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The map label for this gene is 169833418

Identifier: 169833418

GI number: 169833418

Start: 544038

End: 544586

Strand: Direct

Name: 169833418

Synonym: SPH_0594

Alternate gene names: NA

Gene position: 544038-544586 (Clockwise)

Preceding gene: 169832638

Following gene: 169832465

Centisome position: 24.23

GC content: 42.26

Gene sequence:

>549_bases
ATGGAAATTAAATTTACAATTAAACAAGTTGTTGCTGTCGGAATTGGCGCTGCCCTCTTTGTCGTCATCGGGATGATCAA
CATTCCAACCCCTGTTCCAAATACAAGCATCCAGCTTCAGTATGCGGTACAAGCGCTACTTTCTATTATTTTTGGACCGA
TTATCGGTTTGCTTGTCGGGGTGATTGGTCATGCAATCAAGGACTCTCTTGCTGGTTATGGTCTATGGTGGACTTGGATT
ATCGCTAGCGGACTCTTTGGTTTAGTTGTGGGACTTTTTAGAAAGTACGTTCGAGTGATCAATGGTGTTTTTGACTGGAA
AGATATTCTTATTTTTAACCTCATTCAACTACTTGCAAATGCCCTTGTTTGGGGTGTCTTGGCACCACTTGGAGATGTTG
TGATTTATCAAGAAGCGGCAGAAAAAGTATTTGCACAAGGGATTGTTGCGGGAATTGCCAATGGTGTATCTGTAGCTATT
GCAGGAACTCTTCTCTTACTTGCCTATGCAGGAACCCAAACTCGTGCAGGAAGTTTGAAAAAGGACTAA

Upstream 100 bases:

>100_bases
CTATCAACCAAGGTTCCTTTGCCAAGGCCTATAATGTAGGTGTCGGTTCATCTTGGACCATTGAAATAAAGAAAATAGAA
GGATAAAATAGGAGAATAGT

Downstream 100 bases:

>100_bases
TACTCAATGAAAATCAAAGAGCAAACTAGGAAGTTAGCCGCAGGTTGCTCAAAACAGTGTTTTGAGATTGTGGATAGAAC
TGACGAAGTCAGCTCAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MEIKFTIKQVVAVGIGAALFVVIGMINIPTPVPNTSIQLQYAVQALLSIIFGPIIGLLVGVIGHAIKDSLAGYGLWWTWI
IASGLFGLVVGLFRKYVRVINGVFDWKDILIFNLIQLLANALVWGVLAPLGDVVIYQEAAEKVFAQGIVAGIANGVSVAI
AGTLLLLAYAGTQTRAGSLKKD

Sequences:

>Translated_182_residues
MEIKFTIKQVVAVGIGAALFVVIGMINIPTPVPNTSIQLQYAVQALLSIIFGPIIGLLVGVIGHAIKDSLAGYGLWWTWI
IASGLFGLVVGLFRKYVRVINGVFDWKDILIFNLIQLLANALVWGVLAPLGDVVIYQEAAEKVFAQGIVAGIANGVSVAI
AGTLLLLAYAGTQTRAGSLKKD
>Mature_182_residues
MEIKFTIKQVVAVGIGAALFVVIGMINIPTPVPNTSIQLQYAVQALLSIIFGPIIGLLVGVIGHAIKDSLAGYGLWWTWI
IASGLFGLVVGLFRKYVRVINGVFDWKDILIFNLIQLLANALVWGVLAPLGDVVIYQEAAEKVFAQGIVAGIANGVSVAI
AGTLLLLAYAGTQTRAGSLKKD

Specific function: Unknown

COG id: COG4720

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0397 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009825
- InterPro:   IPR022914 [H]

Pfam domain/function: PF07155 DUF1393 [H]

EC number: NA

Molecular weight: Translated: 19301; Mature: 19301

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIKFTIKQVVAVGIGAALFVVIGMINIPTPVPNTSIQLQYAVQALLSIIFGPIIGLLVG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VIGHAIKDSLAGYGLWWTWIIASGLFGLVVGLFRKYVRVINGVFDWKDILIFNLIQLLAN
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVWGVLAPLGDVVIYQEAAEKVFAQGIVAGIANGVSVAIAGTLLLLAYAGTQTRAGSLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCC
KD
CC
>Mature Secondary Structure
MEIKFTIKQVVAVGIGAALFVVIGMINIPTPVPNTSIQLQYAVQALLSIIFGPIIGLLVG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VIGHAIKDSLAGYGLWWTWIIASGLFGLVVGLFRKYVRVINGVFDWKDILIFNLIQLLAN
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVWGVLAPLGDVVIYQEAAEKVFAQGIVAGIANGVSVAIAGTLLLLAYAGTQTRAGSLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCC
KD
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11544234 [H]