| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629354
Identifier: 169629354
GI number: 169629354
Start: 2314707
End: 2316350
Strand: Reverse
Name: 169629354
Synonym: MAB_2268c
Alternate gene names: NA
Gene position: 2316350-2314707 (Counterclockwise)
Preceding gene: 169629355
Following gene: 169629353
Centisome position: 45.71
GC content: 68.55
Gene sequence:
>1644_bases GTGACCCCGCCCGCGCCTGAATCACCGGACCCGCTTCCGCAGATCGCCCGGGCTCGCTCCATCCTGTTCTCCGCGCCACC CGCGGGACGGCGCTGGAGCATCGGGCTACGCGCTGCGGCCGCCGTCGCCATACCCGGGACGCTGGTGGTTGCTGCCGGCT ACCCGAATGCCGCGCTCTACGTCACCTATGGGGCGTTCGCGGTCCTGTACGGCGAGGGCCGCCCCTACCGGGTGCGCGCC GCCGTGGTGGCGACCGCCGGTATCGCCCTGATGCTCGTCACCGCAGTCGGCGTGGTCGTGGGTAGCTGCGCACCAGGTGG TGTGACCAACAAGGCTGCGACCATTCTGACCCTGGCGGCCATCGCGATACCGGCGGTCTACACCGTCGACGCACTTCGGC TCGGGCCGCCGGGCGCACTGTTCTTCGTACTGGTATGTGGCGGTGCGCTCGGGGCTACCGAGTGGGGCGTGGCTCCGGTG CGGATTCTGGTCTGCGCCAGCCTCGGCGCGGGCGCGGCCGTACTTGTTTCGATGACCGGTGCCGTCATCGACCGTCAGAA ACCCGAGCGCGTCGCGACCCACCGCGCCGTCGAAGCCGTAGACGTCTATGCGCGGCCGGGCAACGCCACGGTCGACGCCA GGCATGCCGCGGGCGCCGCAATCTCTTCGGCATGGACGGCCCTGCACGACGCCGGACTCTCCTCCCGGTCCGATTCTCCG TTGGTCACCACGATGCTGGACACGCACCGCAGGTTCACCGAAATCTCCGTCGGCAACAAGATGGTGCTCGACCACCTCAT TCCCGGAGACCACGTTCTTGTCGTGCGGCCGAGTATTTGGTACCGGCTACGCCGGTCGGTACGGTTTCGTTCGCACGCGA CGATCACCGCCGGGCGGGCCGGTATCGCCTGCCTCGGAGCAGGAGTCCTCAGTGCGGCCGTCGGCCTGACGCGACCCCAA TGGGCCATTCTGAGCGCCCTGGTGATCGTCCACATGGGACCCGATCGGCTGCATGGAACCGTGCGCGGGCTGCACCGGTT CGCAGGGACCGTGGTCGGACTCGCACTCTTCGCGGTGTTGTATCAGCTGTCGCTCACCGGGTACGCACTGATCGCGGCCA TCGCGACCCTGCAGTTCTGCACCGAGCTGTTCCTGCCGCGCAACTACGCGGTCGCCGTGACCTTCGTGACTCCGATCGCA CTGCTGTCGGCAGGTGTGGTCACCCTGCACGGATCGGTCACGTCGATCGTGCGTGACAGGCTGGCCGAGACGCTGATCGG CGTGGCGGTGGCCATGGCCTCGATCTATCTGGTGGCACCGCATGCACATCGCCGCACCTTCGCATTTACCGAGGCCCGGA TCCGCAGGGCGGCCCTGGGGCTGGTGGCCGCAGCCCGGATTCAGGCCGCCCACGACGCGGCCTACGCGCACGCCCGAGAC CTCTCTTTCGAGCTCGAGGGAGCAATCCGGGCCGGAGTGGACAGCGCTCACGACGAACCGGAATGGACACAGGTGCACTG GCCCGCACACGCCGCACTCATTCATCACGGCTACGACCTGGTGGCCGCCTGCTGGGCCACACCGCCGGGACAGATGCTTG CCGACCCCGATCGCTGGGAACGTCGTTTCCGCGGCGAGGCCTGA
Upstream 100 bases:
>100_bases AGGGCAATTGAGCAGCCACGCCAAGGGCCGTCCACAGCGCTACTGCTCCCCCGCCTGTAAACAGCGCGCCTACCGGCACA GACACGGTATGAAATGACGT
Downstream 100 bases:
>100_bases TGCGGCGGTCGGCCATCTCGACGCATATGCGTCAAGATCCCGTCAAGTTCTCATAGTCCCGCAATAATGTGACGAGGGTC ACATCACGTGGATACCCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 547; Mature: 546
Protein sequence:
>547_residues MTPPAPESPDPLPQIARARSILFSAPPAGRRWSIGLRAAAAVAIPGTLVVAAGYPNAALYVTYGAFAVLYGEGRPYRVRA AVVATAGIALMLVTAVGVVVGSCAPGGVTNKAATILTLAAIAIPAVYTVDALRLGPPGALFFVLVCGGALGATEWGVAPV RILVCASLGAGAAVLVSMTGAVIDRQKPERVATHRAVEAVDVYARPGNATVDARHAAGAAISSAWTALHDAGLSSRSDSP LVTTMLDTHRRFTEISVGNKMVLDHLIPGDHVLVVRPSIWYRLRRSVRFRSHATITAGRAGIACLGAGVLSAAVGLTRPQ WAILSALVIVHMGPDRLHGTVRGLHRFAGTVVGLALFAVLYQLSLTGYALIAAIATLQFCTELFLPRNYAVAVTFVTPIA LLSAGVVTLHGSVTSIVRDRLAETLIGVAVAMASIYLVAPHAHRRTFAFTEARIRRAALGLVAAARIQAAHDAAYAHARD LSFELEGAIRAGVDSAHDEPEWTQVHWPAHAALIHHGYDLVAACWATPPGQMLADPDRWERRFRGEA
Sequences:
>Translated_547_residues MTPPAPESPDPLPQIARARSILFSAPPAGRRWSIGLRAAAAVAIPGTLVVAAGYPNAALYVTYGAFAVLYGEGRPYRVRA AVVATAGIALMLVTAVGVVVGSCAPGGVTNKAATILTLAAIAIPAVYTVDALRLGPPGALFFVLVCGGALGATEWGVAPV RILVCASLGAGAAVLVSMTGAVIDRQKPERVATHRAVEAVDVYARPGNATVDARHAAGAAISSAWTALHDAGLSSRSDSP LVTTMLDTHRRFTEISVGNKMVLDHLIPGDHVLVVRPSIWYRLRRSVRFRSHATITAGRAGIACLGAGVLSAAVGLTRPQ WAILSALVIVHMGPDRLHGTVRGLHRFAGTVVGLALFAVLYQLSLTGYALIAAIATLQFCTELFLPRNYAVAVTFVTPIA LLSAGVVTLHGSVTSIVRDRLAETLIGVAVAMASIYLVAPHAHRRTFAFTEARIRRAALGLVAAARIQAAHDAAYAHARD LSFELEGAIRAGVDSAHDEPEWTQVHWPAHAALIHHGYDLVAACWATPPGQMLADPDRWERRFRGEA >Mature_546_residues TPPAPESPDPLPQIARARSILFSAPPAGRRWSIGLRAAAAVAIPGTLVVAAGYPNAALYVTYGAFAVLYGEGRPYRVRAA VVATAGIALMLVTAVGVVVGSCAPGGVTNKAATILTLAAIAIPAVYTVDALRLGPPGALFFVLVCGGALGATEWGVAPVR ILVCASLGAGAAVLVSMTGAVIDRQKPERVATHRAVEAVDVYARPGNATVDARHAAGAAISSAWTALHDAGLSSRSDSPL VTTMLDTHRRFTEISVGNKMVLDHLIPGDHVLVVRPSIWYRLRRSVRFRSHATITAGRAGIACLGAGVLSAAVGLTRPQW AILSALVIVHMGPDRLHGTVRGLHRFAGTVVGLALFAVLYQLSLTGYALIAAIATLQFCTELFLPRNYAVAVTFVTPIAL LSAGVVTLHGSVTSIVRDRLAETLIGVAVAMASIYLVAPHAHRRTFAFTEARIRRAALGLVAAARIQAAHDAAYAHARDL SFELEGAIRAGVDSAHDEPEWTQVHWPAHAALIHHGYDLVAACWATPPGQMLADPDRWERRFRGEA
Specific function: Unknown
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57403; Mature: 57272
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPAPESPDPLPQIARARSILFSAPPAGRRWSIGLRAAAAVAIPGTLVVAAGYPNAALY CCCCCCCCCCCHHHHHHHHHHEEECCCCCCEEECCHHHHHEEECCCEEEEEECCCCCEEE VTYGAFAVLYGEGRPYRVRAAVVATAGIALMLVTAVGVVVGSCAPGGVTNKAATILTLAA EEEEEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH IAIPAVYTVDALRLGPPGALFFVLVCGGALGATEWGVAPVRILVCASLGAGAAVLVSMTG HHHHHHHHHHHEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHH AVIDRQKPERVATHRAVEAVDVYARPGNATVDARHAAGAAISSAWTALHDAGLSSRSDSP HHHCCCCCHHHHHHHHHHHHEEEECCCCCCEECHHHCCHHHHHHHHHHHHCCCCCCCCCC LVTTMLDTHRRFTEISVGNKMVLDHLIPGDHVLVVRPSIWYRLRRSVRFRSHATITAGRA EEHHHHHHHHHHHEECCCCHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCEEECCCC GIACLGAGVLSAAVGLTRPQWAILSALVIVHMGPDRLHGTVRGLHRFAGTVVGLALFAVL CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YQLSLTGYALIAAIATLQFCTELFLPRNYAVAVTFVTPIALLSAGVVTLHGSVTSIVRDR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCEEECCHHHHHHHHH LAETLIGVAVAMASIYLVAPHAHRRTFAFTEARIRRAALGLVAAARIQAAHDAAYAHARD HHHHHHHHHHHHHHHEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LSFELEGAIRAGVDSAHDEPEWTQVHWPAHAALIHHGYDLVAACWATPPGQMLADPDRWE CCEEECCHHHCCCCCCCCCCCCEEEECCHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHH RRFRGEA HHHCCCC >Mature Secondary Structure TPPAPESPDPLPQIARARSILFSAPPAGRRWSIGLRAAAAVAIPGTLVVAAGYPNAALY CCCCCCCCCCHHHHHHHHHHEEECCCCCCEEECCHHHHHEEECCCEEEEEECCCCCEEE VTYGAFAVLYGEGRPYRVRAAVVATAGIALMLVTAVGVVVGSCAPGGVTNKAATILTLAA EEEEEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH IAIPAVYTVDALRLGPPGALFFVLVCGGALGATEWGVAPVRILVCASLGAGAAVLVSMTG HHHHHHHHHHHEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHH AVIDRQKPERVATHRAVEAVDVYARPGNATVDARHAAGAAISSAWTALHDAGLSSRSDSP HHHCCCCCHHHHHHHHHHHHEEEECCCCCCEECHHHCCHHHHHHHHHHHHCCCCCCCCCC LVTTMLDTHRRFTEISVGNKMVLDHLIPGDHVLVVRPSIWYRLRRSVRFRSHATITAGRA EEHHHHHHHHHHHEECCCCHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCEEECCCC GIACLGAGVLSAAVGLTRPQWAILSALVIVHMGPDRLHGTVRGLHRFAGTVVGLALFAVL CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YQLSLTGYALIAAIATLQFCTELFLPRNYAVAVTFVTPIALLSAGVVTLHGSVTSIVRDR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCEEECCHHHHHHHHH LAETLIGVAVAMASIYLVAPHAHRRTFAFTEARIRRAALGLVAAARIQAAHDAAYAHARD HHHHHHHHHHHHHHHEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LSFELEGAIRAGVDSAHDEPEWTQVHWPAHAALIHHGYDLVAACWATPPGQMLADPDRWE CCEEECCHHHCCCCCCCCCCCCEEEECCHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHH RRFRGEA HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA