Definition Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence.
Accession NC_010371
Length 189,163

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The map label for this gene is 169823676

Identifier: 169823676

GI number: 169823676

Start: 160739

End: 161236

Strand: Reverse

Name: 169823676

Synonym: FMG_P0162

Alternate gene names: NA

Gene position: 161236-160739 (Counterclockwise)

Preceding gene: 169823677

Following gene: 169823675

Centisome position: 85.24

GC content: 28.11

Gene sequence:

>498_bases
ATGGATTTATCTAGTTTGTATAAGGCTTTTGATGATAACCCCGTTCTTTTCATAGTGGTTGTTTTGGTTTGTGTAAGTCT
TTTTTTAACTCTTATAAAATTATTTTTTAAAAGATTAAAGCGAAAATTAAAAATAAACAGATACAAGAATTATGATTTTT
CTAAAATAGATTATATGGATGGTATAGAGTTTGAAAATCTGATAGATGCAAAATTTCAAAAGATGGGATATACAACTAAA
CTTACAAAAGCTACGAAAGATTATGGGGTAGATTTAATTGCGACAAAAAATAAAAAGTCTATCGCAATTCAGATTAAAAG
GTATAACAGGAATGTAGGTGTTAAAGCTATACAAGAGGTTATAGCGGCGAAGGCTTTCTATAAAACAGATACAGCTATGG
TGTTAACAAATAGCTATTTTACAAAACCTGCTAAAAATCTTGCTAAAGAAACTAATGTAATTCTAATTGACAGAAGTAAA
TTAGCGAAGATTTTGTGA

Upstream 100 bases:

>100_bases
AGAAGCTACTTATTTAAGCATTATCCAAATTTATCTATAAAAGATAAAGAGGAAATCTTCGAGATTTTAGACATTTTATG
CTACAACAGGGCTAAAAATC

Downstream 100 bases:

>100_bases
TAAAATTATATTAAATATATTAGAGGAGTTTAGTGTGAAAAAGAAAAATTTAATGAAGAGAGTTCTTGCTACATCTCTAG
CATTGTCAATGTGTATAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Restriction Endonuclease Family Protein; Restriction Endonuclease Family; Type II Restriction Endonuclease Family Protein; Endonuclease; Prophage; Mrr-Like Endonuclease; 5-Methylcytosine-Specific Restriction MRR

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MDLSSLYKAFDDNPVLFIVVVLVCVSLFLTLIKLFFKRLKRKLKINRYKNYDFSKIDYMDGIEFENLIDAKFQKMGYTTK
LTKATKDYGVDLIATKNKKSIAIQIKRYNRNVGVKAIQEVIAAKAFYKTDTAMVLTNSYFTKPAKNLAKETNVILIDRSK
LAKIL

Sequences:

>Translated_165_residues
MDLSSLYKAFDDNPVLFIVVVLVCVSLFLTLIKLFFKRLKRKLKINRYKNYDFSKIDYMDGIEFENLIDAKFQKMGYTTK
LTKATKDYGVDLIATKNKKSIAIQIKRYNRNVGVKAIQEVIAAKAFYKTDTAMVLTNSYFTKPAKNLAKETNVILIDRSK
LAKIL
>Mature_165_residues
MDLSSLYKAFDDNPVLFIVVVLVCVSLFLTLIKLFFKRLKRKLKINRYKNYDFSKIDYMDGIEFENLIDAKFQKMGYTTK
LTKATKDYGVDLIATKNKKSIAIQIKRYNRNVGVKAIQEVIAAKAFYKTDTAMVLTNSYFTKPAKNLAKETNVILIDRSK
LAKIL

Specific function: Unknown

COG id: COG1787

COG function: function code V; Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19028; Mature: 19028

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLSSLYKAFDDNPVLFIVVVLVCVSLFLTLIKLFFKRLKRKLKINRYKNYDFSKIDYMD
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GIEFENLIDAKFQKMGYTTKLTKATKDYGVDLIATKNKKSIAIQIKRYNRNVGVKAIQEV
CCCHHHHHHHHHHHCCCHHHHHHHHHHHCEEEEEECCCCEEEEEEEECCCCCCHHHHHHH
IAAKAFYKTDTAMVLTNSYFTKPAKNLAKETNVILIDRSKLAKIL
HHHHHHHCCCCEEEEECCHHCCHHHHHHHHCCEEEEEHHHHHHCC
>Mature Secondary Structure
MDLSSLYKAFDDNPVLFIVVVLVCVSLFLTLIKLFFKRLKRKLKINRYKNYDFSKIDYMD
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GIEFENLIDAKFQKMGYTTKLTKATKDYGVDLIATKNKKSIAIQIKRYNRNVGVKAIQEV
CCCHHHHHHHHHHHCCCHHHHHHHHHHHCEEEEEECCCCEEEEEEEECCCCCCHHHHHHH
IAAKAFYKTDTAMVLTNSYFTKPAKNLAKETNVILIDRSKLAKIL
HHHHHHHCCCCEEEEECCHHCCHHHHHHHHCCEEEEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA