Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

Click here to switch to the map view.

The map label for this gene is 169629506

Identifier: 169629506

GI number: 169629506

Start: 2478606

End: 2479361

Strand: Reverse

Name: 169629506

Synonym: MAB_2420c

Alternate gene names: NA

Gene position: 2479361-2478606 (Counterclockwise)

Preceding gene: 169629507

Following gene: 169629505

Centisome position: 48.93

GC content: 62.7

Gene sequence:

>756_bases
GTGTTGGCCGCCGGATGGCTTGGCCTGGCAACGATGCTCGCGGTCAGTTGTGGCACGCAAAGCGGTGGCATCAAGCCGAT
ACCGGTCGGAGCGACCGAGACATCGGCCGCTGCCGATAAGGGTGCGGACGCGGCCATCGCGAGCCCCAAGTCGAGCGCGC
CACCGGTAACGACCTCACTTGAGCCGCCGGCACCGGTGATCGTGACACCGGACAAGGCGGAATCGATCATCATTTCCGCT
GACGATGCCGGCAGACTGGTCGGCTCCCCGCTGACATACGAGCGCAAGTCCTCCAGCCCGAGCGATTCACTGGCGTCCGG
CAAATGTCAGGCACTGACAGGTCTGCGCACCGAGTCACTCGGCGACGAATGGACCACCTACCGGGGTGCTCGCCAACAGG
AGACGGAAAAACGCTACGACCACATCGTCTGGCAGTCGGTCGTGCTGTTCCCGGATCCCAAGTCCGCGGCAAGCCAACTA
CAGGCGGCCTATCCCCGGTCGTTGTCATCGTGTGCGGGCTCCCGCCAAACCGAGGGCGATGACGAGTGGCAGATCGGTGA
CATCGTCAATGACGGCACGAGCGTGAAATGGACACGACAGGAAACCCCGAACGGAAAGCCCTCGGGATGGCGATGCTTCT
ACGACTACCGAGTGAAGAACAATGCCCTCTTCGGCAGTCTGTTGTGCCAGAACGGCAACGGCGCTCCGATAGTTTCCGCG
ATCGTCGATCGCATGGCGGAGTGGATTCCGGCATGA

Upstream 100 bases:

>100_bases
CCGCGGCACACATGTAACACTGGGCGCGAGCGATCCGATGTAGCCATGATTTGGGTCGATCAGAGGCCGATATCACCAGG
GAGGGAATGGGATGCGTCAC

Downstream 100 bases:

>100_bases
CCGCGGTGACGAACACGGCAGGGGGACTGATGACGATTCCCACCACGAAGAGCAGGGCGCGAACTGTGCTGTGCGTGACC
GCAATCGCCGCGCTGGCACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MLAAGWLGLATMLAVSCGTQSGGIKPIPVGATETSAAADKGADAAIASPKSSAPPVTTSLEPPAPVIVTPDKAESIIISA
DDAGRLVGSPLTYERKSSSPSDSLASGKCQALTGLRTESLGDEWTTYRGARQQETEKRYDHIVWQSVVLFPDPKSAASQL
QAAYPRSLSSCAGSRQTEGDDEWQIGDIVNDGTSVKWTRQETPNGKPSGWRCFYDYRVKNNALFGSLLCQNGNGAPIVSA
IVDRMAEWIPA

Sequences:

>Translated_251_residues
MLAAGWLGLATMLAVSCGTQSGGIKPIPVGATETSAAADKGADAAIASPKSSAPPVTTSLEPPAPVIVTPDKAESIIISA
DDAGRLVGSPLTYERKSSSPSDSLASGKCQALTGLRTESLGDEWTTYRGARQQETEKRYDHIVWQSVVLFPDPKSAASQL
QAAYPRSLSSCAGSRQTEGDDEWQIGDIVNDGTSVKWTRQETPNGKPSGWRCFYDYRVKNNALFGSLLCQNGNGAPIVSA
IVDRMAEWIPA
>Mature_251_residues
MLAAGWLGLATMLAVSCGTQSGGIKPIPVGATETSAAADKGADAAIASPKSSAPPVTTSLEPPAPVIVTPDKAESIIISA
DDAGRLVGSPLTYERKSSSPSDSLASGKCQALTGLRTESLGDEWTTYRGARQQETEKRYDHIVWQSVVLFPDPKSAASQL
QAAYPRSLSSCAGSRQTEGDDEWQIGDIVNDGTSVKWTRQETPNGKPSGWRCFYDYRVKNNALFGSLLCQNGNGAPIVSA
IVDRMAEWIPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26518; Mature: 26518

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAAGWLGLATMLAVSCGTQSGGIKPIPVGATETSAAADKGADAAIASPKSSAPPVTTSL
CCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHCCCCCCEECCCCCCCCCCCCCC
EPPAPVIVTPDKAESIIISADDAGRLVGSPLTYERKSSSPSDSLASGKCQALTGLRTESL
CCCCCEEECCCCCCEEEEECCCCCHHCCCCCCCCCCCCCCCCHHHCCCHHHHHCCCHHHC
GDEWTTYRGARQQETEKRYDHIVWQSVVLFPDPKSAASQLQAAYPRSLSSCAGSRQTEGD
CCHHHHHCCCHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCHHHHHHCCCCCCCCC
DEWQIGDIVNDGTSVKWTRQETPNGKPSGWRCFYDYRVKNNALFGSLLCQNGNGAPIVSA
CCEEECCEECCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEEEEECCCCCHHHHH
IVDRMAEWIPA
HHHHHHHHCCC
>Mature Secondary Structure
MLAAGWLGLATMLAVSCGTQSGGIKPIPVGATETSAAADKGADAAIASPKSSAPPVTTSL
CCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHCCCCCCEECCCCCCCCCCCCCC
EPPAPVIVTPDKAESIIISADDAGRLVGSPLTYERKSSSPSDSLASGKCQALTGLRTESL
CCCCCEEECCCCCCEEEEECCCCCHHCCCCCCCCCCCCCCCCHHHCCCHHHHHCCCHHHC
GDEWTTYRGARQQETEKRYDHIVWQSVVLFPDPKSAASQLQAAYPRSLSSCAGSRQTEGD
CCHHHHHCCCHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCHHHHHHCCCCCCCCC
DEWQIGDIVNDGTSVKWTRQETPNGKPSGWRCFYDYRVKNNALFGSLLCQNGNGAPIVSA
CCEEECCEECCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEEEEECCCCCHHHHH
IVDRMAEWIPA
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA