634

End: 420131

Strand: Direct

Name: 170022639

Synonym: YPK_0386

Alternate gene names: NA

Gene position: 419634-420131 (Clockwise)

Preceding gene: 170022637

Following gene: 170022640

Centisome position: 8.95

GC content: 44.38

Gene sequence:

>498_bases
ATGAGTAAAAATAAGCAAAGCAGTGTTGCCCCAAAAGAAAGGATTAACATCAAGTATGTGCCGAATACTGGCGACCAGGT
TGCAGAAATTGAATTACCGCTGAATCTGCTGGTTGTGGGTGATCTTAAAGGCGTGCGTGAAGAGACTTCAATTGAAGAGC
GTCAGGTTGTTTCGGTCAATAAGAATAACTTCAACTCAGTCATGAACGAAGCAAATATCAGTCTGAGTTTCAATGTGCCT
AATCGCCTTGAAGGTGATGGGGAAGAAGACATGCCGGTCGCCTTGTCGATCAAGGGTCTCGATGATTTCTCGCCTGACAA
TGTGGCGAAAAAAGTTCCAGAGCTCAAAAAAATTCTGGAACTACGGGAAGCGCTAGTGGCATTGAAAGGGCCATTGGGGA
ATATCCCGGCTTTCCGCTCTCGTCTACAGGATTTGCTTGGCAATGAAGATATGCGCGAGCAGTTGCTGAAAGAATTGGAC
ATTCTTAATCAAAAATAA

Upstream 100 bases:

>100_bases
ACTATGCGCACAGTTGAGTCAGATTAATATAAGAACCTCCCTTTCTGCTGTGGGTGACATATTGGCTGACACCCCTTATT
AGAGATTAAAAGGACGTGTG

Downstream 100 bases:

>100_bases
TGGCTCTTCATCAAAAGTAATAGCTCTTCATCAAAAATAATAGCTCGGGTAAGAGGGAATTCTACGTATGCCTTTACATG
AAGAAAATACCGTTTTAGCG

Product: type VI secretion protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Cytoplasmic Protein; Type VI Secretion Protein VasQ; Protein ImpB; Conserved Protein; Type VI Secretion System Protein ImpB

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MSKNKQSSVAPKERINIKYVPNTGDQVAEIELPLNLLVVGDLKGVREETSIEERQVVSVNKNNFNSVMNEANISLSFNVP
NRLEGDGEEDMPVALSIKGLDDFSPDNVAKKVPELKKILELREALVALKGPLGNIPAFRSRLQDLLGNEDMREQLLKELD
ILNQK

Sequences:

>Translated_165_residues
MSKNKQSSVAPKERINIKYVPNTGDQVAEIELPLNLLVVGDLKGVREETSIEERQVVSVNKNNFNSVMNEANISLSFNVP
NRLEGDGEEDMPVALSIKGLDDFSPDNVAKKVPELKKILELREALVALKGPLGNIPAFRSRLQDLLGNEDMREQLLKELD
ILNQK
>Mature_164_residues
SKNKQSSVAPKERINIKYVPNTGDQVAEIELPLNLLVVGDLKGVREETSIEERQVVSVNKNNFNSVMNEANISLSFNVPN
RLEGDGEEDMPVALSIKGLDDFSPDNVAKKVPELKKILELREALVALKGPLGNIPAFRSRLQDLLGNEDMREQLLKELDI
LNQK

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18390; Mature: 18259

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNKQSSVAPKERINIKYVPNTGDQVAEIELPLNLLVVGDLKGVREETSIEERQVVSVN
CCCCCCCCCCHHHHEEEEECCCCCCCEEEEECCEEEEEEECCCCCHHHCCCCHHHEEEEC
KNNFNSVMNEANISLSFNVPNRLEGDGEEDMPVALSIKGLDDFSPDNVAKKVPELKKILE
CCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH
LREALVALKGPLGNIPAFRSRLQDLLGNEDMREQLLKELDILNQK
HHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKNKQSSVAPKERINIKYVPNTGDQVAEIELPLNLLVVGDLKGVREETSIEERQVVSVN
CCCCCCCCCHHHHEEEEECCCCCCCEEEEECCEEEEEEECCCCCHHHCCCCHHHEEEEC
KNNFNSVMNEANISLSFNVPNRLEGDGEEDMPVALSIKGLDDFSPDNVAKKVPELKKILE
CCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH
LREALVALKGPLGNIPAFRSRLQDLLGNEDMREQLLKELDILNQK
HHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA