| Definition | Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence. |
|---|---|
| Accession | NC_010371 |
| Length | 189,163 |
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The map label for this gene is 169823692
Identifier: 169823692
GI number: 169823692
Start: 182049
End: 184865
Strand: Reverse
Name: 169823692
Synonym: FMG_P0178
Alternate gene names: NA
Gene position: 184865-182049 (Counterclockwise)
Preceding gene: 169823693
Following gene: 169823691
Centisome position: 97.73
GC content: 29.0
Gene sequence:
>2817_bases TTGGGATTATTTAAAAAGAAAAATAAAGAAACAAAAGAAATTGCAACAGTAGATGCTAAAAATAAAAAGCCAAAGAAATC TAAAGAGAAAGAAAATGCCCCTTTAGACGAAAATGTATTGATTGCTAAAGATGTAAATACTACAGGAAAGCTTAAAAGTA ATAAAGATATAAAAAAGAAAGCTATCAGTAAAAGAGAACAAGAACAGAAATTAAGAAAATCTAAAGAAAAGAAAGTCAAA AATTCAAAAGCCGATATATATAATAAAAAGAACACATCAACACAAAGTTTAATAGGTTATGACAGGCTTCTAAGTGACGG AACTTTAGTAATAAGAGAAAACCTACTTTATTCAAGGACAATAGAGTTTGCTGATATTAACTATAAATTGTTAGCTGAAA AAAAACAAAGTGAACTTTTCTTAAATTATGTTAAGTTTCTAAATACACTAGATGAAAATATAGCGTATGAAATGTCATTT AACAATGAATTAGTAAGTCATGATAAGTTTGTAAAAGATGTAAATATCAATTTGAAAGATGATGGTTATGATGAATTTAG GATTGAGCTTAATAATCAAAACATAGCAAAATATGACACAGATAAAAACAATAGGATAAATAGAAGAAAGTTTATAACCT ACACAGTATTGGCTGATGACTTAGAAGATGCTACAGAAAAACTTAAAAGAGCAGAAACAGCTATTAAAGAAAGATTAAAA GACATTTATCCAATAAATTCTGATGATGTTGTAAAGGTATTATCAGCTAAAGAAAGATTAAAGTTATTCAAGACGATAAT AGATCCTATGAATCATTCTAACTCAAAATATGATAATAGAATGTATTTTAGACATGGGCTAACATCTAAAGATTTTTTAG CAGAAGATTCCGCAGATTTTACTGATAAATCAATATTTGAGTGGGGAAGATATTACGGTCAAGTAAGATTTATCAAAGAT ATACCGACAGAAATGACGGATGAATTTATTCAAGATTTGACTGCTGAAAATATCAATATGATATGTTCAATCCATATTAA TCCAATTCCAAAGGATGAAACTAAGCAAATGATTAGAACTAAACTATCTTTTATGAATACAGAGAAGTTTGGTGAGAAAA GGAAATTATCAGGTAAGGGATTAGGTGCAAGTGATGAGTTTGTTGCACAATCATTAATTGAGAACTTGGAAGAGGCTAAA AAGATACAAAATAAGATTCAAGAAGAAAACGAAAAAATGTTTGTGACAACATTTTGCATTATGACAATGGCTGAAACACT TGATGAACTTATGGACAACAATTACAGAATAGACACTCTTTGTAGAAGTCATGGTATCAGTTTAGGTAATTTAGATTGGG AACAAAAAGCAGCGTTTAATACGGTTTTACCATTTGGATATAACAGACTAGATGTTTCTCGTCAATTGTTATCTAAATCT TTAGGAATATTTGAGCCATTTAGTACTCAAGATATCTATCAACCGGGTGGCTTTGTATACGGTGTAAATCCAACAAGTAA ATCAATTATTTTACTTAATAGATTAAGTAGAAAAAACCCATCAGGATTTATTATGGCAACACCAGGTTCTGGTAAATCAA TGGCCGCAAAACACGAAATAGCTAATATCTTCTTGTCTACAGATGATGATATTGTAATAGTCGACCCAGAAAGTGAATAT GGAACTTTAGTTAATAGGCTTAACGGGGAAATAATAACTTTAGGTCAAAATAAGGGTAACTATATTAACCCAATGGAATT AGAAGAACAAATAGAAATAGACAAGAATGATTTTGTTCAAAATGAAATGTTTGAAAATGAGCCAGATCCAGTATCTACAA AAATAGACTTTTTAAACTCGTTCTTTGCAATGATTACTAGAATTAATAAAAATAGTGATTCAAGTAGCTTAACGCCAGAG GAAATTTCAACAATAGATGTTGTAGGTAGAAAACTATACAAAAGATGCGAAAAAGAAAATAGAGTTCCAACTCTTAATCT TCTTTATGACACTCTTGTAAAAGAGGCTGATTATACTTCAACAAGACTTGCACAAGTATTGCAAATTTATGTTAATGACG GAAGTTTGAATATATTTTCTAAAGAATCAAACATTAATATTAAAAATAGGGTAATATCTTTCGATTTAAACTCTGTTACA CAAAACTTAAAAGGTGTGTGTCTTCTAATCATGCTTGATAATGTGTGGAACAGAATTATTCAAAACAAGAAAAAAGGAAA AAGAACATGGATTTTCATTGATGAGTTCTATTTAATGTTAAATAATGAATATTCAACTTCATTCTTATATCAATTATTTA AGCGTTCAAGAAAATACGATGGCGTAATTACAGGTATTACGCAAAATATTTCCGATATGCTTAGAACTGAAAATGCAAGA ACAATGTTTAACAACGCAACAGGTTATGTATGTCTATTAAACCAATCAGAAGACGATTTGGCAACATTAACAGAGCTTTA CGGATTATCGAAAGAGCAACAAAAATACATCTACAATGCTTCTAAAGGTAAAGGATTAATAATGACAGAAGGTGTTACTG TTCCTTTTGAAAACATAATAGCAAAAGATTCGAAACTATATAAACTTACAACATCTGATCCTAATGATATCAAGAGATAC AGGGCAGAAGATGAAAAGATTAAAGAAGACTTTGATAAGCTTATGGAAGAATATAAAGATAACAAATCTGAAGATATTGA AAATCAAATTAACGATAAGCTTAATAAAATGTACGATATTAAGTATTCGTTCCATTTAAAATCGAAGTTTAAAGAAGAAA AAAGCAAAGTCTCTTAA
Upstream 100 bases:
>100_bases GTAGAAACAAAAGAATATCGCAAGATGATAGCCGAGAAATATAAAAAAGGTAAACCTAAAGAAGAGGCGTTGTTCAATTT TGACGAAAGAGGTGAGTTGA
Downstream 100 bases:
>100_bases TAATAGAGGCTTTGTTTTATAGGAGATTTTTAATGCCAGACAAGAAAAAAGATGATATTAAAATAAAAGCTAAAGATTAT ATCTTGTATCAACAAAAACA
Product: traE like protein
Products: NA
Alternate protein names: Transfer Complex Protein; AAA ATPase; Type IV Secretory Pathway VirB4 Components-Like Protein; TraE Protein; TRSE Protein; Truncated Type IV Secretory Pathway VirB4 Component Protein; Conjugation Protein; Type IV Conjugative Transfer System Protein TraE; Aaa ATPase; Protein TrsE; TraE-Like Protein; Membrane Bound ATPase; Conjugative Transfer Gene TrsE Homolog ATPase; TraE/TrsE-Like Membrane Protein; Type IV Secretory Pathway VirB4 Protein; Conjugal Transfer Protein; TraE Family Protein; Type IV Secretory Pathway VirB4 Component-Like Protein; TrsE-Like Protein; TraE Like Protein; Type Iv Secretory Pathway Virb4 Protein-Like Protein; TRSE-Like Protein; Type IV Secretory Pathway VirB4 Component; Type IV Conjugative Transfer System Protein TraC
Number of amino acids: Translated: 938; Mature: 937
Protein sequence:
>938_residues MGLFKKKNKETKEIATVDAKNKKPKKSKEKENAPLDENVLIAKDVNTTGKLKSNKDIKKKAISKREQEQKLRKSKEKKVK NSKADIYNKKNTSTQSLIGYDRLLSDGTLVIRENLLYSRTIEFADINYKLLAEKKQSELFLNYVKFLNTLDENIAYEMSF NNELVSHDKFVKDVNINLKDDGYDEFRIELNNQNIAKYDTDKNNRINRRKFITYTVLADDLEDATEKLKRAETAIKERLK DIYPINSDDVVKVLSAKERLKLFKTIIDPMNHSNSKYDNRMYFRHGLTSKDFLAEDSADFTDKSIFEWGRYYGQVRFIKD IPTEMTDEFIQDLTAENINMICSIHINPIPKDETKQMIRTKLSFMNTEKFGEKRKLSGKGLGASDEFVAQSLIENLEEAK KIQNKIQEENEKMFVTTFCIMTMAETLDELMDNNYRIDTLCRSHGISLGNLDWEQKAAFNTVLPFGYNRLDVSRQLLSKS LGIFEPFSTQDIYQPGGFVYGVNPTSKSIILLNRLSRKNPSGFIMATPGSGKSMAAKHEIANIFLSTDDDIVIVDPESEY GTLVNRLNGEIITLGQNKGNYINPMELEEQIEIDKNDFVQNEMFENEPDPVSTKIDFLNSFFAMITRINKNSDSSSLTPE EISTIDVVGRKLYKRCEKENRVPTLNLLYDTLVKEADYTSTRLAQVLQIYVNDGSLNIFSKESNINIKNRVISFDLNSVT QNLKGVCLLIMLDNVWNRIIQNKKKGKRTWIFIDEFYLMLNNEYSTSFLYQLFKRSRKYDGVITGITQNISDMLRTENAR TMFNNATGYVCLLNQSEDDLATLTELYGLSKEQQKYIYNASKGKGLIMTEGVTVPFENIIAKDSKLYKLTTSDPNDIKRY RAEDEKIKEDFDKLMEEYKDNKSEDIENQINDKLNKMYDIKYSFHLKSKFKEEKSKVS
Sequences:
>Translated_938_residues MGLFKKKNKETKEIATVDAKNKKPKKSKEKENAPLDENVLIAKDVNTTGKLKSNKDIKKKAISKREQEQKLRKSKEKKVK NSKADIYNKKNTSTQSLIGYDRLLSDGTLVIRENLLYSRTIEFADINYKLLAEKKQSELFLNYVKFLNTLDENIAYEMSF NNELVSHDKFVKDVNINLKDDGYDEFRIELNNQNIAKYDTDKNNRINRRKFITYTVLADDLEDATEKLKRAETAIKERLK DIYPINSDDVVKVLSAKERLKLFKTIIDPMNHSNSKYDNRMYFRHGLTSKDFLAEDSADFTDKSIFEWGRYYGQVRFIKD IPTEMTDEFIQDLTAENINMICSIHINPIPKDETKQMIRTKLSFMNTEKFGEKRKLSGKGLGASDEFVAQSLIENLEEAK KIQNKIQEENEKMFVTTFCIMTMAETLDELMDNNYRIDTLCRSHGISLGNLDWEQKAAFNTVLPFGYNRLDVSRQLLSKS LGIFEPFSTQDIYQPGGFVYGVNPTSKSIILLNRLSRKNPSGFIMATPGSGKSMAAKHEIANIFLSTDDDIVIVDPESEY GTLVNRLNGEIITLGQNKGNYINPMELEEQIEIDKNDFVQNEMFENEPDPVSTKIDFLNSFFAMITRINKNSDSSSLTPE EISTIDVVGRKLYKRCEKENRVPTLNLLYDTLVKEADYTSTRLAQVLQIYVNDGSLNIFSKESNINIKNRVISFDLNSVT QNLKGVCLLIMLDNVWNRIIQNKKKGKRTWIFIDEFYLMLNNEYSTSFLYQLFKRSRKYDGVITGITQNISDMLRTENAR TMFNNATGYVCLLNQSEDDLATLTELYGLSKEQQKYIYNASKGKGLIMTEGVTVPFENIIAKDSKLYKLTTSDPNDIKRY RAEDEKIKEDFDKLMEEYKDNKSEDIENQINDKLNKMYDIKYSFHLKSKFKEEKSKVS >Mature_937_residues GLFKKKNKETKEIATVDAKNKKPKKSKEKENAPLDENVLIAKDVNTTGKLKSNKDIKKKAISKREQEQKLRKSKEKKVKN SKADIYNKKNTSTQSLIGYDRLLSDGTLVIRENLLYSRTIEFADINYKLLAEKKQSELFLNYVKFLNTLDENIAYEMSFN NELVSHDKFVKDVNINLKDDGYDEFRIELNNQNIAKYDTDKNNRINRRKFITYTVLADDLEDATEKLKRAETAIKERLKD IYPINSDDVVKVLSAKERLKLFKTIIDPMNHSNSKYDNRMYFRHGLTSKDFLAEDSADFTDKSIFEWGRYYGQVRFIKDI PTEMTDEFIQDLTAENINMICSIHINPIPKDETKQMIRTKLSFMNTEKFGEKRKLSGKGLGASDEFVAQSLIENLEEAKK IQNKIQEENEKMFVTTFCIMTMAETLDELMDNNYRIDTLCRSHGISLGNLDWEQKAAFNTVLPFGYNRLDVSRQLLSKSL GIFEPFSTQDIYQPGGFVYGVNPTSKSIILLNRLSRKNPSGFIMATPGSGKSMAAKHEIANIFLSTDDDIVIVDPESEYG TLVNRLNGEIITLGQNKGNYINPMELEEQIEIDKNDFVQNEMFENEPDPVSTKIDFLNSFFAMITRINKNSDSSSLTPEE ISTIDVVGRKLYKRCEKENRVPTLNLLYDTLVKEADYTSTRLAQVLQIYVNDGSLNIFSKESNINIKNRVISFDLNSVTQ NLKGVCLLIMLDNVWNRIIQNKKKGKRTWIFIDEFYLMLNNEYSTSFLYQLFKRSRKYDGVITGITQNISDMLRTENART MFNNATGYVCLLNQSEDDLATLTELYGLSKEQQKYIYNASKGKGLIMTEGVTVPFENIIAKDSKLYKLTTSDPNDIKRYR AEDEKIKEDFDKLMEEYKDNKSEDIENQINDKLNKMYDIKYSFHLKSKFKEEKSKVS
