| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629506
Identifier: 169629506
GI number: 169629506
Start: 2478606
End: 2479361
Strand: Reverse
Name: 169629506
Synonym: MAB_2420c
Alternate gene names: NA
Gene position: 2479361-2478606 (Counterclockwise)
Preceding gene: 169629507
Following gene: 169629505
Centisome position: 48.93
GC content: 62.7
Gene sequence:
>756_bases GTGTTGGCCGCCGGATGGCTTGGCCTGGCAACGATGCTCGCGGTCAGTTGTGGCACGCAAAGCGGTGGCATCAAGCCGAT ACCGGTCGGAGCGACCGAGACATCGGCCGCTGCCGATAAGGGTGCGGACGCGGCCATCGCGAGCCCCAAGTCGAGCGCGC CACCGGTAACGACCTCACTTGAGCCGCCGGCACCGGTGATCGTGACACCGGACAAGGCGGAATCGATCATCATTTCCGCT GACGATGCCGGCAGACTGGTCGGCTCCCCGCTGACATACGAGCGCAAGTCCTCCAGCCCGAGCGATTCACTGGCGTCCGG CAAATGTCAGGCACTGACAGGTCTGCGCACCGAGTCACTCGGCGACGAATGGACCACCTACCGGGGTGCTCGCCAACAGG AGACGGAAAAACGCTACGACCACATCGTCTGGCAGTCGGTCGTGCTGTTCCCGGATCCCAAGTCCGCGGCAAGCCAACTA CAGGCGGCCTATCCCCGGTCGTTGTCATCGTGTGCGGGCTCCCGCCAAACCGAGGGCGATGACGAGTGGCAGATCGGTGA CATCGTCAATGACGGCACGAGCGTGAAATGGACACGACAGGAAACCCCGAACGGAAAGCCCTCGGGATGGCGATGCTTCT ACGACTACCGAGTGAAGAACAATGCCCTCTTCGGCAGTCTGTTGTGCCAGAACGGCAACGGCGCTCCGATAGTTTCCGCG ATCGTCGATCGCATGGCGGAGTGGATTCCGGCATGA
Upstream 100 bases:
>100_bases CCGCGGCACACATGTAACACTGGGCGCGAGCGATCCGATGTAGCCATGATTTGGGTCGATCAGAGGCCGATATCACCAGG GAGGGAATGGGATGCGTCAC
Downstream 100 bases:
>100_bases CCGCGGTGACGAACACGGCAGGGGGACTGATGACGATTCCCACCACGAAGAGCAGGGCGCGAACTGTGCTGTGCGTGACC GCAATCGCCGCGCTGGCACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MLAAGWLGLATMLAVSCGTQSGGIKPIPVGATETSAAADKGADAAIASPKSSAPPVTTSLEPPAPVIVTPDKAESIIISA DDAGRLVGSPLTYERKSSSPSDSLASGKCQALTGLRTESLGDEWTTYRGARQQETEKRYDHIVWQSVVLFPDPKSAASQL QAAYPRSLSSCAGSRQTEGDDEWQIGDIVNDGTSVKWTRQETPNGKPSGWRCFYDYRVKNNALFGSLLCQNGNGAPIVSA IVDRMAEWIPA
Sequences:
>Translated_251_residues MLAAGWLGLATMLAVSCGTQSGGIKPIPVGATETSAAADKGADAAIASPKSSAPPVTTSLEPPAPVIVTPDKAESIIISA DDAGRLVGSPLTYERKSSSPSDSLASGKCQALTGLRTESLGDEWTTYRGARQQETEKRYDHIVWQSVVLFPDPKSAASQL QAAYPRSLSSCAGSRQTEGDDEWQIGDIVNDGTSVKWTRQETPNGKPSGWRCFYDYRVKNNALFGSLLCQNGNGAPIVSA IVDRMAEWIPA >Mature_251_residues MLAAGWLGLATMLAVSCGTQSGGIKPIPVGATETSAAADKGADAAIASPKSSAPPVTTSLEPPAPVIVTPDKAESIIISA DDAGRLVGSPLTYERKSSSPSDSLASGKCQALTGLRTESLGDEWTTYRGARQQETEKRYDHIVWQSVVLFPDPKSAASQL QAAYPRSLSSCAGSRQTEGDDEWQIGDIVNDGTSVKWTRQETPNGKPSGWRCFYDYRVKNNALFGSLLCQNGNGAPIVSA IVDRMAEWIPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26518; Mature: 26518
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAAGWLGLATMLAVSCGTQSGGIKPIPVGATETSAAADKGADAAIASPKSSAPPVTTSL CCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHCCCCCCEECCCCCCCCCCCCCC EPPAPVIVTPDKAESIIISADDAGRLVGSPLTYERKSSSPSDSLASGKCQALTGLRTESL CCCCCEEECCCCCCEEEEECCCCCHHCCCCCCCCCCCCCCCCHHHCCCHHHHHCCCHHHC GDEWTTYRGARQQETEKRYDHIVWQSVVLFPDPKSAASQLQAAYPRSLSSCAGSRQTEGD CCHHHHHCCCHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCHHHHHHCCCCCCCCC DEWQIGDIVNDGTSVKWTRQETPNGKPSGWRCFYDYRVKNNALFGSLLCQNGNGAPIVSA CCEEECCEECCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEEEEECCCCCHHHHH IVDRMAEWIPA HHHHHHHHCCC >Mature Secondary Structure MLAAGWLGLATMLAVSCGTQSGGIKPIPVGATETSAAADKGADAAIASPKSSAPPVTTSL CCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHCCCCCCEECCCCCCCCCCCCCC EPPAPVIVTPDKAESIIISADDAGRLVGSPLTYERKSSSPSDSLASGKCQALTGLRTESL CCCCCEEECCCCCCEEEEECCCCCHHCCCCCCCCCCCCCCCCHHHCCCHHHHHCCCHHHC GDEWTTYRGARQQETEKRYDHIVWQSVVLFPDPKSAASQLQAAYPRSLSSCAGSRQTEGD CCHHHHHCCCHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCHHHHHHCCCCCCCCC DEWQIGDIVNDGTSVKWTRQETPNGKPSGWRCFYDYRVKNNALFGSLLCQNGNGAPIVSA CCEEECCEECCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEEEEECCCCCHHHHH IVDRMAEWIPA HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA