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The map label for this gene is desA1 [H]

Identifier: 169629636

GI number: 169629636

Start: 2596677

End: 2597660

Strand: Reverse

Name: desA1 [H]

Synonym: MAB_2550c

Alternate gene names: 169629636

Gene position: 2597660-2596677 (Counterclockwise)

Preceding gene: 169629638

Following gene: 169629634

Centisome position: 51.26

GC content: 62.91

Gene sequence:

>984_bases
ATGCAGAAGGATTTCACCGACCTCGAGCTGCTGTACGAGCTGGAGCCCGTGGTCGAGGAGAATGTCCACCGCCACCTCGG
TGTCACCAAGGACTGGAACCCGCACGATTACGTCCCGTGGTCGGAGGGCAAGAACTACAAGGCCCTGGGCGGGCAGGACT
GGGATCCGGAGCAGTCCAAGCTCTCCGAGGTCGCCAAGATCGCGATGATCACCAACCTGCTCACCGAGGACAATCTGCCC
TCGTATCACCGCGAGATCGCCATGAACTTCACCATGGACGGCCCGTGGGGCACCTGGGTCAACCGCTGGACCGCCGAGGA
AAACCGGCACGGCATCGCCATCCGCGACTACCTGGTGGTCACCCGCTCGGTGGACCCGGTGGAACTGGAGAAACTGCGCA
TCGCGCAGATGACAAGTGGGTTCTCCCCCGGCCAGAACCGCCAGAACATCCCCTTCTCGGAGAGCCTGTTCGACTCGGTG
GTCTACGTGACCTTCCAGGAGCTGGCCACCCGCGTCTCGCACCGCAACACCGGTAAGGCCTGCGCCGAGCCCGTCGCCGA
CGAGCTGCTCAAGCGCATCTCCACCGACGAGAACCTGCACATGATCTTCTACCGCAACATGGTGTCGGCGGGCCTGGAGA
TTGCCCCTAATCAAGCAGTCAAGGCTGTGCACAAAGTGCTCGACAACTTCACGATGCCCGGCTACACGATTCCGGGGTTC
CGCCGCAATGCCGTCACCATCGCCACCGGCGGTGTCTACGACCCGCAGTCGCACCTCGATGAGGTCGTCATGCCGGTGCT
GCGCAAGTGGCGCATCTTCGAACGCGACGACATCACTGGCGAGGGCGAGTGGTACCGCGAGGATCTGGCACGTGTTGTCA
CCGACCTCAAGAAGACGTCCGCGGACTTCGAAGAGGTCAAGGCCAAGTACCTGGAACGCCAGGCCAAGCGCGCAGAACGC
CAGGCCGCCAAGGTGCTCGTCTAA

Upstream 100 bases:

>100_bases
CCCACAGACCGCCGGAAAGATGGTAGCTTTCTGTAACTGCTGGATACGGGTACTGCTAGTTGCGGTTTCTGTCTGGCCCC
CCGACACAAGGAATGTATCC

Downstream 100 bases:

>100_bases
CGCCAGCCGTATCCGTACCCGACTCCAAAACCGTCATCGCCCGGCCACATCCATGGCGAATAGAAGTCGTCCTCATCGAC
ACTTTGCGTACACGCGGCGT

Product: fatty acid desaturase

Products: NA

Alternate protein names: DES; Putative acyl-ACP desaturase desA1 [H]

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MQKDFTDLELLYELEPVVEENVHRHLGVTKDWNPHDYVPWSEGKNYKALGGQDWDPEQSKLSEVAKIAMITNLLTEDNLP
SYHREIAMNFTMDGPWGTWVNRWTAEENRHGIAIRDYLVVTRSVDPVELEKLRIAQMTSGFSPGQNRQNIPFSESLFDSV
VYVTFQELATRVSHRNTGKACAEPVADELLKRISTDENLHMIFYRNMVSAGLEIAPNQAVKAVHKVLDNFTMPGYTIPGF
RRNAVTIATGGVYDPQSHLDEVVMPVLRKWRIFERDDITGEGEWYREDLARVVTDLKKTSADFEEVKAKYLERQAKRAER
QAAKVLV

Sequences:

>Translated_327_residues
MQKDFTDLELLYELEPVVEENVHRHLGVTKDWNPHDYVPWSEGKNYKALGGQDWDPEQSKLSEVAKIAMITNLLTEDNLP
SYHREIAMNFTMDGPWGTWVNRWTAEENRHGIAIRDYLVVTRSVDPVELEKLRIAQMTSGFSPGQNRQNIPFSESLFDSV
VYVTFQELATRVSHRNTGKACAEPVADELLKRISTDENLHMIFYRNMVSAGLEIAPNQAVKAVHKVLDNFTMPGYTIPGF
RRNAVTIATGGVYDPQSHLDEVVMPVLRKWRIFERDDITGEGEWYREDLARVVTDLKKTSADFEEVKAKYLERQAKRAER
QAAKVLV
>Mature_327_residues
MQKDFTDLELLYELEPVVEENVHRHLGVTKDWNPHDYVPWSEGKNYKALGGQDWDPEQSKLSEVAKIAMITNLLTEDNLP
SYHREIAMNFTMDGPWGTWVNRWTAEENRHGIAIRDYLVVTRSVDPVELEKLRIAQMTSGFSPGQNRQNIPFSESLFDSV
VYVTFQELATRVSHRNTGKACAEPVADELLKRISTDENLHMIFYRNMVSAGLEIAPNQAVKAVHKVLDNFTMPGYTIPGF
RRNAVTIATGGVYDPQSHLDEVVMPVLRKWRIFERDDITGEGEWYREDLARVVTDLKKTSADFEEVKAKYLERQAKRAER
QAAKVLV

Specific function: Could be involved in mycobacterial fatty acid biosynthesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fatty acid desaturase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005067
- InterPro:   IPR009078
- InterPro:   IPR012348 [H]

Pfam domain/function: PF03405 FA_desaturase_2 [H]

EC number: NA

Molecular weight: Translated: 37541; Mature: 37541

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKDFTDLELLYELEPVVEENVHRHLGVTKDWNPHDYVPWSEGKNYKALGGQDWDPEQSK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
LSEVAKIAMITNLLTEDNLPSYHREIAMNFTMDGPWGTWVNRWTAEENRHGIAIRDYLVV
HHHHHHHHHHHHHHHCCCCCHHHHHHEEEEEECCCCHHHHHHHCCCCCCCCEEEEHEEEE
TRSVDPVELEKLRIAQMTSGFSPGQNRQNIPFSESLFDSVVYVTFQELATRVSHRNTGKA
ECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH
CAEPVADELLKRISTDENLHMIFYRNMVSAGLEIAPNQAVKAVHKVLDNFTMPGYTIPGF
HHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
RRNAVTIATGGVYDPQSHLDEVVMPVLRKWRIFERDDITGEGEWYREDLARVVTDLKKTS
CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
ADFEEVKAKYLERQAKRAERQAAKVLV
CCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQKDFTDLELLYELEPVVEENVHRHLGVTKDWNPHDYVPWSEGKNYKALGGQDWDPEQSK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
LSEVAKIAMITNLLTEDNLPSYHREIAMNFTMDGPWGTWVNRWTAEENRHGIAIRDYLVV
HHHHHHHHHHHHHHHCCCCCHHHHHHEEEEEECCCCHHHHHHHCCCCCCCCEEEEHEEEE
TRSVDPVELEKLRIAQMTSGFSPGQNRQNIPFSESLFDSVVYVTFQELATRVSHRNTGKA
ECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH
CAEPVADELLKRISTDENLHMIFYRNMVSAGLEIAPNQAVKAVHKVLDNFTMPGYTIPGF
HHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
RRNAVTIATGGVYDPQSHLDEVVMPVLRKWRIFERDDITGEGEWYREDLARVVTDLKKTS
CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
ADFEEVKAKYLERQAKRAERQAAKVLV
CCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12368430; 12218036 [H]