| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629462
Identifier: 169629462
GI number: 169629462
Start: 2433037
End: 2434122
Strand: Reverse
Name: 169629462
Synonym: MAB_2376c
Alternate gene names: NA
Gene position: 2434122-2433037 (Counterclockwise)
Preceding gene: 169629464
Following gene: 169629460
Centisome position: 48.04
GC content: 67.68
Gene sequence:
>1086_bases GTGTCCGATACACGATTGGCCGCGCTCACGGCGCGTGTCGAGTACACCGATCCAATGATGCGAGCCCGTACGGCGATCGT CGGCGGTCTCGTCTTGCTGGGGCCGACCCTGCTGGTCGTCCTCAAAGTGCTCGACGCTGCGCCTGCGGCGATCATTTCTG CCTGTAGTGCCGCGCTCACGCTGGCCTATGTACTGCGGTTCTTCGGACCAGCCGCCAGCCGCCGGGCGTCGGTGCGGCTG GGCATCATCGATGACCATGTGGTGATCGGCGACGAGGTCATCGGCCACCAGGATCTCGTGCGCCCGCTGGCAGAGGTCGT ATCCGTCGAGATCAGCGACGCGCTGGCCGACCGCACCCTGATACATCCCGACGCCGGGGTGTATCAAGTCATGGGCTCGG AGTACCTCACGATCGGGTTCCAGTCCCGCGATGTCGGCTCATCGACCTCGGTGCAGACGGTTAAGGTGGCGGCAAACGCG TCTGATCCAGTGGCGGAGACCATCATCGAAGCGCTGCGTGACGCCGCGCCCACCGACGTGAAGCCGGCGACCGAATCGGT GCTGTCCCCTGCCGCAGCCTCACCGGCAGCCGACGAGCGGCTGTGGGGCGTCGCCCGCCAGATTCACGATTCGGTGCTCA CCGAATACGGCCGCTACGAACTCGACCCGGCGCTGTTCCTGCGCTACCCGGGTGTCACCGACGTGACCCGCGGACCGGTG ATGGACTTCCAGATTGCCCTGGCCGAGGCGCAGGCGCTGCGCACCGATGCCTATCCTGGCGATCCTGCCCTTGCCGGCCG TTACCGTGCCGCGGCCGACACCCTGCGTCGGGCCTGGGTGCGCTGCGAAGCCGATGGCAAATCAGCTGCACTCGATGATC TTCCGGCGGCGGCTCGCGCCGACCTCACCACCGCAGGCAAGCTGCTGGCCCACGCCGAGGGCACCACGCACGGTGCTGAG AAGGCTGCCTACCTGCGACGTGTGCAAGACACCGTGGCCCGGTTGACCGACCGTGGCGTCCTGCACCCACCGCTGCAAGT CCTAGCAGCGATCGAGGCCGCCGCCCGTCGGGCGCTGGAGCCCTGA
Upstream 100 bases:
>100_bases TCGGCAGTGCGTGATTCCACTGCGCGGCAGCGTACGCGGGCCAAGATGAGAGGATCGAATTTCCGGTAGTGCCATACTCG TACAGCGGAGGTGCCTGCCC
Downstream 100 bases:
>100_bases CCGTCAGCTTTCCGCGCCGAGGTACTGACCTGTGCGCAGCTCGTAAAGCAAGCTGTCCTCGGAGTCTGCATGGCTGTATT CCACCCGCGCCACCGGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MSDTRLAALTARVEYTDPMMRARTAIVGGLVLLGPTLLVVLKVLDAAPAAIISACSAALTLAYVLRFFGPAASRRASVRL GIIDDHVVIGDEVIGHQDLVRPLAEVVSVEISDALADRTLIHPDAGVYQVMGSEYLTIGFQSRDVGSSTSVQTVKVAANA SDPVAETIIEALRDAAPTDVKPATESVLSPAAASPAADERLWGVARQIHDSVLTEYGRYELDPALFLRYPGVTDVTRGPV MDFQIALAEAQALRTDAYPGDPALAGRYRAAADTLRRAWVRCEADGKSAALDDLPAAARADLTTAGKLLAHAEGTTHGAE KAAYLRRVQDTVARLTDRGVLHPPLQVLAAIEAAARRALEP
Sequences:
