Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

Click here to switch to the map view.

The map label for this gene is 169629354

Identifier: 169629354

GI number: 169629354

Start: 2314707

End: 2316350

Strand: Reverse

Name: 169629354

Synonym: MAB_2268c

Alternate gene names: NA

Gene position: 2316350-2314707 (Counterclockwise)

Preceding gene: 169629355

Following gene: 169629353

Centisome position: 45.71

GC content: 68.55

Gene sequence:

>1644_bases
GTGACCCCGCCCGCGCCTGAATCACCGGACCCGCTTCCGCAGATCGCCCGGGCTCGCTCCATCCTGTTCTCCGCGCCACC
CGCGGGACGGCGCTGGAGCATCGGGCTACGCGCTGCGGCCGCCGTCGCCATACCCGGGACGCTGGTGGTTGCTGCCGGCT
ACCCGAATGCCGCGCTCTACGTCACCTATGGGGCGTTCGCGGTCCTGTACGGCGAGGGCCGCCCCTACCGGGTGCGCGCC
GCCGTGGTGGCGACCGCCGGTATCGCCCTGATGCTCGTCACCGCAGTCGGCGTGGTCGTGGGTAGCTGCGCACCAGGTGG
TGTGACCAACAAGGCTGCGACCATTCTGACCCTGGCGGCCATCGCGATACCGGCGGTCTACACCGTCGACGCACTTCGGC
TCGGGCCGCCGGGCGCACTGTTCTTCGTACTGGTATGTGGCGGTGCGCTCGGGGCTACCGAGTGGGGCGTGGCTCCGGTG
CGGATTCTGGTCTGCGCCAGCCTCGGCGCGGGCGCGGCCGTACTTGTTTCGATGACCGGTGCCGTCATCGACCGTCAGAA
ACCCGAGCGCGTCGCGACCCACCGCGCCGTCGAAGCCGTAGACGTCTATGCGCGGCCGGGCAACGCCACGGTCGACGCCA
GGCATGCCGCGGGCGCCGCAATCTCTTCGGCATGGACGGCCCTGCACGACGCCGGACTCTCCTCCCGGTCCGATTCTCCG
TTGGTCACCACGATGCTGGACACGCACCGCAGGTTCACCGAAATCTCCGTCGGCAACAAGATGGTGCTCGACCACCTCAT
TCCCGGAGACCACGTTCTTGTCGTGCGGCCGAGTATTTGGTACCGGCTACGCCGGTCGGTACGGTTTCGTTCGCACGCGA
CGATCACCGCCGGGCGGGCCGGTATCGCCTGCCTCGGAGCAGGAGTCCTCAGTGCGGCCGTCGGCCTGACGCGACCCCAA
TGGGCCATTCTGAGCGCCCTGGTGATCGTCCACATGGGACCCGATCGGCTGCATGGAACCGTGCGCGGGCTGCACCGGTT
CGCAGGGACCGTGGTCGGACTCGCACTCTTCGCGGTGTTGTATCAGCTGTCGCTCACCGGGTACGCACTGATCGCGGCCA
TCGCGACCCTGCAGTTCTGCACCGAGCTGTTCCTGCCGCGCAACTACGCGGTCGCCGTGACCTTCGTGACTCCGATCGCA
CTGCTGTCGGCAGGTGTGGTCACCCTGCACGGATCGGTCACGTCGATCGTGCGTGACAGGCTGGCCGAGACGCTGATCGG
CGTGGCGGTGGCCATGGCCTCGATCTATCTGGTGGCACCGCATGCACATCGCCGCACCTTCGCATTTACCGAGGCCCGGA
TCCGCAGGGCGGCCCTGGGGCTGGTGGCCGCAGCCCGGATTCAGGCCGCCCACGACGCGGCCTACGCGCACGCCCGAGAC
CTCTCTTTCGAGCTCGAGGGAGCAATCCGGGCCGGAGTGGACAGCGCTCACGACGAACCGGAATGGACACAGGTGCACTG
GCCCGCACACGCCGCACTCATTCATCACGGCTACGACCTGGTGGCCGCCTGCTGGGCCACACCGCCGGGACAGATGCTTG
CCGACCCCGATCGCTGGGAACGTCGTTTCCGCGGCGAGGCCTGA

Upstream 100 bases:

>100_bases
AGGGCAATTGAGCAGCCACGCCAAGGGCCGTCCACAGCGCTACTGCTCCCCCGCCTGTAAACAGCGCGCCTACCGGCACA
GACACGGTATGAAATGACGT

Downstream 100 bases:

>100_bases
TGCGGCGGTCGGCCATCTCGACGCATATGCGTCAAGATCCCGTCAAGTTCTCATAGTCCCGCAATAATGTGACGAGGGTC
ACATCACGTGGATACCCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 547; Mature: 546

Protein sequence:

>547_residues
MTPPAPESPDPLPQIARARSILFSAPPAGRRWSIGLRAAAAVAIPGTLVVAAGYPNAALYVTYGAFAVLYGEGRPYRVRA
AVVATAGIALMLVTAVGVVVGSCAPGGVTNKAATILTLAAIAIPAVYTVDALRLGPPGALFFVLVCGGALGATEWGVAPV
RILVCASLGAGAAVLVSMTGAVIDRQKPERVATHRAVEAVDVYARPGNATVDARHAAGAAISSAWTALHDAGLSSRSDSP
LVTTMLDTHRRFTEISVGNKMVLDHLIPGDHVLVVRPSIWYRLRRSVRFRSHATITAGRAGIACLGAGVLSAAVGLTRPQ
WAILSALVIVHMGPDRLHGTVRGLHRFAGTVVGLALFAVLYQLSLTGYALIAAIATLQFCTELFLPRNYAVAVTFVTPIA
LLSAGVVTLHGSVTSIVRDRLAETLIGVAVAMASIYLVAPHAHRRTFAFTEARIRRAALGLVAAARIQAAHDAAYAHARD
LSFELEGAIRAGVDSAHDEPEWTQVHWPAHAALIHHGYDLVAACWATPPGQMLADPDRWERRFRGEA

Sequences:

>Translated_547_residues
MTPPAPESPDPLPQIARARSILFSAPPAGRRWSIGLRAAAAVAIPGTLVVAAGYPNAALYVTYGAFAVLYGEGRPYRVRA
AVVATAGIALMLVTAVGVVVGSCAPGGVTNKAATILTLAAIAIPAVYTVDALRLGPPGALFFVLVCGGALGATEWGVAPV
RILVCASLGAGAAVLVSMTGAVIDRQKPERVATHRAVEAVDVYARPGNATVDARHAAGAAISSAWTALHDAGLSSRSDSP
LVTTMLDTHRRFTEISVGNKMVLDHLIPGDHVLVVRPSIWYRLRRSVRFRSHATITAGRAGIACLGAGVLSAAVGLTRPQ
WAILSALVIVHMGPDRLHGTVRGLHRFAGTVVGLALFAVLYQLSLTGYALIAAIATLQFCTELFLPRNYAVAVTFVTPIA
LLSAGVVTLHGSVTSIVRDRLAETLIGVAVAMASIYLVAPHAHRRTFAFTEARIRRAALGLVAAARIQAAHDAAYAHARD
LSFELEGAIRAGVDSAHDEPEWTQVHWPAHAALIHHGYDLVAACWATPPGQMLADPDRWERRFRGEA
>Mature_546_residues
TPPAPESPDPLPQIARARSILFSAPPAGRRWSIGLRAAAAVAIPGTLVVAAGYPNAALYVTYGAFAVLYGEGRPYRVRAA
VVATAGIALMLVTAVGVVVGSCAPGGVTNKAATILTLAAIAIPAVYTVDALRLGPPGALFFVLVCGGALGATEWGVAPVR
ILVCASLGAGAAVLVSMTGAVIDRQKPERVATHRAVEAVDVYARPGNATVDARHAAGAAISSAWTALHDAGLSSRSDSPL
VTTMLDTHRRFTEISVGNKMVLDHLIPGDHVLVVRPSIWYRLRRSVRFRSHATITAGRAGIACLGAGVLSAAVGLTRPQW
AILSALVIVHMGPDRLHGTVRGLHRFAGTVVGLALFAVLYQLSLTGYALIAAIATLQFCTELFLPRNYAVAVTFVTPIAL
LSAGVVTLHGSVTSIVRDRLAETLIGVAVAMASIYLVAPHAHRRTFAFTEARIRRAALGLVAAARIQAAHDAAYAHARDL
SFELEGAIRAGVDSAHDEPEWTQVHWPAHAALIHHGYDLVAACWATPPGQMLADPDRWERRFRGEA

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57403; Mature: 57272

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPPAPESPDPLPQIARARSILFSAPPAGRRWSIGLRAAAAVAIPGTLVVAAGYPNAALY
CCCCCCCCCCCHHHHHHHHHHEEECCCCCCEEECCHHHHHEEECCCEEEEEECCCCCEEE
VTYGAFAVLYGEGRPYRVRAAVVATAGIALMLVTAVGVVVGSCAPGGVTNKAATILTLAA
EEEEEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
IAIPAVYTVDALRLGPPGALFFVLVCGGALGATEWGVAPVRILVCASLGAGAAVLVSMTG
HHHHHHHHHHHEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHH
AVIDRQKPERVATHRAVEAVDVYARPGNATVDARHAAGAAISSAWTALHDAGLSSRSDSP
HHHCCCCCHHHHHHHHHHHHEEEECCCCCCEECHHHCCHHHHHHHHHHHHCCCCCCCCCC
LVTTMLDTHRRFTEISVGNKMVLDHLIPGDHVLVVRPSIWYRLRRSVRFRSHATITAGRA
EEHHHHHHHHHHHEECCCCHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCEEECCCC
GIACLGAGVLSAAVGLTRPQWAILSALVIVHMGPDRLHGTVRGLHRFAGTVVGLALFAVL
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQLSLTGYALIAAIATLQFCTELFLPRNYAVAVTFVTPIALLSAGVVTLHGSVTSIVRDR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCEEECCHHHHHHHHH
LAETLIGVAVAMASIYLVAPHAHRRTFAFTEARIRRAALGLVAAARIQAAHDAAYAHARD
HHHHHHHHHHHHHHHEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LSFELEGAIRAGVDSAHDEPEWTQVHWPAHAALIHHGYDLVAACWATPPGQMLADPDRWE
CCEEECCHHHCCCCCCCCCCCCEEEECCHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHH
RRFRGEA
HHHCCCC
>Mature Secondary Structure 
TPPAPESPDPLPQIARARSILFSAPPAGRRWSIGLRAAAAVAIPGTLVVAAGYPNAALY
CCCCCCCCCCHHHHHHHHHHEEECCCCCCEEECCHHHHHEEECCCEEEEEECCCCCEEE
VTYGAFAVLYGEGRPYRVRAAVVATAGIALMLVTAVGVVVGSCAPGGVTNKAATILTLAA
EEEEEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
IAIPAVYTVDALRLGPPGALFFVLVCGGALGATEWGVAPVRILVCASLGAGAAVLVSMTG
HHHHHHHHHHHEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHH
AVIDRQKPERVATHRAVEAVDVYARPGNATVDARHAAGAAISSAWTALHDAGLSSRSDSP
HHHCCCCCHHHHHHHHHHHHEEEECCCCCCEECHHHCCHHHHHHHHHHHHCCCCCCCCCC
LVTTMLDTHRRFTEISVGNKMVLDHLIPGDHVLVVRPSIWYRLRRSVRFRSHATITAGRA
EEHHHHHHHHHHHEECCCCHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCEEECCCC
GIACLGAGVLSAAVGLTRPQWAILSALVIVHMGPDRLHGTVRGLHRFAGTVVGLALFAVL
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQLSLTGYALIAAIATLQFCTELFLPRNYAVAVTFVTPIALLSAGVVTLHGSVTSIVRDR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCEEECCHHHHHHHHH
LAETLIGVAVAMASIYLVAPHAHRRTFAFTEARIRRAALGLVAAARIQAAHDAAYAHARD
HHHHHHHHHHHHHHHEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LSFELEGAIRAGVDSAHDEPEWTQVHWPAHAALIHHGYDLVAACWATPPGQMLADPDRWE
CCEEECCHHHCCCCCCCCCCCCEEEECCHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHH
RRFRGEA
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA