| Definition | Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence. |
|---|---|
| Accession | NC_010371 |
| Length | 189,163 |
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The map label for this gene is 169823676
Identifier: 169823676
GI number: 169823676
Start: 160739
End: 161236
Strand: Reverse
Name: 169823676
Synonym: FMG_P0162
Alternate gene names: NA
Gene position: 161236-160739 (Counterclockwise)
Preceding gene: 169823677
Following gene: 169823675
Centisome position: 85.24
GC content: 28.11
Gene sequence:
>498_bases ATGGATTTATCTAGTTTGTATAAGGCTTTTGATGATAACCCCGTTCTTTTCATAGTGGTTGTTTTGGTTTGTGTAAGTCT TTTTTTAACTCTTATAAAATTATTTTTTAAAAGATTAAAGCGAAAATTAAAAATAAACAGATACAAGAATTATGATTTTT CTAAAATAGATTATATGGATGGTATAGAGTTTGAAAATCTGATAGATGCAAAATTTCAAAAGATGGGATATACAACTAAA CTTACAAAAGCTACGAAAGATTATGGGGTAGATTTAATTGCGACAAAAAATAAAAAGTCTATCGCAATTCAGATTAAAAG GTATAACAGGAATGTAGGTGTTAAAGCTATACAAGAGGTTATAGCGGCGAAGGCTTTCTATAAAACAGATACAGCTATGG TGTTAACAAATAGCTATTTTACAAAACCTGCTAAAAATCTTGCTAAAGAAACTAATGTAATTCTAATTGACAGAAGTAAA TTAGCGAAGATTTTGTGA
Upstream 100 bases:
>100_bases AGAAGCTACTTATTTAAGCATTATCCAAATTTATCTATAAAAGATAAAGAGGAAATCTTCGAGATTTTAGACATTTTATG CTACAACAGGGCTAAAAATC
Downstream 100 bases:
>100_bases TAAAATTATATTAAATATATTAGAGGAGTTTAGTGTGAAAAAGAAAAATTTAATGAAGAGAGTTCTTGCTACATCTCTAG CATTGTCAATGTGTATAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Restriction Endonuclease Family Protein; Restriction Endonuclease Family; Type II Restriction Endonuclease Family Protein; Endonuclease; Prophage; Mrr-Like Endonuclease; 5-Methylcytosine-Specific Restriction MRR
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MDLSSLYKAFDDNPVLFIVVVLVCVSLFLTLIKLFFKRLKRKLKINRYKNYDFSKIDYMDGIEFENLIDAKFQKMGYTTK LTKATKDYGVDLIATKNKKSIAIQIKRYNRNVGVKAIQEVIAAKAFYKTDTAMVLTNSYFTKPAKNLAKETNVILIDRSK LAKIL
Sequences:
>Translated_165_residues MDLSSLYKAFDDNPVLFIVVVLVCVSLFLTLIKLFFKRLKRKLKINRYKNYDFSKIDYMDGIEFENLIDAKFQKMGYTTK LTKATKDYGVDLIATKNKKSIAIQIKRYNRNVGVKAIQEVIAAKAFYKTDTAMVLTNSYFTKPAKNLAKETNVILIDRSK LAKIL >Mature_165_residues MDLSSLYKAFDDNPVLFIVVVLVCVSLFLTLIKLFFKRLKRKLKINRYKNYDFSKIDYMDGIEFENLIDAKFQKMGYTTK LTKATKDYGVDLIATKNKKSIAIQIKRYNRNVGVKAIQEVIAAKAFYKTDTAMVLTNSYFTKPAKNLAKETNVILIDRSK LAKIL
Specific function: Unknown
COG id: COG1787
COG function: function code V; Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19028; Mature: 19028
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLSSLYKAFDDNPVLFIVVVLVCVSLFLTLIKLFFKRLKRKLKINRYKNYDFSKIDYMD CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GIEFENLIDAKFQKMGYTTKLTKATKDYGVDLIATKNKKSIAIQIKRYNRNVGVKAIQEV CCCHHHHHHHHHHHCCCHHHHHHHHHHHCEEEEEECCCCEEEEEEEECCCCCCHHHHHHH IAAKAFYKTDTAMVLTNSYFTKPAKNLAKETNVILIDRSKLAKIL HHHHHHHCCCCEEEEECCHHCCHHHHHHHHCCEEEEEHHHHHHCC >Mature Secondary Structure MDLSSLYKAFDDNPVLFIVVVLVCVSLFLTLIKLFFKRLKRKLKINRYKNYDFSKIDYMD CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GIEFENLIDAKFQKMGYTTKLTKATKDYGVDLIATKNKKSIAIQIKRYNRNVGVKAIQEV CCCHHHHHHHHHHHCCCHHHHHHHHHHHCEEEEEECCCCEEEEEEEECCCCCCHHHHHHH IAAKAFYKTDTAMVLTNSYFTKPAKNLAKETNVILIDRSKLAKIL HHHHHHHCCCCEEEEECCHHCCHHHHHHHHCCEEEEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA