Definition | Leuconostoc citreum KM20 plasmid pLCK1, complete sequence. |
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Accession | NC_010470 |
Length | 38,713 |
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The map label for this gene is 170016332
Identifier: 170016332
GI number: 170016332
Start: 18222
End: 18668
Strand: Direct
Name: 170016332
Synonym: LCK_p100025
Alternate gene names: NA
Gene position: 18222-18668 (Clockwise)
Preceding gene: 170016331
Following gene: 170016333
Centisome position: 47.07
GC content: 37.36
Gene sequence:
>447_bases ATGAGTCAGTTATTTCCCCGTGGTTTCCGTGTTCGTTATTGGCATAGGAATTTAAGACGTGATGTTTTTATTGCAATTGG TCTTGTGCCAGTGGTCGTATTTTTGATCACGATTGTTTTTCGGTTACTTGCTATCATGCCACCTAGTAAAGGGTTAGTCA GTTTCACAAAAGCATTGGTTACAAAAGTTGATTGGTTGGCTTTTGTTAATAGTTTGTTACCAGGTCTTTATTTAACTTTG ATTGCTATGGTGGTCTTAGTGCTTGGTGCAAGTTATTGGTATTGGAAGACTTATCAATTTCAAGGTTTTTGGGCGACTGT TTTTCGCTTAGAAAGGCTATCTAATTGGCTAATTGCTAATCAATATTATTTGGTCAAGGAAGTTGATGAAAAAGAACACC GTTTGAGTTTCAATTTGGATGGTGAGAAAGGTGGTTGGCGTTGGTAA
Upstream 100 bases:
>100_bases TGCTAGTGGCATTTCAAAGGCAACTGCTGACAATAAGCCACAAACAACTGCTAAGCCCGCTGAAACTAAAACTAAGTAAT GGCAAGAAGGGGGTTAATCA
Downstream 100 bases:
>100_bases AACAAAAAATTAAGCTGCCAAAAGTCAGTTTAAAGAACAATGGTAAGGTTGGTTTTTCAATCTACTTGCCAATGGACGGA CAAAAGTATCAAGATCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MSQLFPRGFRVRYWHRNLRRDVFIAIGLVPVVVFLITIVFRLLAIMPPSKGLVSFTKALVTKVDWLAFVNSLLPGLYLTL IAMVVLVLGASYWYWKTYQFQGFWATVFRLERLSNWLIANQYYLVKEVDEKEHRLSFNLDGEKGGWRW
Sequences:
>Translated_148_residues MSQLFPRGFRVRYWHRNLRRDVFIAIGLVPVVVFLITIVFRLLAIMPPSKGLVSFTKALVTKVDWLAFVNSLLPGLYLTL IAMVVLVLGASYWYWKTYQFQGFWATVFRLERLSNWLIANQYYLVKEVDEKEHRLSFNLDGEKGGWRW >Mature_147_residues SQLFPRGFRVRYWHRNLRRDVFIAIGLVPVVVFLITIVFRLLAIMPPSKGLVSFTKALVTKVDWLAFVNSLLPGLYLTLI AMVVLVLGASYWYWKTYQFQGFWATVFRLERLSNWLIANQYYLVKEVDEKEHRLSFNLDGEKGGWRW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17492; Mature: 17361
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLFPRGFRVRYWHRNLRRDVFIAIGLVPVVVFLITIVFRLLAIMPPSKGLVSFTKALV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH TKVDWLAFVNSLLPGLYLTLIAMVVLVLGASYWYWKTYQFQGFWATVFRLERLSNWLIAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEECHHHHHHHHHHHHHHHHHHC QYYLVKEVDEKEHRLSFNLDGEKGGWRW CCCEEEHHCCHHHEEEEECCCCCCCCCC >Mature Secondary Structure SQLFPRGFRVRYWHRNLRRDVFIAIGLVPVVVFLITIVFRLLAIMPPSKGLVSFTKALV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH TKVDWLAFVNSLLPGLYLTLIAMVVLVLGASYWYWKTYQFQGFWATVFRLERLSNWLIAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEECHHHHHHHHHHHHHHHHHHC QYYLVKEVDEKEHRLSFNLDGEKGGWRW CCCEEEHHCCHHHEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA