Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is napA [H]
Identifier: 169629371
GI number: 169629371
Start: 2333733
End: 2335052
Strand: Direct
Name: napA [H]
Synonym: MAB_2285
Alternate gene names: 169629371
Gene position: 2333733-2335052 (Clockwise)
Preceding gene: 169629370
Following gene: 169629372
Centisome position: 46.06
GC content: 64.24
Gene sequence:
>1320_bases GTGAGTAACACAGCGGTGACCGCCGCGGCGGCCTTGTCCAAGGACGTATCCCTGATCTTCTTTGCAGACCTGGTCATCTT GCTGGTGGCGGCCCTGGCGTGCGGTGCCGTCGCCGGCAAGATCGGACTACCCAAAATGGTCGGCGAGATCGCCGCAGGTG TTCTCCTGGGCCCCACAGTGTTCGGCAGGTTGTTCCCCGAAACCAAAGATGCGCTGTTTCCCTCCGCCGGGACCGGCTCG GAAATAATCTCCGGACTGTGCCTGCTGGCGGTGGTGTTGTTGGTCGGCGTCGCGGGCATGCACGTCGACGTCGATAAGCT CAAACAACGGCTGGCCGGTATCGCCACGATCAGCGTGCTCGGGCTCGCCGTACCGCTGGCCGGGGGCATGGCCGTCGGAT ATCTGGTTCCCGAGCCGTTGCGTCCGGCTGCCGTCGATCGCACCGTGTTCGCGTTGTTCTTGGGCACGGCGGTCGCGGTC TCCGCGATACCGGTTATTGCCCGGATCCTGATGGACCTGGGCTTGGCATCGCACGAGATCGCTCAGGTGATCCTGGCCGC CGCGATTGTCGATGATGTCGCCGGATGGCTGCTGCTGTCGGCAGTCACCGGCATGGCGTCCGACTCCGGAACTGGAGGCG TTGCCGTGCTGAAAATGGCTGTCGCAGCCATCGTCGCGGTGGTCGCACTCACCGCACTTACCCGCCCTGCGCTACGAAAT CGGTTGGCGCGCCGATGCTCTCGATGGAGTGCCCCAACATCCACCACCGTCACCGTGGCCACTATCATCGTGTGCGCCAC CGCCGGACAACTGCTGGGTTTTGAACCCGTCATCGGAGCCTTCTTCGCGGGCATCCTGGTCATCGCGGCGACACCGGCCG GAAGCCGAGTGCATAAACCGCTGCACGCCATGGCTGTTGCGTTCTTCGGACCGATCTTCTTCGCGACCATCGGGCTGCAA CTGGACCTGGGAAGGCTGCTTTCCGGACCGGTGCTGGCGCTGACCGCCTCCATATGTGTGGTGGCGGTTTTCTCGAAATT CCTGGGTGCGGGCATGGGCGCCAGAATCAGCGGATTCAGCTGGCCCGAGTCCGTAGCGGTGGGCGCAGGACTGAACACCC GTGGCGTCATCCAGATCGTGATTGCCATGGTCGGGGTGCGATGCGGGGTGTTCAGCCCCGAGGTGTTCACCGCACTCGTC GTCACCACCATCGCCACGACCGCGATTGCGGGCCCGGTCCTCAAACGCACACTGACACCCCGCCGACAGCTGCCGGCGGT GATATCGAAACCCCCGCAAGAGCCCGCGCTCAACCGATAA
Upstream 100 bases:
>100_bases AGTTCTACGGCGGTACCGTCAAATCCGGCGTCCGCGACGCGAACCACGCCATACGGGACATGGTGACCTCAAGAAACAGC GACTGGAAGTAGCCCCGGTC
Downstream 100 bases:
>100_bases ATGCCTGCAAAAAGGGAAGTGATAGCCGTGCCTGAGAAAACCGCCAACATCGGCGACCCTGTCGTCGCCATCGCCTCATA TGCCGACCACCCCAGCGCCT
Product: Na+/H+ antiporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MSNTAVTAAAALSKDVSLIFFADLVILLVAALACGAVAGKIGLPKMVGEIAAGVLLGPTVFGRLFPETKDALFPSAGTGS EIISGLCLLAVVLLVGVAGMHVDVDKLKQRLAGIATISVLGLAVPLAGGMAVGYLVPEPLRPAAVDRTVFALFLGTAVAV SAIPVIARILMDLGLASHEIAQVILAAAIVDDVAGWLLLSAVTGMASDSGTGGVAVLKMAVAAIVAVVALTALTRPALRN RLARRCSRWSAPTSTTVTVATIIVCATAGQLLGFEPVIGAFFAGILVIAATPAGSRVHKPLHAMAVAFFGPIFFATIGLQ LDLGRLLSGPVLALTASICVVAVFSKFLGAGMGARISGFSWPESVAVGAGLNTRGVIQIVIAMVGVRCGVFSPEVFTALV VTTIATTAIAGPVLKRTLTPRRQLPAVISKPPQEPALNR
Sequences:
>Translated_439_residues MSNTAVTAAAALSKDVSLIFFADLVILLVAALACGAVAGKIGLPKMVGEIAAGVLLGPTVFGRLFPETKDALFPSAGTGS EIISGLCLLAVVLLVGVAGMHVDVDKLKQRLAGIATISVLGLAVPLAGGMAVGYLVPEPLRPAAVDRTVFALFLGTAVAV SAIPVIARILMDLGLASHEIAQVILAAAIVDDVAGWLLLSAVTGMASDSGTGGVAVLKMAVAAIVAVVALTALTRPALRN RLARRCSRWSAPTSTTVTVATIIVCATAGQLLGFEPVIGAFFAGILVIAATPAGSRVHKPLHAMAVAFFGPIFFATIGLQ LDLGRLLSGPVLALTASICVVAVFSKFLGAGMGARISGFSWPESVAVGAGLNTRGVIQIVIAMVGVRCGVFSPEVFTALV VTTIATTAIAGPVLKRTLTPRRQLPAVISKPPQEPALNR >Mature_438_residues SNTAVTAAAALSKDVSLIFFADLVILLVAALACGAVAGKIGLPKMVGEIAAGVLLGPTVFGRLFPETKDALFPSAGTGSE IISGLCLLAVVLLVGVAGMHVDVDKLKQRLAGIATISVLGLAVPLAGGMAVGYLVPEPLRPAAVDRTVFALFLGTAVAVS AIPVIARILMDLGLASHEIAQVILAAAIVDDVAGWLLLSAVTGMASDSGTGGVAVLKMAVAAIVAVVALTALTRPALRNR LARRCSRWSAPTSTTVTVATIIVCATAGQLLGFEPVIGAFFAGILVIAATPAGSRVHKPLHAMAVAFFGPIFFATIGLQL DLGRLLSGPVLALTASICVVAVFSKFLGAGMGARISGFSWPESVAVGAGLNTRGVIQIVIAMVGVRCGVFSPEVFTALVV TTIATTAIAGPVLKRTLTPRRQLPAVISKPPQEPALNR
Specific function: This is a Na(+)/H(+) antiporter. It can mediate sodium uptake when a transmembrane pH gradient is applied [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322367, Length=422, Percent_Identity=28.1990521327014, Blast_Score=154, Evalue=2e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 44496; Mature: 44365
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNTAVTAAAALSKDVSLIFFADLVILLVAALACGAVAGKIGLPKMVGEIAAGVLLGPTV CCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FGRLFPETKDALFPSAGTGSEIISGLCLLAVVLLVGVAGMHVDVDKLKQRLAGIATISVL HHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH GLAVPLAGGMAVGYLVPEPLRPAAVDRTVFALFLGTAVAVSAIPVIARILMDLGLASHEI HHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AQVILAAAIVDDVAGWLLLSAVTGMASDSGTGGVAVLKMAVAAIVAVVALTALTRPALRN HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLARRCSRWSAPTSTTVTVATIIVCATAGQLLGFEPVIGAFFAGILVIAATPAGSRVHKP HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHH LHAMAVAFFGPIFFATIGLQLDLGRLLSGPVLALTASICVVAVFSKFLGAGMGARISGFS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC WPESVAVGAGLNTRGVIQIVIAMVGVRCGVFSPEVFTALVVTTIATTAIAGPVLKRTLTP CCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC RRQLPAVISKPPQEPALNR HHHCCHHHCCCCCCCCCCC >Mature Secondary Structure SNTAVTAAAALSKDVSLIFFADLVILLVAALACGAVAGKIGLPKMVGEIAAGVLLGPTV CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FGRLFPETKDALFPSAGTGSEIISGLCLLAVVLLVGVAGMHVDVDKLKQRLAGIATISVL HHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH GLAVPLAGGMAVGYLVPEPLRPAAVDRTVFALFLGTAVAVSAIPVIARILMDLGLASHEI HHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AQVILAAAIVDDVAGWLLLSAVTGMASDSGTGGVAVLKMAVAAIVAVVALTALTRPALRN HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLARRCSRWSAPTSTTVTVATIIVCATAGQLLGFEPVIGAFFAGILVIAATPAGSRVHKP HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHH LHAMAVAFFGPIFFATIGLQLDLGRLLSGPVLALTASICVVAVFSKFLGAGMGARISGFS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC WPESVAVGAGLNTRGVIQIVIAMVGVRCGVFSPEVFTALVVTTIATTAIAGPVLKRTLTP CCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC RRQLPAVISKPPQEPALNR HHHCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1312090; 1325937 [H]