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The map label for this gene is yjaH [H]

Identifier: 170022613

GI number: 170022613

Start: 379779

End: 380432

Strand: Direct

Name: yjaH [H]

Synonym: YPK_0355

Alternate gene names: 170022613

Gene position: 379779-380432 (Clockwise)

Preceding gene: 170022612

Following gene: 170022616

Centisome position: 8.1

GC content: 53.36

Gene sequence:

>654_bases
ATGCGGCGGGTGCTGATAACCTTCGGATTAACCTTGGGTCTCAGCGCCTGTAGCAGCCTGTCAGATCCCCCTCAATTCAG
TGCCAGCGGGTATATCGCCGATAGCGGTGTTGTTCGTTTATGGCGTCAGGATAATGCGCAGCAGCAACCCCAGGTGTTGA
TGAGCGTTTACAGTCCCTACTTCGGGGGCAATACCCGAGTGACCTTCTACGAGTACCAGAATGGCATTTTACGGGAAATC
CGTCGCAATGATTTAGGCGCTACCCCACAGAGTGTCCAGTTGCGTTTCGATGAGCAAGGGCAGGTTAGCTTTATGCAACG
CCAGCTCGCATCGCGTCGTGAGTCGCTCTCTGCTGATGATATAGCGGTTTATCAGTTGGAAGCTAAACGCATTTTGGAAC
TCAGTCGTGTGCTACGTGCGGGTGACGTAAGGTTAATTCAGGGGCGTTGGCAGGATGGCATGCTTACTACCTGTGCAGGT
AAAACGTTGCGTCTGAATCTGGATGATAATTCGCAGGCATGGCTGACAACGCGGGGTGAGAAGAACACGCAGCCTCTTGG
TGTCGCATGGCTGGATTCATCTGAAGGGCAACAACTTCTGCTGGTCGCGAATCAGGACTTCTGCCGTTGGGAACCTCAGG
CAGGCAGCCTGTAA

Upstream 100 bases:

>100_bases
GTACCCGCGTTTGTTTCTGGTAAGGCACTGAAAGACGCTGTTAAGTCATAGTGTGTCAGTAAAAATAATAAGCAGGGGGG
GGATAAAACCCCTTTTGTTT

Downstream 100 bases:

>100_bases
GTTACCGATGAGCTATAAGTTAACCAATGAGCTATAAGTTAACCAATGACCTATAAGCTGCTGGTTATCAGCGGTGCAGC
GTCATAAGATAGCCAGTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MRRVLITFGLTLGLSACSSLSDPPQFSASGYIADSGVVRLWRQDNAQQQPQVLMSVYSPYFGGNTRVTFYEYQNGILREI
RRNDLGATPQSVQLRFDEQGQVSFMQRQLASRRESLSADDIAVYQLEAKRILELSRVLRAGDVRLIQGRWQDGMLTTCAG
KTLRLNLDDNSQAWLTTRGEKNTQPLGVAWLDSSEGQQLLLVANQDFCRWEPQAGSL

Sequences:

>Translated_217_residues
MRRVLITFGLTLGLSACSSLSDPPQFSASGYIADSGVVRLWRQDNAQQQPQVLMSVYSPYFGGNTRVTFYEYQNGILREI
RRNDLGATPQSVQLRFDEQGQVSFMQRQLASRRESLSADDIAVYQLEAKRILELSRVLRAGDVRLIQGRWQDGMLTTCAG
KTLRLNLDDNSQAWLTTRGEKNTQPLGVAWLDSSEGQQLLLVANQDFCRWEPQAGSL
>Mature_217_residues
MRRVLITFGLTLGLSACSSLSDPPQFSASGYIADSGVVRLWRQDNAQQQPQVLMSVYSPYFGGNTRVTFYEYQNGILREI
RRNDLGATPQSVQLRFDEQGQVSFMQRQLASRRESLSADDIAVYQLEAKRILELSRVLRAGDVRLIQGRWQDGMLTTCAG
KTLRLNLDDNSQAWLTTRGEKNTQPLGVAWLDSSEGQQLLLVANQDFCRWEPQAGSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790434, Length=218, Percent_Identity=40.3669724770642, Blast_Score=160, Evalue=6e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010858
- InterPro:   IPR012640
- InterPro:   IPR016500 [H]

Pfam domain/function: PF07356 DUF1481; PF08139 VirB [H]

EC number: NA

Molecular weight: Translated: 24423; Mature: 24423

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVLITFGLTLGLSACSSLSDPPQFSASGYIADSGVVRLWRQDNAQQQPQVLMSVYSPY
CCEEEEEECHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEEECCCCCCHHHHHHHHHCCC
FGGNTRVTFYEYQNGILREIRRNDLGATPQSVQLRFDEQGQVSFMQRQLASRRESLSADD
CCCCEEEEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCC
IAVYQLEAKRILELSRVLRAGDVRLIQGRWQDGMLTTCAGKTLRLNLDDNSQAWLTTRGE
EEEEEECHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCEEEEEECCCCCEEEEECCC
KNTQPLGVAWLDSSEGQQLLLVANQDFCRWEPQAGSL
CCCCCEEEEEECCCCCCEEEEEECCCCEEECCCCCCC
>Mature Secondary Structure
MRRVLITFGLTLGLSACSSLSDPPQFSASGYIADSGVVRLWRQDNAQQQPQVLMSVYSPY
CCEEEEEECHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEEECCCCCCHHHHHHHHHCCC
FGGNTRVTFYEYQNGILREIRRNDLGATPQSVQLRFDEQGQVSFMQRQLASRRESLSADD
CCCCEEEEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCC
IAVYQLEAKRILELSRVLRAGDVRLIQGRWQDGMLTTCAGKTLRLNLDDNSQAWLTTRGE
EEEEEECHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCEEEEEECCCCCEEEEECCC
KNTQPLGVAWLDSSEGQQLLLVANQDFCRWEPQAGSL
CCCCCEEEEEECCCCCCEEEEEECCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]