Definition Leuconostoc citreum KM20 plasmid pLCK1, complete sequence.
Accession NC_010470
Length 38,713

Click here to switch to the map view.

The map label for this gene is 170016330

Identifier: 170016330

GI number: 170016330

Start: 17217

End: 17411

Strand: Direct

Name: 170016330

Synonym: LCK_p100023

Alternate gene names: NA

Gene position: 17217-17411 (Clockwise)

Preceding gene: 170016329

Following gene: 170016331

Centisome position: 44.47

GC content: 38.97

Gene sequence:

>195_bases
GTGAGTATGAACAAACGTATCATGGAAGGCGGTTTAAACGTTATTATGACTAATGATGAGGGCAAGACGAAGCTATTCTT
GCGTGGTGATTTTGAAAAGCCTTTAACGGCAGATGAACATACAGAATTGTTAGCTGATTTAAAGCCATTGGCTGGTAAGT
ACGAGTTCCATGTGTCGGTTGAGACTAAAATTTAA

Upstream 100 bases:

>100_bases
GGTCTATTAACAACCGACATTGAACTAATTAAGTGGTTTGAGGAAAAAGATAATCAAATTTTGAAAGGTTTGACTAAACC
TGAAAATTATATTCCACTTA

Downstream 100 bases:

>100_bases
TGTAGTGTTGCTAAGAACATTTTGATTGTTTAATCTAGAGTGTTCTTTTTATTTTGATTAAGAAAGCGAGTTTTGATTTT
TATGAGTAAGATGTTGAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MSMNKRIMEGGLNVIMTNDEGKTKLFLRGDFEKPLTADEHTELLADLKPLAGKYEFHVSVETKI

Sequences:

>Translated_64_residues
MSMNKRIMEGGLNVIMTNDEGKTKLFLRGDFEKPLTADEHTELLADLKPLAGKYEFHVSVETKI
>Mature_63_residues
SMNKRIMEGGLNVIMTNDEGKTKLFLRGDFEKPLTADEHTELLADLKPLAGKYEFHVSVETKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7253; Mature: 7121

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMNKRIMEGGLNVIMTNDEGKTKLFLRGDFEKPLTADEHTELLADLKPLAGKYEFHVSV
CCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCEEEEEEE
ETKI
EECC
>Mature Secondary Structure 
SMNKRIMEGGLNVIMTNDEGKTKLFLRGDFEKPLTADEHTELLADLKPLAGKYEFHVSV
CCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCEEEEEEE
ETKI
EECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA