Click here to switch to the map view.

The map label for this gene is yqeB [H]

Identifier: 169824274

GI number: 169824274

Start: 639909

End: 640721

Strand: Direct

Name: yqeB [H]

Synonym: FMG_0577

Alternate gene names: 169824274

Gene position: 639909-640721 (Clockwise)

Preceding gene: 169824273

Following gene: 169824275

Centisome position: 35.6

GC content: 33.21

Gene sequence:

>813_bases
ATGCAGAAAATTTGTTTGATTAGAGGCGCAGGTGATATAGCTACAGGTACAATTCAAAAACTTGTTCATGCTGGGTTCAA
ATGCGTTGTGACAGAAGTTTCAAATCCAAGTAGTATCAGAAGGAAAGTATCACTTTCAGAGGCAATTTACGATAAAAAAG
CAACTGTTGAAGATATAGAAGCTATTTTGTGCGAAAACTTGGATGAAATTGATAAATACTTAGAACTTTACAATCCAGTT
GTTATAGTGGATCCAAAACTTACGATTTTAAATAAGAAGAGATTTGATGTCGTAGTGGATGCGATATTAGCGAAGAAAAA
TACTGGATTGAAAAAAGAAATGGCAGATATTACTATAGCTTTGGGCCCTGGTTTTGAAGCTGGCGTTGATTGTGATATTG
TGATTGAAACAATGAGAGGTCATGATTTGGCAAGAATTATAGAACAAGGATTTGCCAAGAAAAACACAAAAATTCCAGGT
GTTATAGAAGGCTTTTCAACTAAAAGAGTAATATACTCTGATTTTGAAGGAAAATTTACTAGTATCAAAAAGATTTCAGA
TATTGTTAGAAAAGGAGAAATCATAGCAAAAGTTGAAAAAAATGATATAAGAGCGACTTTAGATGGCGTTATACGAGGTA
TGATACGAGATAATTTTGATGTTACAAAAGGGCTTAAAATAATCGATATTGATCCACGATATGAAGAAGTGAAGAATTGC
TTTACAATTAGTGATAAAGCTAGAGCGATTGGTGGAGCTGTTTTAGAAGCGATAATGATGTTAGAAAACAGGAGAGAAAA
GGATGCAAAATGA

Upstream 100 bases:

>100_bases
GTCAAAAATAATAATTTAAATCATGTAAAATATGTAGACGCTTTATATGAAAGAGAACTCATGGATATAGATACAAATGA
TGATTACGAAAGGATATTAA

Downstream 100 bases:

>100_bases
TGTTTTGTTAGAAATGTATAAGTCTTTGGAAGATGGATATAAGTGTATGATGGTGACTTTATTTAAAAATAAAGGCTCAG
TTCCAGGAAAACAAGGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MQKICLIRGAGDIATGTIQKLVHAGFKCVVTEVSNPSSIRRKVSLSEAIYDKKATVEDIEAILCENLDEIDKYLELYNPV
VIVDPKLTILNKKRFDVVVDAILAKKNTGLKKEMADITIALGPGFEAGVDCDIVIETMRGHDLARIIEQGFAKKNTKIPG
VIEGFSTKRVIYSDFEGKFTSIKKISDIVRKGEIIAKVEKNDIRATLDGVIRGMIRDNFDVTKGLKIIDIDPRYEEVKNC
FTISDKARAIGGAVLEAIMMLENRREKDAK

Sequences:

>Translated_270_residues
MQKICLIRGAGDIATGTIQKLVHAGFKCVVTEVSNPSSIRRKVSLSEAIYDKKATVEDIEAILCENLDEIDKYLELYNPV
VIVDPKLTILNKKRFDVVVDAILAKKNTGLKKEMADITIALGPGFEAGVDCDIVIETMRGHDLARIIEQGFAKKNTKIPG
VIEGFSTKRVIYSDFEGKFTSIKKISDIVRKGEIIAKVEKNDIRATLDGVIRGMIRDNFDVTKGLKIIDIDPRYEEVKNC
FTISDKARAIGGAVLEAIMMLENRREKDAK
>Mature_270_residues
MQKICLIRGAGDIATGTIQKLVHAGFKCVVTEVSNPSSIRRKVSLSEAIYDKKATVEDIEAILCENLDEIDKYLELYNPV
VIVDPKLTILNKKRFDVVVDAILAKKNTGLKKEMADITIALGPGFEAGVDCDIVIETMRGHDLARIIEQGFAKKNTKIPG
VIEGFSTKRVIYSDFEGKFTSIKKISDIVRKGEIIAKVEKNDIRATLDGVIRGMIRDNFDVTKGLKIIDIDPRYEEVKNC
FTISDKARAIGGAVLEAIMMLENRREKDAK

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789240, Length=269, Percent_Identity=46.0966542750929, Blast_Score=235, Evalue=2e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR017695
- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 30003; Mature: 30003

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKICLIRGAGDIATGTIQKLVHAGFKCVVTEVSNPSSIRRKVSLSEAIYDKKATVEDIE
CCCEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHH
AILCENLDEIDKYLELYNPVVIVDPKLTILNKKRFDVVVDAILAKKNTGLKKEMADITIA
HHHHCCHHHHHHHHHHHCCEEEECCCEEEECCHHHHHHHHHHHHHCCCCCHHHHHEEEEE
LGPGFEAGVDCDIVIETMRGHDLARIIEQGFAKKNTKIPGVIEGFSTKRVIYSDFEGKFT
ECCCCCCCCCHHEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCHH
SIKKISDIVRKGEIIAKVEKNDIRATLDGVIRGMIRDNFDVTKGLKIIDIDPRYEEVKNC
HHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHCCCCHHCCCEEEECCCCHHHHHHH
FTISDKARAIGGAVLEAIMMLENRREKDAK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQKICLIRGAGDIATGTIQKLVHAGFKCVVTEVSNPSSIRRKVSLSEAIYDKKATVEDIE
CCCEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHH
AILCENLDEIDKYLELYNPVVIVDPKLTILNKKRFDVVVDAILAKKNTGLKKEMADITIA
HHHHCCHHHHHHHHHHHCCEEEECCCEEEECCHHHHHHHHHHHHHCCCCCHHHHHEEEEE
LGPGFEAGVDCDIVIETMRGHDLARIIEQGFAKKNTKIPGVIEGFSTKRVIYSDFEGKFT
ECCCCCCCCCHHEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCHH
SIKKISDIVRKGEIIAKVEKNDIRATLDGVIRGMIRDNFDVTKGLKIIDIDPRYEEVKNC
HHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHCCCCHHCCCEEEECCCCHHHHHHH
FTISDKARAIGGAVLEAIMMLENRREKDAK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]