Specific function: Unknown
COG id: COG3451
COG function: function code U; Type IV secretory pathway, VirB4 components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 108491; Mature: 108360
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLFKKKNKETKEIATVDAKNKKPKKSKEKENAPLDENVLIAKDVNTTGKLKSNKDIKKK CCCCCCCCCCHHHHEEECCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHH AISKREQEQKLRKSKEKKVKNSKADIYNKKNTSTQSLIGYDRLLSDGTLVIRENLLYSRT HHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHE IEFADINYKLLAEKKQSELFLNYVKFLNTLDENIAYEMSFNNELVSHDKFVKDVNINLKD EEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCEEEECC DGYDEFRIELNNQNIAKYDTDKNNRINRRKFITYTVLADDLEDATEKLKRAETAIKERLK CCCCEEEEEECCCCCEEECCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH DIYPINSDDVVKVLSAKERLKLFKTIIDPMNHSNSKYDNRMYFRHGLTSKDFLAEDSADF HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHCCCCCHHHHCCCCCCC TDKSIFEWGRYYGQVRFIKDIPTEMTDEFIQDLTAENINMICSIHINPIPKDETKQMIRT CHHHHHHHHHHHCEEEEEHHCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHH KLSFMNTEKFGEKRKLSGKGLGASDEFVAQSLIENLEEAKKIQNKIQEENEKMFVTTFCI HHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHH MTMAETLDELMDNNYRIDTLCRSHGISLGNLDWEQKAAFNTVLPFGYNRLDVSRQLLSKS HHHHHHHHHHHCCCCEEHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHH LGIFEPFSTQDIYQPGGFVYGVNPTSKSIILLNRLSRKNPSGFIMATPGSGKSMAAKHEI CCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEHHCCCCCCCEEEECCCCCCCHHHHHHH ANIFLSTDDDIVIVDPESEYGTLVNRLNGEIITLGQNKGNYINPMELEEQIEIDKNDFVQ HEEEEECCCCEEEECCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHCCCHHHHHH NEMFENEPDPVSTKIDFLNSFFAMITRINKNSDSSSLTPEEISTIDVVGRKLYKRCEKEN HHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC RVPTLNLLYDTLVKEADYTSTRLAQVLQIYVNDGSLNIFSKESNINIKNRVISFDLNSVT CCCCHHHHHHHHHHHCCCHHHHHHHHHHHEEECCCEEEEECCCCCCEEHEEEEEEHHHHH QNLKGVCLLIMLDNVWNRIIQNKKKGKRTWIFIDEFYLMLNNEYSTSFLYQLFKRSRKYD HHHHHEEEEEHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHCCCCC GVITGITQNISDMLRTENARTMFNNATGYVCLLNQSEDDLATLTELYGLSKEQQKYIYNA CEEEHHHHHHHHHHHCCCCHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHEEC SKGKGLIMTEGVTVPFENIIAKDSKLYKLTTSDPNDIKRYRAEDEKIKEDFDKLMEEYKD CCCCEEEEECCCCCCHHHHHCCCCCEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHCC NKSEDIENQINDKLNKMYDIKYSFHLKSKFKEEKSKVS CCHHHHHHHHHHHHHHEEEEEEEEEHHHHHHHHHHCCC >Mature Secondary Structure GLFKKKNKETKEIATVDAKNKKPKKSKEKENAPLDENVLIAKDVNTTGKLKSNKDIKKK CCCCCCCCCHHHHEEECCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHH AISKREQEQKLRKSKEKKVKNSKADIYNKKNTSTQSLIGYDRLLSDGTLVIRENLLYSRT HHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHE IEFADINYKLLAEKKQSELFLNYVKFLNTLDENIAYEMSFNNELVSHDKFVKDVNINLKD EEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCEEEECC DGYDEFRIELNNQNIAKYDTDKNNRINRRKFITYTVLADDLEDATEKLKRAETAIKERLK CCCCEEEEEECCCCCEEECCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH DIYPINSDDVVKVLSAKERLKLFKTIIDPMNHSNSKYDNRMYFRHGLTSKDFLAEDSADF HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHCCCCCHHHHCCCCCCC TDKSIFEWGRYYGQVRFIKDIPTEMTDEFIQDLTAENINMICSIHINPIPKDETKQMIRT CHHHHHHHHHHHCEEEEEHHCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHH KLSFMNTEKFGEKRKLSGKGLGASDEFVAQSLIENLEEAKKIQNKIQEENEKMFVTTFCI HHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHH MTMAETLDELMDNNYRIDTLCRSHGISLGNLDWEQKAAFNTVLPFGYNRLDVSRQLLSKS HHHHHHHHHHHCCCCEEHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHH LGIFEPFSTQDIYQPGGFVYGVNPTSKSIILLNRLSRKNPSGFIMATPGSGKSMAAKHEI CCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEHHCCCCCCCEEEECCCCCCCHHHHHHH ANIFLSTDDDIVIVDPESEYGTLVNRLNGEIITLGQNKGNYINPMELEEQIEIDKNDFVQ HEEEEECCCCEEEECCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHCCCHHHHHH NEMFENEPDPVSTKIDFLNSFFAMITRINKNSDSSSLTPEEISTIDVVGRKLYKRCEKEN HHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC RVPTLNLLYDTLVKEADYTSTRLAQVLQIYVNDGSLNIFSKESNINIKNRVISFDLNSVT CCCCHHHHHHHHHHHCCCHHHHHHHHHHHEEECCCEEEEECCCCCCEEHEEEEEEHHHHH QNLKGVCLLIMLDNVWNRIIQNKKKGKRTWIFIDEFYLMLNNEYSTSFLYQLFKRSRKYD HHHHHEEEEEHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHCCCCC GVITGITQNISDMLRTENARTMFNNATGYVCLLNQSEDDLATLTELYGLSKEQQKYIYNA CEEEHHHHHHHHHHHCCCCHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHEEC SKGKGLIMTEGVTVPFENIIAKDSKLYKLTTSDPNDIKRYRAEDEKIKEDFDKLMEEYKD CCCCEEEEECCCCCCHHHHHCCCCCEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHCC NKSEDIENQINDKLNKMYDIKYSFHLKSKFKEEKSKVS CCHHHHHHHHHHHHHHEEEEEEEEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA