Definition | Finegoldia magna ATCC 29328 chromosome, complete genome. |
---|---|
Accession | NC_010376 |
Length | 1,797,577 |
Click here to switch to the map view.
The map label for this gene is 169824149
Identifier: 169824149
GI number: 169824149
Start: 508641
End: 509630
Strand: Direct
Name: 169824149
Synonym: FMG_0452
Alternate gene names: NA
Gene position: 508641-509630 (Clockwise)
Preceding gene: 169824148
Following gene: 169824150
Centisome position: 28.3
GC content: 31.21
Gene sequence:
>990_bases ATGAATTACGTTGTAATACCAGCGTACAAACCAGACGAAAAACTCACAAAATTGGTGGACAATTTATCGGTAAACCACCT AAATATAATTGTAGTTAAAGATGGTCCGTGCGATTATGATTTTTCAAAACTTAATAATATAGTTCTTCTAGAGCATCAAA CTAATATGGGAAAAGGAGCCGCTCTTAAAACTGCGTTCAAATATTTGAAAGCCCAACAAGCAAATGGGACAGTGGTTACA AGTGATGCTGACGGACAACATTTGGTGAAGGATATTTTAAAATTAATAAAATTTTCTGAACAAAACAAGGATAAGCTGAT ACTTGGAGTCAGAGATTTAAAAAGAGGAATCCCGATTAAATCTTTGCTAGGCAACACTATAACGAGAATGGTATTTTATT CTAGTTCATCGAAATACATTAAGGACACGCAAACGGGACTTCGTGCATTCAACACATCACAGCTTGATAAAATGATTGAA ATCGAAGGGGACAGATACGAATACGAAATGAATATGCTTTATGAATTTGACTCGGAAAGCATAATGCAAGTTCCTATCGA AACCATTTATATAGAAAATAATGAAACAAGTCATTTTAATGCACTTAAAGATTCAGCAAAAATCTACAAAAGTATATTAA AATTTTCTACGTCAAGTTATTTGAGCTTTTTAGTGGATTATTTTACTTTTATATTGTTATTTTACAAATTAGATGTACAA AGTTTGGTGTTGTCTAATATAATAGCAAGGGCAGTATCAAGCACGTTTAACTTTTATGTGAATAACAAATATGTATTCAA AAACAAAGATAAAATTCTAAAAAAATACATCAAATATGTGACACTCGTAGTGTTCATATTAGCCTTGAATACAGTCGTGT TAAAAATTTTGCAAGCTTTAGGAATCAGAGTCTTTGTGGCGAAAATCATAACCGAAGCTTTGATGTTCATAGTAAGCTAC AATATTCAAAAAAGAATAATATTCAAATAG
Upstream 100 bases:
>100_bases TTAACAAAAGAATCAGAAAAATTCAAGATAAAACTGGCAAATTTGTATCTATAGTTCATTACGAACCAGAAGATGACGAA TAAAAAAAGATAGGAGAATT
Downstream 100 bases:
>100_bases CGCTTTTAATAGAAAAAAATTATAGAATTTTTATTAGAAGTGCTTTTTTAGTTAAAATCTTTAAAATTTTGTAGATTTTT TAGTATTGGATTTGTTGTAT
Product: putative glycosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MNYVVIPAYKPDEKLTKLVDNLSVNHLNIIVVKDGPCDYDFSKLNNIVLLEHQTNMGKGAALKTAFKYLKAQQANGTVVT SDADGQHLVKDILKLIKFSEQNKDKLILGVRDLKRGIPIKSLLGNTITRMVFYSSSSKYIKDTQTGLRAFNTSQLDKMIE IEGDRYEYEMNMLYEFDSESIMQVPIETIYIENNETSHFNALKDSAKIYKSILKFSTSSYLSFLVDYFTFILLFYKLDVQ SLVLSNIIARAVSSTFNFYVNNKYVFKNKDKILKKYIKYVTLVVFILALNTVVLKILQALGIRVFVAKIITEALMFIVSY NIQKRIIFK
Sequences:
