Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_010397 |
Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is ymgE [C]
Identifier: 169629523
GI number: 169629523
Start: 2493681
End: 2493956
Strand: Reverse
Name: ymgE [C]
Synonym: MAB_2437c
Alternate gene names: 169629523
Gene position: 2493956-2493681 (Counterclockwise)
Preceding gene: 169629528
Following gene: 169629518
Centisome position: 49.22
GC content: 60.51
Gene sequence:
>276_bases ATGGTGTTGAACATCATCTGGATGATCATTCTCGGCTTGATCGTCGGCTGGATCGCCCGGCTGATCGTGCCCGGCAAAGA AAACTTCGGCTGGATCGCCACCGCATTGCTCGGCATCATCGGCGGTTACGTCGGCGGGACCCTGGGCAGTCTGGTGTTCG CCCCGCACAAATTCACCGTCACCCCGCCGATCAATCACGCCTTCCTCGGCGCGCTGGTGGGCGCGGTGATTCTGCTGGTC GCCTACAAGTTCATCGCGGGCAAGACCAAAAGCTAG
Upstream 100 bases:
>100_bases GACTGCGCGTCGTAATGGCGCCCCGGCACCGGTATTCCACTAGCATCAGCAACGGGTCGACGCTCGTTTCCTGAAGTACA CATACTCGAAGGAGCTAGAC
Downstream 100 bases:
>100_bases TTTCGGCGACACAGCGGGGCCTGAATTACCGCCAGTTCGCTGGCTTGACCCGTCGACCACCCGCGCCATTGCGCACTTCA CCGTCGGTTTCACAGCTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MVLNIIWMIILGLIVGWIARLIVPGKENFGWIATALLGIIGGYVGGTLGSLVFAPHKFTVTPPINHAFLGALVGAVILLV AYKFIAGKTKS
Sequences:
>Translated_91_residues MVLNIIWMIILGLIVGWIARLIVPGKENFGWIATALLGIIGGYVGGTLGSLVFAPHKFTVTPPINHAFLGALVGAVILLV AYKFIAGKTKS >Mature_91_residues MVLNIIWMIILGLIVGWIARLIVPGKENFGWIATALLGIIGGYVGGTLGSLVFAPHKFTVTPPINHAFLGALVGAVILLV AYKFIAGKTKS
Specific function: Unknown
COG id: COG2261
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9615; Mature: 9615
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLNIIWMIILGLIVGWIARLIVPGKENFGWIATALLGIIGGYVGGTLGSLVFAPHKFTV CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE TPPINHAFLGALVGAVILLVAYKFIAGKTKS CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVLNIIWMIILGLIVGWIARLIVPGKENFGWIATALLGIIGGYVGGTLGSLVFAPHKFTV CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE TPPINHAFLGALVGAVILLVAYKFIAGKTKS CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA