| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is yaaI [H]
Identifier: 169629643
GI number: 169629643
Start: 2602782
End: 2603363
Strand: Reverse
Name: yaaI [H]
Synonym: MAB_2557c
Alternate gene names: 169629643
Gene position: 2603363-2602782 (Counterclockwise)
Preceding gene: 169629645
Following gene: 169629642
Centisome position: 51.38
GC content: 60.14
Gene sequence:
>582_bases ATGGACCTGGTTGCAACCGCTGCGCAACGGGTACCCCAGGGTATGAGTGAAACTGCGTTGCTCGTCATCGATATGTTCAA TACGTACCGGCATCCCGATGCCGACCAGTTGGCAGCCAACGTTGCGACAATCGTTGAGCCGTTGGCGGGCTTGGTTTCCC GGGCCCAAGCCCACACCGATATGGACCTGATCTACGTGAACGATAACCATGGCGACTTCGCCGCAGGCCCATCCGCCATC GTGGGCGCGGCACTGCACGGCGCCCACCCCGAATTGGTGAGGCCGCTTGTGCCGGAAGGGGAATTCCAGTTTGTGACCAA AGTCAGGCATAGCATTTTCTATGCCTCCCCCTTGGAGTACTTGCTAGGGCGCCTCCGGACGCGGCAATTGATCTTGTGCG GCCAGGTTACAGAGCAGTGCGTGCTCTACAGCGCGCTCGATGCATACGTGCGCCACTTCGATGTGGTTATCCCGACCGAC GCGGTAGCTCCCATCGACCCGTCCCTGGGCGAATCTGCGGTGGAGATGATGCGTCGCAACATGCGCGCCGAACTGTGTAC CAGCACTCGGTGCATCCACTGA
Upstream 100 bases:
>100_bases GGTCGGGTGACCATCCATGGCCGAAGATTGCCCGACTTACGAGACACTAAACTCCCAGTGCCGCAGTTTGCGTGCGCCTC GACGTTCGATACCACCAGAA
Downstream 100 bases:
>100_bases CCACCCCGGCCGACGAGAAAACCGCGCGCCGGCTGGTTTGAACTCCCCGAGTTTGGATATCACCCGGGTCGGAACTAAAC GCAGAACTCCTAGACGACAG
Product: putative isochorismatase hydrolase EntB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MDLVATAAQRVPQGMSETALLVIDMFNTYRHPDADQLAANVATIVEPLAGLVSRAQAHTDMDLIYVNDNHGDFAAGPSAI VGAALHGAHPELVRPLVPEGEFQFVTKVRHSIFYASPLEYLLGRLRTRQLILCGQVTEQCVLYSALDAYVRHFDVVIPTD AVAPIDPSLGESAVEMMRRNMRAELCTSTRCIH
Sequences:
>Translated_193_residues MDLVATAAQRVPQGMSETALLVIDMFNTYRHPDADQLAANVATIVEPLAGLVSRAQAHTDMDLIYVNDNHGDFAAGPSAI VGAALHGAHPELVRPLVPEGEFQFVTKVRHSIFYASPLEYLLGRLRTRQLILCGQVTEQCVLYSALDAYVRHFDVVIPTD AVAPIDPSLGESAVEMMRRNMRAELCTSTRCIH >Mature_193_residues MDLVATAAQRVPQGMSETALLVIDMFNTYRHPDADQLAANVATIVEPLAGLVSRAQAHTDMDLIYVNDNHGDFAAGPSAI VGAALHGAHPELVRPLVPEGEFQFVTKVRHSIFYASPLEYLLGRLRTRQLILCGQVTEQCVLYSALDAYVRHFDVVIPTD AVAPIDPSLGESAVEMMRRNMRAELCTSTRCIH
Specific function: Unknown
COG id: COG1335
COG function: function code Q; Amidases related to nicotinamidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the isochorismatase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000868 [H]
Pfam domain/function: PF00857 Isochorismatase [H]
EC number: NA
Molecular weight: Translated: 21141; Mature: 21141
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLVATAAQRVPQGMSETALLVIDMFNTYRHPDADQLAANVATIVEPLAGLVSRAQAHTD CCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC MDLIYVNDNHGDFAAGPSAIVGAALHGAHPELVRPLVPEGEFQFVTKVRHSIFYASPLEY CEEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHH LLGRLRTRQLILCGQVTEQCVLYSALDAYVRHFDVVIPTDAVAPIDPSLGESAVEMMRRN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCHHHHHHHHHH MRAELCTSTRCIH HHHHHHHHCCCCC >Mature Secondary Structure MDLVATAAQRVPQGMSETALLVIDMFNTYRHPDADQLAANVATIVEPLAGLVSRAQAHTD CCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC MDLIYVNDNHGDFAAGPSAIVGAALHGAHPELVRPLVPEGEFQFVTKVRHSIFYASPLEY CEEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHH LLGRLRTRQLILCGQVTEQCVLYSALDAYVRHFDVVIPTDAVAPIDPSLGESAVEMMRRN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCHHHHHHHHHH MRAELCTSTRCIH HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]