| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170022636
Identifier: 170022636
GI number: 170022636
Start: 418030
End: 418440
Strand: Direct
Name: 170022636
Synonym: YPK_0383
Alternate gene names: NA
Gene position: 418030-418440 (Clockwise)
Preceding gene: 170022635
Following gene: 170022637
Centisome position: 8.91
GC content: 31.39
Gene sequence:
>411_bases ATGAGTGACATCAATAAACAAATTAACCACGCCAATGATAGCCACTTTTTTTGTCATAGCATGACATTAAATATGACTGG ATCCTCGCTTGTTGTCGAAAAAAATCCTGTAGGAAATTTCCTTAAATTTGCGATGACTTTTCCTAATTTATTACTGTTGT TTTCTGATGGCACTTTAATTAAGCAAGTGGAACGCGAATTAAAAACACATCTTATTTGTAATAATTTTGTTAAAAATAAA TCCAAAATAGTCACTGTGTATATCACTTTTGGAAATGATGCTCTGCCATTAATATATTATTCTAACCGAGTATTTTATAA AAACTCATATATCAAATGCGGCGATATTGCGTGTATGAACTATACGGTAAATGAGGGGTATTTAACTACGGAGATTATTT TGTGGCGTTAA
Upstream 100 bases:
>100_bases ATTCTTTTTTATTTAATATAACGTTGAGATTCGGTTTGCGTTCGATTGGAATTATCCGTGAGCAGAGACTGAAAGACTTG CAGTATTTATTAATACACAA
Downstream 100 bases:
>100_bases TATATCCCTGGCGGCGACACATTGAATTGCACTCAATATCGGTTAAGCGCGCGATGAAGATAAAAGGAATATCAGGCGGG TTAAATACACTAAAAACCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MSDINKQINHANDSHFFCHSMTLNMTGSSLVVEKNPVGNFLKFAMTFPNLLLLFSDGTLIKQVERELKTHLICNNFVKNK SKIVTVYITFGNDALPLIYYSNRVFYKNSYIKCGDIACMNYTVNEGYLTTEIILWR
Sequences:
>Translated_136_residues MSDINKQINHANDSHFFCHSMTLNMTGSSLVVEKNPVGNFLKFAMTFPNLLLLFSDGTLIKQVERELKTHLICNNFVKNK SKIVTVYITFGNDALPLIYYSNRVFYKNSYIKCGDIACMNYTVNEGYLTTEIILWR >Mature_135_residues SDINKQINHANDSHFFCHSMTLNMTGSSLVVEKNPVGNFLKFAMTFPNLLLLFSDGTLIKQVERELKTHLICNNFVKNKS KIVTVYITFGNDALPLIYYSNRVFYKNSYIKCGDIACMNYTVNEGYLTTEIILWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15661; Mature: 15530
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDINKQINHANDSHFFCHSMTLNMTGSSLVVEKNPVGNFLKFAMTFPNLLLLFSDGTLI CCCCHHHHCCCCCCEEEEEEEEEECCCCEEEEECCCCCHHHHHHHHCCEEEEEEECCHHH KQVERELKTHLICNNFVKNKSKIVTVYITFGNDALPLIYYSNRVFYKNSYIKCGDIACMN HHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEEECCEEEEECCCEEECCEEEEE YTVNEGYLTTEIILWR EEECCCEEEEEEEEEC >Mature Secondary Structure SDINKQINHANDSHFFCHSMTLNMTGSSLVVEKNPVGNFLKFAMTFPNLLLLFSDGTLI CCCHHHHCCCCCCEEEEEEEEEECCCCEEEEECCCCCHHHHHHHHCCEEEEEEECCHHH KQVERELKTHLICNNFVKNKSKIVTVYITFGNDALPLIYYSNRVFYKNSYIKCGDIACMN HHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEEECCEEEEECCCEEECCEEEEE YTVNEGYLTTEIILWR EEECCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA