| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629433
Identifier: 169629433
GI number: 169629433
Start: 2401390
End: 2402766
Strand: Reverse
Name: 169629433
Synonym: MAB_2347c
Alternate gene names: NA
Gene position: 2402766-2401390 (Counterclockwise)
Preceding gene: 169629436
Following gene: 169629419
Centisome position: 47.42
GC content: 59.77
Gene sequence:
>1377_bases GTGGGGAATCTGTTGCTGCGGCCACTACGCCTCTGGGTGATGTATCTGCCTCAGCTGGCTGCGTGTTATCTGCTGGGCCT GCTGGGCCGAAACATTGCGATCGAGTTAGCGGCGCAGTTCGGCTGGAAGAACTATCTGTGGGCGGACCTGCTGATGCCTT TCGCCGGTCTGGCCCGGCTCGGCTCTATCGTCGCCATGTTCCTGGTCCTGCGGTCCGCAATTCCCTCACTGGCCGCCACG CCGAGAGCGTCGTTGAAGAATCTCGATCTGTTCGCAAATGTCGTGCTGCCCTTCTTCGCCATCTACCTGGCCTGGCAGAT GTTTGCCGATGACTGGATCGCCTTCGAGAGAAAAGTCGGACTTCACCGAGAGGCCGCGTACGTGCCTGGCCAAGGCAGTG ACCTCGATCCATCAAATCTGCCGGTTAGCAACATTGTTTGGTACCTGATCGTGGGCGCCTTTGTGCTCAGATTCCTTCTG AAGGTCAAGCCGATTAAGGAACGCCTGCCCGCATGGTTTGTGCTGATACAGGTCTATTTGGACGCGCTGTGGGTCTTTCT CGTGCTGACGTTTTCTGCGAGCAAGGGGTTGACCTTCTTCCTGAAGCCGGCTTCGTGGTTCAAGGAGCGGCGAGTTGTGG TCTGGGCGGAGACGACGCGCGCGGAGCTCTTCTCCCACTTCCGTCCGCTGGAAATAGTGTGGAACATATTGACCGATGCG TTGAGTACCGCTTTCAGTGGCGCGGGCGTTCCGCTGATCTGGCTGGCCATCGCCGGAATCATCTACGGCTCGTCGAATCA GACGAGTTGGCGCGGCGTGCTGCGGACGGTCGTCGGCGCTCAAGGCGACCTGGTGGCGGACCGGCTGGCACCTACCGCGG ATCGTGTGCAAAGCCGCCTGTCCGGCGTATCCGAGGGCGCGCGCAGCAAAACCCGCGAACTTGCCATGTCGCAGTTCGGA AAATTCCGGCCCATAGTCGATTCGGCGCGCTTGGTGTTACATGGCGGCTTTGTGGTGATTGCGACATACGTGCTGTTGTA CTTGTGTTTGTCGTGGCTGGATATGGCCGATAGTTTTTATCGGCCCCAGATGCAGATCGGCGGATACCTGACCCGTGGGT TCGCATGGCTACTGGGCCCGCACCCCGACTATTTCTGGACGGGAGTCGGGCCGATCCTGGCCGCGCTCTCCGGCATACTC GTTGCGACACTAAGGGTCTGCTTGATCGCGTCGGTATTCGCGCATTGCGTGGAACGTACCGAGGACCAACTGAAACCTGC GCCCGTCGCTGCTTCAGATGACGTGCTCGACTACCCGGACCCGCACAATCAAAGCCAACTGGCGCCGCCAGGGCCTAGTC AGGGATATTCAGCCTGA
Upstream 100 bases:
>100_bases AGGGCCTGCACATCCTGTCACAATGGGCGGATCGGGCAGACCAAATCCCTGTCACCCGGATCGGGGGCGGCAGCCTCACC TGAACCTCTACGATGACGCG
Downstream 100 bases:
>100_bases CCGAGATCCGGTCGCCATCCATGATCTCGACGGCGGTGGCCTGTGTCTGCTCGGGCAGAACGAACGCGAACTGTAGGGAA CCGGGTTTGGAGCACATATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 458; Mature: 457
Protein sequence:
>458_residues MGNLLLRPLRLWVMYLPQLAACYLLGLLGRNIAIELAAQFGWKNYLWADLLMPFAGLARLGSIVAMFLVLRSAIPSLAAT PRASLKNLDLFANVVLPFFAIYLAWQMFADDWIAFERKVGLHREAAYVPGQGSDLDPSNLPVSNIVWYLIVGAFVLRFLL KVKPIKERLPAWFVLIQVYLDALWVFLVLTFSASKGLTFFLKPASWFKERRVVVWAETTRAELFSHFRPLEIVWNILTDA LSTAFSGAGVPLIWLAIAGIIYGSSNQTSWRGVLRTVVGAQGDLVADRLAPTADRVQSRLSGVSEGARSKTRELAMSQFG KFRPIVDSARLVLHGGFVVIATYVLLYLCLSWLDMADSFYRPQMQIGGYLTRGFAWLLGPHPDYFWTGVGPILAALSGIL VATLRVCLIASVFAHCVERTEDQLKPAPVAASDDVLDYPDPHNQSQLAPPGPSQGYSA
Sequences:
>Translated_458_residues MGNLLLRPLRLWVMYLPQLAACYLLGLLGRNIAIELAAQFGWKNYLWADLLMPFAGLARLGSIVAMFLVLRSAIPSLAAT PRASLKNLDLFANVVLPFFAIYLAWQMFADDWIAFERKVGLHREAAYVPGQGSDLDPSNLPVSNIVWYLIVGAFVLRFLL KVKPIKERLPAWFVLIQVYLDALWVFLVLTFSASKGLTFFLKPASWFKERRVVVWAETTRAELFSHFRPLEIVWNILTDA LSTAFSGAGVPLIWLAIAGIIYGSSNQTSWRGVLRTVVGAQGDLVADRLAPTADRVQSRLSGVSEGARSKTRELAMSQFG KFRPIVDSARLVLHGGFVVIATYVLLYLCLSWLDMADSFYRPQMQIGGYLTRGFAWLLGPHPDYFWTGVGPILAALSGIL VATLRVCLIASVFAHCVERTEDQLKPAPVAASDDVLDYPDPHNQSQLAPPGPSQGYSA >Mature_457_residues GNLLLRPLRLWVMYLPQLAACYLLGLLGRNIAIELAAQFGWKNYLWADLLMPFAGLARLGSIVAMFLVLRSAIPSLAATP RASLKNLDLFANVVLPFFAIYLAWQMFADDWIAFERKVGLHREAAYVPGQGSDLDPSNLPVSNIVWYLIVGAFVLRFLLK VKPIKERLPAWFVLIQVYLDALWVFLVLTFSASKGLTFFLKPASWFKERRVVVWAETTRAELFSHFRPLEIVWNILTDAL STAFSGAGVPLIWLAIAGIIYGSSNQTSWRGVLRTVVGAQGDLVADRLAPTADRVQSRLSGVSEGARSKTRELAMSQFGK FRPIVDSARLVLHGGFVVIATYVLLYLCLSWLDMADSFYRPQMQIGGYLTRGFAWLLGPHPDYFWTGVGPILAALSGILV ATLRVCLIASVFAHCVERTEDQLKPAPVAASDDVLDYPDPHNQSQLAPPGPSQGYSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50764; Mature: 50633
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNLLLRPLRLWVMYLPQLAACYLLGLLGRNIAIELAAQFGWKNYLWADLLMPFAGLARL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH GSIVAMFLVLRSAIPSLAATPRASLKNLDLFANVVLPFFAIYLAWQMFADDWIAFERKVG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LHREAAYVPGQGSDLDPSNLPVSNIVWYLIVGAFVLRFLLKVKPIKERLPAWFVLIQVYL CCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH DALWVFLVLTFSASKGLTFFLKPASWFKERRVVVWAETTRAELFSHFRPLEIVWNILTDA HHHHHHHHHHHHCCCCCEEEECCHHHHHCCCEEEEECHHHHHHHHHCCHHHHHHHHHHHH LSTAFSGAGVPLIWLAIAGIIYGSSNQTSWRGVLRTVVGAQGDLVADRLAPTADRVQSRL HHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHH SGVSEGARSKTRELAMSQFGKFRPIVDSARLVLHGGFVVIATYVLLYLCLSWLDMADSFY HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC RPQMQIGGYLTRGFAWLLGPHPDYFWTGVGPILAALSGILVATLRVCLIASVFAHCVERT CCHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EDQLKPAPVAASDDVLDYPDPHNQSQLAPPGPSQGYSA HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GNLLLRPLRLWVMYLPQLAACYLLGLLGRNIAIELAAQFGWKNYLWADLLMPFAGLARL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH GSIVAMFLVLRSAIPSLAATPRASLKNLDLFANVVLPFFAIYLAWQMFADDWIAFERKVG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LHREAAYVPGQGSDLDPSNLPVSNIVWYLIVGAFVLRFLLKVKPIKERLPAWFVLIQVYL CCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH DALWVFLVLTFSASKGLTFFLKPASWFKERRVVVWAETTRAELFSHFRPLEIVWNILTDA HHHHHHHHHHHHCCCCCEEEECCHHHHHCCCEEEEECHHHHHHHHHCCHHHHHHHHHHHH LSTAFSGAGVPLIWLAIAGIIYGSSNQTSWRGVLRTVVGAQGDLVADRLAPTADRVQSRL HHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHH SGVSEGARSKTRELAMSQFGKFRPIVDSARLVLHGGFVVIATYVLLYLCLSWLDMADSFY HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC RPQMQIGGYLTRGFAWLLGPHPDYFWTGVGPILAALSGILVATLRVCLIASVFAHCVERT CCHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EDQLKPAPVAASDDVLDYPDPHNQSQLAPPGPSQGYSA HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA