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The map label for this gene is yraN [C]

Identifier: 169824230

GI number: 169824230

Start: 594945

End: 595292

Strand: Direct

Name: yraN [C]

Synonym: FMG_0533

Alternate gene names: 169824230

Gene position: 594945-595292 (Clockwise)

Preceding gene: 169824229

Following gene: 169824231

Centisome position: 33.1

GC content: 29.89

Gene sequence:

>348_bases
ATGAAAATGGAAAAAAACCGAGGTAAATTTGCCGAGGATTACGCTTGTGAATATTTGACAGAAAAAGGTTACGAAATAAT
TGATAGAAATTATTCCGAAAGAATTGGAGAACTGGACATAGTATGTACTTATGAAAATTTTTTGGTAATAGTTGAAGTAA
AAGCAAGAGTTGATGATAAATTTGGCGCCCCTTCTGATTTTGTAACTTCAGGAAAACAAGACAGGATAAGAAAGACTACT
GAAATTTATATCGACAAACATGATTTGTACGATTATCAGCCGAGATTTGATGTAATAGAAATTTATTTGGATAATTTTAA
ATTAAATCACTATATTGACGCATTTTAA

Upstream 100 bases:

>100_bases
TTTGAAAAACACAAAGGCTACGGAACGAAACTACATCGAGAAATGATACTAGAACATGGTGAATGTCCGCTTCACAGAAA
AACTTTTTTGAGGAAATTAT

Downstream 100 bases:

>100_bases
TGTTGACAACAGGCTGGTATTTTTATATAATATCAAGGTCAAGCAAATATATTGACACAAAGAGGTTTTAATATGTATAA
AGTAGCAGTGCTTACAGTAT

Product: putative endonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MKMEKNRGKFAEDYACEYLTEKGYEIIDRNYSERIGELDIVCTYENFLVIVEVKARVDDKFGAPSDFVTSGKQDRIRKTT
EIYIDKHDLYDYQPRFDVIEIYLDNFKLNHYIDAF

Sequences:

>Translated_115_residues
MKMEKNRGKFAEDYACEYLTEKGYEIIDRNYSERIGELDIVCTYENFLVIVEVKARVDDKFGAPSDFVTSGKQDRIRKTT
EIYIDKHDLYDYQPRFDVIEIYLDNFKLNHYIDAF
>Mature_115_residues
MKMEKNRGKFAEDYACEYLTEKGYEIIDRNYSERIGELDIVCTYENFLVIVEVKARVDDKFGAPSDFVTSGKQDRIRKTT
EIYIDKHDLYDYQPRFDVIEIYLDNFKLNHYIDAF

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 13761; Mature: 13761

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMEKNRGKFAEDYACEYLTEKGYEIIDRNYSERIGELDIVCTYENFLVIVEVKARVDDK
CCCCCCCCCCCHHHHHHHHHHCCHHEECCCCHHCCCCEEEEEEECCEEEEEEEEECCCCC
FGAPSDFVTSGKQDRIRKTTEIYIDKHDLYDYQPRFDVIEIYLDNFKLNHYIDAF
CCCCCHHHCCCCHHHHCEEEEEEEECCCCCCCCCCCEEEEEEECCEEECEEECCC
>Mature Secondary Structure
MKMEKNRGKFAEDYACEYLTEKGYEIIDRNYSERIGELDIVCTYENFLVIVEVKARVDDK
CCCCCCCCCCCHHHHHHHHHHCCHHEECCCCHHCCCCEEEEEEECCEEEEEEEEECCCCC
FGAPSDFVTSGKQDRIRKTTEIYIDKHDLYDYQPRFDVIEIYLDNFKLNHYIDAF
CCCCCHHHCCCCHHHHCEEEEEEEECCCCCCCCCCCEEEEEEECCEEECEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]