>Translated_361_residues MSDTRLAALTARVEYTDPMMRARTAIVGGLVLLGPTLLVVLKVLDAAPAAIISACSAALTLAYVLRFFGPAASRRASVRL GIIDDHVVIGDEVIGHQDLVRPLAEVVSVEISDALADRTLIHPDAGVYQVMGSEYLTIGFQSRDVGSSTSVQTVKVAANA SDPVAETIIEALRDAAPTDVKPATESVLSPAAASPAADERLWGVARQIHDSVLTEYGRYELDPALFLRYPGVTDVTRGPV MDFQIALAEAQALRTDAYPGDPALAGRYRAAADTLRRAWVRCEADGKSAALDDLPAAARADLTTAGKLLAHAEGTTHGAE KAAYLRRVQDTVARLTDRGVLHPPLQVLAAIEAAARRALEP >Mature_360_residues SDTRLAALTARVEYTDPMMRARTAIVGGLVLLGPTLLVVLKVLDAAPAAIISACSAALTLAYVLRFFGPAASRRASVRLG IIDDHVVIGDEVIGHQDLVRPLAEVVSVEISDALADRTLIHPDAGVYQVMGSEYLTIGFQSRDVGSSTSVQTVKVAANAS DPVAETIIEALRDAAPTDVKPATESVLSPAAASPAADERLWGVARQIHDSVLTEYGRYELDPALFLRYPGVTDVTRGPVM DFQIALAEAQALRTDAYPGDPALAGRYRAAADTLRRAWVRCEADGKSAALDDLPAAARADLTTAGKLLAHAEGTTHGAEK AAYLRRVQDTVARLTDRGVLHPPLQVLAAIEAAARRALEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38197; Mature: 38066
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTRLAALTARVEYTDPMMRARTAIVGGLVLLGPTLLVVLKVLDAAPAAIISACSAALT CCCCCEEHHEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LAYVLRFFGPAASRRASVRLGIIDDHVVIGDEVIGHQDLVRPLAEVVSVEISDALADRTL HHHHHHHHCCCCCCCCEEEEEEECCCEEECCHHHCHHHHHHHHHHHHHHHHHHHHHCCEE IHPDAGVYQVMGSEYLTIGFQSRDVGSSTSVQTVKVAANASDPVAETIIEALRDAAPTDV ECCCCCHHHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCC KPATESVLSPAAASPAADERLWGVARQIHDSVLTEYGRYELDPALFLRYPGVTDVTRGPV CHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCCCCCCCCCC MDFQIALAEAQALRTDAYPGDPALAGRYRAAADTLRRAWVRCEADGKSAALDDLPAAARA HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCHHHCCCHHHC DLTTAGKLLAHAEGTTHGAEKAAYLRRVQDTVARLTDRGVLHPPLQVLAAIEAAARRALE CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC P C >Mature Secondary Structure SDTRLAALTARVEYTDPMMRARTAIVGGLVLLGPTLLVVLKVLDAAPAAIISACSAALT CCCCEEHHEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LAYVLRFFGPAASRRASVRLGIIDDHVVIGDEVIGHQDLVRPLAEVVSVEISDALADRTL HHHHHHHHCCCCCCCCEEEEEEECCCEEECCHHHCHHHHHHHHHHHHHHHHHHHHHCCEE IHPDAGVYQVMGSEYLTIGFQSRDVGSSTSVQTVKVAANASDPVAETIIEALRDAAPTDV ECCCCCHHHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCC KPATESVLSPAAASPAADERLWGVARQIHDSVLTEYGRYELDPALFLRYPGVTDVTRGPV CHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCCCCCCCCCC MDFQIALAEAQALRTDAYPGDPALAGRYRAAADTLRRAWVRCEADGKSAALDDLPAAARA HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCHHHCCCHHHC DLTTAGKLLAHAEGTTHGAEKAAYLRRVQDTVARLTDRGVLHPPLQVLAAIEAAARRALE CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC P C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA