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The map label for this gene is yccM [C]

Identifier: 169823997

GI number: 169823997

Start: 347911

End: 348816

Strand: Direct

Name: yccM [C]

Synonym: FMG_0300

Alternate gene names: 169823997

Gene position: 347911-348816 (Clockwise)

Preceding gene: 169823996

Following gene: 169823998

Centisome position: 19.35

GC content: 31.57

Gene sequence:

>906_bases
TTGGAATTGGATAAAATAAAAAATTTACTAAAGTTTGGAGATAAGAAAAATAAGTACAAAGTAATGGATAATTTCAGACA
CGCTTTCCAATCACTGTGGTTTTTGATTACAAATTCTTATGTTGAGGGATTTAAAACCGGGAAAATTTACGGCGGAAATT
TGAAAAAAATCTGTGTTCCGGGCATGAATTGTTATTCGTGCCCTGGAGCAAAAGGAAGTTGTCCAATAGGTTCGTTACAG
GCTGTAATTGGAAATTCAAATTTCAAGTTTAGCTATTACATAGTCGGATTTTTGTTTTTTATTGGCGCATTGATGGGAAG
ATTTGTGTGTGGATGGTTGTGTCCATTTGGATTGATTCAGGATTTACTGTACAAAATTCCTTTTTTCAAAAAAATAAAAA
CTTTCAAATACGATAAACATTTGAGAAAATTAAAATATTTTATTTTGCTAATTTTCGTAATAATTTTGCCGATGTTCTTG
GTTGATATTTTGGGACAAGGATCGCCGTATTTTTGTAAACTTATTTGTCCAATAGGAATGCTTGAAGGTGGAATTCCTCT
GGTACTGCTCAATAAAAGCATGAGAGGTGCGATTGGGTTTTTGTATTATTGGAAAGGAAGTATTCTAATAATTACAATTT
TACTTTCAATAATAATTTATAGACCTTTCTGTAAATATATTTGTCCTTTGGGTGCGATTTATTCGTTTTTCAATCCGATT
TCTATTTTCAAATATAGATTGGACAAAGATAAATGTATAAGTTGTGGAAGATGTAAGAAAGTGTGTCAAATGAACATCGA
TCCTACTAAAAATTGCAATCACAAAGAATGCATCAGATGTGCTAGATGCAAAAACGCCTGTCCAGTTGATGCTATAAGTT
GTGGAATAAAGGATAAAAACAGATAA

Upstream 100 bases:

>100_bases
ATGATTTTGTGTTTATCAGTTGGTATGATTTATTACGGATACAACAACGGTGAAGTCAAAGTCGTGTTGGATAAGGCTAT
AAGAATTTGCATGGAGTGTA

Downstream 100 bases:

>100_bases
TAAAATATATAGAAAAATATTTCTCAAAAATCTTTAACAATCCATTTATAGAAAATTTCAATAAATAACCCTTGGGTTTC
GAAGTATGTGTATGATACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MELDKIKNLLKFGDKKNKYKVMDNFRHAFQSLWFLITNSYVEGFKTGKIYGGNLKKICVPGMNCYSCPGAKGSCPIGSLQ
AVIGNSNFKFSYYIVGFLFFIGALMGRFVCGWLCPFGLIQDLLYKIPFFKKIKTFKYDKHLRKLKYFILLIFVIILPMFL
VDILGQGSPYFCKLICPIGMLEGGIPLVLLNKSMRGAIGFLYYWKGSILIITILLSIIIYRPFCKYICPLGAIYSFFNPI
SIFKYRLDKDKCISCGRCKKVCQMNIDPTKNCNHKECIRCARCKNACPVDAISCGIKDKNR

Sequences:

>Translated_301_residues
MELDKIKNLLKFGDKKNKYKVMDNFRHAFQSLWFLITNSYVEGFKTGKIYGGNLKKICVPGMNCYSCPGAKGSCPIGSLQ
AVIGNSNFKFSYYIVGFLFFIGALMGRFVCGWLCPFGLIQDLLYKIPFFKKIKTFKYDKHLRKLKYFILLIFVIILPMFL
VDILGQGSPYFCKLICPIGMLEGGIPLVLLNKSMRGAIGFLYYWKGSILIITILLSIIIYRPFCKYICPLGAIYSFFNPI
SIFKYRLDKDKCISCGRCKKVCQMNIDPTKNCNHKECIRCARCKNACPVDAISCGIKDKNR
>Mature_301_residues
MELDKIKNLLKFGDKKNKYKVMDNFRHAFQSLWFLITNSYVEGFKTGKIYGGNLKKICVPGMNCYSCPGAKGSCPIGSLQ
AVIGNSNFKFSYYIVGFLFFIGALMGRFVCGWLCPFGLIQDLLYKIPFFKKIKTFKYDKHLRKLKYFILLIFVIILPMFL
VDILGQGSPYFCKLICPIGMLEGGIPLVLLNKSMRGAIGFLYYWKGSILIITILLSIIIYRPFCKYICPLGAIYSFFNPI
SIFKYRLDKDKCISCGRCKKVCQMNIDPTKNCNHKECIRCARCKNACPVDAISCGIKDKNR

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1787226, Length=231, Percent_Identity=27.7056277056277, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34393; Mature: 34393

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
6.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
9.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELDKIKNLLKFGDKKNKYKVMDNFRHAFQSLWFLITNSYVEGFKTGKIYGGNLKKICVP
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEC
GMNCYSCPGAKGSCPIGSLQAVIGNSNFKFSYYIVGFLFFIGALMGRFVCGWLCPFGLIQ
CCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLLYKIPFFKKIKTFKYDKHLRKLKYFILLIFVIILPMFLVDILGQGSPYFCKLICPIGM
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LEGGIPLVLLNKSMRGAIGFLYYWKGSILIITILLSIIIYRPFCKYICPLGAIYSFFNPI
HCCCCCEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
SIFKYRLDKDKCISCGRCKKVCQMNIDPTKNCNHKECIRCARCKNACPVDAISCGIKDKN
HHHHHHCCHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCC
R
C
>Mature Secondary Structure
MELDKIKNLLKFGDKKNKYKVMDNFRHAFQSLWFLITNSYVEGFKTGKIYGGNLKKICVP
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEC
GMNCYSCPGAKGSCPIGSLQAVIGNSNFKFSYYIVGFLFFIGALMGRFVCGWLCPFGLIQ
CCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLLYKIPFFKKIKTFKYDKHLRKLKYFILLIFVIILPMFLVDILGQGSPYFCKLICPIGM
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LEGGIPLVLLNKSMRGAIGFLYYWKGSILIITILLSIIIYRPFCKYICPLGAIYSFFNPI
HCCCCCEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
SIFKYRLDKDKCISCGRCKKVCQMNIDPTKNCNHKECIRCARCKNACPVDAISCGIKDKN
HHHHHHCCHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]