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The map label for this gene is fdhD [H]

Identifier: 169823987

GI number: 169823987

Start: 339290

End: 340045

Strand: Direct

Name: fdhD [H]

Synonym: FMG_0290

Alternate gene names: 169823987

Gene position: 339290-340045 (Clockwise)

Preceding gene: 169823986

Following gene: 169823988

Centisome position: 18.87

GC content: 30.95

Gene sequence:

>756_bases
ATGAATTTTGAAAAACGTGTAATGGTTAAGAAATATAACGATGGAGTTATAGAAGAAGTAGAAGATGTTATTTTAAGAGA
ATTTTTGTTGGATATTAATATTAATTCCAAACCTATCGTAAAACTTTTGTGTATTGAAAAGGATTTACAAGAACTTGTTA
CAGGATATCTTATAACAGAAAATATTGTAAGGCCAGAAGATATACAAAACATAGATATACATATTGATGGAAATATTTGT
AATGTCAAGTTGAAAGATATCGATAACACTCCAAGTCATGTGACTACTGAAAGTGGAGATTACAAAAATGTTCCTTATAA
TTTTACAAATAGAGATGAAAAAGTAATTCCGATTGATTGGGAGGAAGAAACACTTTTGAAGATTTCTAATTTTAATTTGT
CGGGGTCGAAATTATTCAAAGAAACTGGCAATGTGCATTCTGTTGTTTTGGCAAAAGACGAAGAGATAATTTGCCAATGT
GACGATATTGGAAGATACAACGCTTTTGACAAGGCTGTGGGTACGGCTGTGTTAAATGGCGAAAAATTATCTGATTTAAT
CGCATTTACCTCGGGAAGAATTCCTTCATCAATTGTTCAAAAATGTATCAATTCAGGAATTTCTGTTATAGTTTCCAGAA
GCGCACCAACGGATGTTTCATTGGAATTAGCTGAAAAATACAATTTGTCTGTAATCGGCTTTTGCAAACAAAGTCGTTTA
AATATTTATAGAGATTTTAGAAAGAAGGATTTGTAA

Upstream 100 bases:

>100_bases
GATTTTTTAGTGAGAAATTTTGCTCACAAAAAAATAGATAATGGTGTTAAGTATTTGAATCGGCTAAAGTTGTTTGATAT
AATTAAATAAAGGAGATTTT

Downstream 100 bases:

>100_bases
TGAAAAAATTAGCGGATTTTTTGTATGCCATTATGGCAGGAGCTTTTATTGCTATGGGTGGAGTCGTATTTTTGAGCCTA
AACAATAAAATTGTCGGAGC

Product: formate dehydrogenase associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MNFEKRVMVKKYNDGVIEEVEDVILREFLLDININSKPIVKLLCIEKDLQELVTGYLITENIVRPEDIQNIDIHIDGNIC
NVKLKDIDNTPSHVTTESGDYKNVPYNFTNRDEKVIPIDWEEETLLKISNFNLSGSKLFKETGNVHSVVLAKDEEIICQC
DDIGRYNAFDKAVGTAVLNGEKLSDLIAFTSGRIPSSIVQKCINSGISVIVSRSAPTDVSLELAEKYNLSVIGFCKQSRL
NIYRDFRKKDL

Sequences:

>Translated_251_residues
MNFEKRVMVKKYNDGVIEEVEDVILREFLLDININSKPIVKLLCIEKDLQELVTGYLITENIVRPEDIQNIDIHIDGNIC
NVKLKDIDNTPSHVTTESGDYKNVPYNFTNRDEKVIPIDWEEETLLKISNFNLSGSKLFKETGNVHSVVLAKDEEIICQC
DDIGRYNAFDKAVGTAVLNGEKLSDLIAFTSGRIPSSIVQKCINSGISVIVSRSAPTDVSLELAEKYNLSVIGFCKQSRL
NIYRDFRKKDL
>Mature_251_residues
MNFEKRVMVKKYNDGVIEEVEDVILREFLLDININSKPIVKLLCIEKDLQELVTGYLITENIVRPEDIQNIDIHIDGNIC
NVKLKDIDNTPSHVTTESGDYKNVPYNFTNRDEKVIPIDWEEETLLKISNFNLSGSKLFKETGNVHSVVLAKDEEIICQC
DDIGRYNAFDKAVGTAVLNGEKLSDLIAFTSGRIPSSIVQKCINSGISVIVSRSAPTDVSLELAEKYNLSVIGFCKQSRL
NIYRDFRKKDL

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=239, Percent_Identity=23.0125523012552, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 28405; Mature: 28405

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFEKRVMVKKYNDGVIEEVEDVILREFLLDININSKPIVKLLCIEKDLQELVTGYLITE
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHC
NIVRPEDIQNIDIHIDGNICNVKLKDIDNTPSHVTTESGDYKNVPYNFTNRDEKVIPIDW
CCCCCCCCCEEEEEECCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECC
EEETLLKISNFNLSGSKLFKETGNVHSVVLAKDEEIICQCDDIGRYNAFDKAVGTAVLNG
CCCEEEEEECCCCCHHHHHHHCCCEEEEEEECCCEEEEEECCCCCCCHHHHHHHHEEECC
EKLSDLIAFTSGRIPSSIVQKCINSGISVIVSRSAPTDVSLELAEKYNLSVIGFCKQSRL
HHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCCCCCCEEEEHHHCCCEEEEECCHHHH
NIYRDFRKKDL
HHHHHHHHCCC
>Mature Secondary Structure
MNFEKRVMVKKYNDGVIEEVEDVILREFLLDININSKPIVKLLCIEKDLQELVTGYLITE
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHC
NIVRPEDIQNIDIHIDGNICNVKLKDIDNTPSHVTTESGDYKNVPYNFTNRDEKVIPIDW
CCCCCCCCCEEEEEECCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECC
EEETLLKISNFNLSGSKLFKETGNVHSVVLAKDEEIICQCDDIGRYNAFDKAVGTAVLNG
CCCEEEEEECCCCCHHHHHHHCCCEEEEEEECCCEEEEEECCCCCCCHHHHHHHHEEECC
EKLSDLIAFTSGRIPSSIVQKCINSGISVIVSRSAPTDVSLELAEKYNLSVIGFCKQSRL
HHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCCCCCCEEEEHHHCCCEEEEECCHHHH
NIYRDFRKKDL
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]