>Translated_329_residues MNYVVIPAYKPDEKLTKLVDNLSVNHLNIIVVKDGPCDYDFSKLNNIVLLEHQTNMGKGAALKTAFKYLKAQQANGTVVT SDADGQHLVKDILKLIKFSEQNKDKLILGVRDLKRGIPIKSLLGNTITRMVFYSSSSKYIKDTQTGLRAFNTSQLDKMIE IEGDRYEYEMNMLYEFDSESIMQVPIETIYIENNETSHFNALKDSAKIYKSILKFSTSSYLSFLVDYFTFILLFYKLDVQ SLVLSNIIARAVSSTFNFYVNNKYVFKNKDKILKKYIKYVTLVVFILALNTVVLKILQALGIRVFVAKIITEALMFIVSY NIQKRIIFK >Mature_329_residues MNYVVIPAYKPDEKLTKLVDNLSVNHLNIIVVKDGPCDYDFSKLNNIVLLEHQTNMGKGAALKTAFKYLKAQQANGTVVT SDADGQHLVKDILKLIKFSEQNKDKLILGVRDLKRGIPIKSLLGNTITRMVFYSSSSKYIKDTQTGLRAFNTSQLDKMIE IEGDRYEYEMNMLYEFDSESIMQVPIETIYIENNETSHFNALKDSAKIYKSILKFSTSSYLSFLVDYFTFILLFYKLDVQ SLVLSNIIARAVSSTFNFYVNNKYVFKNKDKILKKYIKYVTLVVFILALNTVVLKILQALGIRVFVAKIITEALMFIVSY NIQKRIIFK
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 37780; Mature: 37780
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYVVIPAYKPDEKLTKLVDNLSVNHLNIIVVKDGPCDYDFSKLNNIVLLEHQTNMGKGA CCEEEECCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHCCCEEEEEECCCCCCCH ALKTAFKYLKAQQANGTVVTSDADGQHLVKDILKLIKFSEQNKDKLILGVRDLKRGIPIK HHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHCCCHH SLLGNTITRMVFYSSSSKYIKDTQTGLRAFNTSQLDKMIEIEGDRYEYEMNMLYEFDSES HHHHHHHHHHHEECCCCCHHHHHHHHHHHCCHHHHHHHEEECCCEEEEEEEEEEECCCCC IMQVPIETIYIENNETSHFNALKDSAKIYKSILKFSTSSYLSFLVDYFTFILLFYKLDVQ CEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLVLSNIIARAVSSTFNFYVNNKYVFKNKDKILKKYIKYVTLVVFILALNTVVLKILQAL HHHHHHHHHHHHHHHHEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIRVFVAKIITEALMFIVSYNIQKRIIFK HHHHHHHHHHHHHHHHHHHHCCCEEEECC >Mature Secondary Structure MNYVVIPAYKPDEKLTKLVDNLSVNHLNIIVVKDGPCDYDFSKLNNIVLLEHQTNMGKGA CCEEEECCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHCCCEEEEEECCCCCCCH ALKTAFKYLKAQQANGTVVTSDADGQHLVKDILKLIKFSEQNKDKLILGVRDLKRGIPIK HHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHCCCHH SLLGNTITRMVFYSSSSKYIKDTQTGLRAFNTSQLDKMIEIEGDRYEYEMNMLYEFDSES HHHHHHHHHHHEECCCCCHHHHHHHHHHHCCHHHHHHHEEECCCEEEEEEEEEEECCCCC IMQVPIETIYIENNETSHFNALKDSAKIYKSILKFSTSSYLSFLVDYFTFILLFYKLDVQ CEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLVLSNIIARAVSSTFNFYVNNKYVFKNKDKILKKYIKYVTLVVFILALNTVVLKILQAL HHHHHHHHHHHHHHHHEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIRVFVAKIITEALMFIVSYNIQKRIIFK HHHHHHHHHHHHHHHHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]