| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629570
Identifier: 169629570
GI number: 169629570
Start: 2535137
End: 2535973
Strand: Reverse
Name: 169629570
Synonym: MAB_2484c
Alternate gene names: NA
Gene position: 2535973-2535137 (Counterclockwise)
Preceding gene: 169629571
Following gene: 169629569
Centisome position: 50.05
GC content: 66.07
Gene sequence:
>837_bases ATGTGTACTGACGGCCGACGCTGCGAACACTGCCCTGCCCGACGGATCGTCGCGGGGCCCAAAGCCATTGCCGAAGCACT TCCCGCGCTCGGCACGGTGGTCGCCGTCACCGCGAACGATGCCGCCTTATTGAGCCACACGGGCGAATACCTCGAGCCCG CGTTTCCCGGTGAGGCACTCAGCTGCGATGACGAATACATCGCGCTCCGGCTCAACCCAGCGCTTGTCCGCGACGCATTC GTGGCGCCCCGTGCTCTGACAATGGTCGGCGAAACCGGCACGCACCGCGCCTATCTCACGCCGCTGTCGAATCATCTGAC GGTCGGCGCACTCGAGCTCGCACCGGCGCCCGCACCGGAGTCCTTCCCCGTCACCGATTGGCCGGACATCAGCTGGCGTG ACAGCGATCAGCTCATCCATCTCGACGCGCTCACGCCGGCGCGGTACCGGGTGCTCCCCTTTACCGGCGCCCGCAAGATC GACTCCGGGGTGGTGCCCTATCTGTTGGCTCATCTGGTGGATGTGGATATGCCTTTCACCATCGCAGTGCCAGGCGGCGG CTGTGTGCAGTTGCATCGCGGCCACGCGGCCATGGCCGAACAGGCCGGCGCCCACCTCGCGGTTATCTTCGGCGCGTCGC GGTACGCTGTGGACCCCGTCTTCGTCGCAGAAAGCTGGGTGACGCAGGCTCATGGCACACAGGGTGTGACATCCTCCGTG GAGCTGTACGACCACAGCCATCGATGCGTCACCTCCATCACCCAGACCGGGCCGATCACGGCCCGGCTGCACCGAGCCTG GGAGCACATGGTTACCTCACTGCCGGACTGTGCCTGA
Upstream 100 bases:
>100_bases AAGGCGCTGCACGAGATCGTCGGCGAGCACGGCGGATTCAGCGACGATGAGGCCTCCGAATATGTGAATACCCTCAAGCG GGAAAAGCGGTACGTCCGCG
Downstream 100 bases:
>100_bases CTAGCGATAATCCCGATAGCCCGGCCCGCTTCTCACATCTGGCAGCCAGTGCGGTGTGAACAAATTGAGATGTCCCCGTG AATTAGGGGCAGCGTCTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MCTDGRRCEHCPARRIVAGPKAIAEALPALGTVVAVTANDAALLSHTGEYLEPAFPGEALSCDDEYIALRLNPALVRDAF VAPRALTMVGETGTHRAYLTPLSNHLTVGALELAPAPAPESFPVTDWPDISWRDSDQLIHLDALTPARYRVLPFTGARKI DSGVVPYLLAHLVDVDMPFTIAVPGGGCVQLHRGHAAMAEQAGAHLAVIFGASRYAVDPVFVAESWVTQAHGTQGVTSSV ELYDHSHRCVTSITQTGPITARLHRAWEHMVTSLPDCA
Sequences:
>Translated_278_residues MCTDGRRCEHCPARRIVAGPKAIAEALPALGTVVAVTANDAALLSHTGEYLEPAFPGEALSCDDEYIALRLNPALVRDAF VAPRALTMVGETGTHRAYLTPLSNHLTVGALELAPAPAPESFPVTDWPDISWRDSDQLIHLDALTPARYRVLPFTGARKI DSGVVPYLLAHLVDVDMPFTIAVPGGGCVQLHRGHAAMAEQAGAHLAVIFGASRYAVDPVFVAESWVTQAHGTQGVTSSV ELYDHSHRCVTSITQTGPITARLHRAWEHMVTSLPDCA >Mature_278_residues MCTDGRRCEHCPARRIVAGPKAIAEALPALGTVVAVTANDAALLSHTGEYLEPAFPGEALSCDDEYIALRLNPALVRDAF VAPRALTMVGETGTHRAYLTPLSNHLTVGALELAPAPAPESFPVTDWPDISWRDSDQLIHLDALTPARYRVLPFTGARKI DSGVVPYLLAHLVDVDMPFTIAVPGGGCVQLHRGHAAMAEQAGAHLAVIFGASRYAVDPVFVAESWVTQAHGTQGVTSSV ELYDHSHRCVTSITQTGPITARLHRAWEHMVTSLPDCA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29750; Mature: 29750
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCTDGRRCEHCPARRIVAGPKAIAEALPALGTVVAVTANDAALLSHTGEYLEPAFPGEAL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEEECCCCEEHHCCCHHCCCCCCCCCC SCDDEYIALRLNPALVRDAFVAPRALTMVGETGTHRAYLTPLSNHLTVGALELAPAPAPE CCCCCEEEEEECHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCCEEEEEEEECCCCCCC SFPVTDWPDISWRDSDQLIHLDALTPARYRVLPFTGARKIDSGVVPYLLAHLVDVDMPFT CCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEE IAVPGGGCVQLHRGHAAMAEQAGAHLAVIFGASRYAVDPVFVAESWVTQAHGTQGVTSSV EEECCCCEEEEECCCHHHHHHCCCEEEEEECCCHHCCCEEEEHHHHHHHHCCCCCCCCEE ELYDHSHRCVTSITQTGPITARLHRAWEHMVTSLPDCA EECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MCTDGRRCEHCPARRIVAGPKAIAEALPALGTVVAVTANDAALLSHTGEYLEPAFPGEAL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEEECCCCEEHHCCCHHCCCCCCCCCC SCDDEYIALRLNPALVRDAFVAPRALTMVGETGTHRAYLTPLSNHLTVGALELAPAPAPE CCCCCEEEEEECHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCCEEEEEEEECCCCCCC SFPVTDWPDISWRDSDQLIHLDALTPARYRVLPFTGARKIDSGVVPYLLAHLVDVDMPFT CCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEE IAVPGGGCVQLHRGHAAMAEQAGAHLAVIFGASRYAVDPVFVAESWVTQAHGTQGVTSSV EEECCCCEEEEECCCHHHHHHCCCEEEEEECCCHHCCCEEEEHHHHHHHHCCCCCCCCEE ELYDHSHRCVTSITQTGPITARLHRAWEHMVTSLPDCA EECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA