| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629320
Identifier: 169629320
GI number: 169629320
Start: 2259435
End: 2261297
Strand: Reverse
Name: 169629320
Synonym: MAB_2234c
Alternate gene names: NA
Gene position: 2261297-2259435 (Counterclockwise)
Preceding gene: 169629322
Following gene: 169629319
Centisome position: 44.63
GC content: 64.68
Gene sequence:
>1863_bases GTGGATATTCGTGAACGAGTTGGTCAGCGCGGTTGGGCGGCCCAGGATGTGGCCTCGGCGACGCGCATCGACCCCGAATT GGAGAGCCGATTCGCGACGTGCTGTCGGGCGCTAGGCCTCTCCGTCAACGACAGGCGGCGTCCCGCCGATTTGCCGGCAG CGCGCTATGGCTTCACGTCGCTGTGCCGTACCGCTCAAGACCAGTGTGATGTGTGGGTCGGCCTCGCGGCCGCCGGCGGT GCCACCGTCGACGTCCTGGAAGCCATCTCAGAGACCACCGCCACCGCGGGTCACCTCCAGCATGCGGTCAACCTGCATCC CGGCGACCTCACCTTCACCTACGACACCGGGCTGTACCTCGAGTTTCGCGCCGGCGGCCCCGACGACTATCACCTGGCCT ACGCGGCGGCACTCGTGGACAAGGGTGAGTACGACAAGGCCAACGAGCTGATCGCCGCCGTGACCGCGCGGCGCCCGGGG TGGTTCAACGCCCGGTGGGTCGCCGTCGCCATGCAGAACCGGGCCCAGCGGTGGGCCGATGTGGTCTCGCTGCTGACTCC CGTGGTCACCGATGAGTCGCTGGACCCCACGACATCCCATGCCGTGCGGATCACCCTGGGCATCGCGCTCGCCAAGCTCG GCATGGTCAATCCTGCACTGTCCTACCTCGAAGACCCCAGTGGCCCAATCGAAGTGGCGGCGACCGATGGTGCTCTCGCC AAGGCTCTGAATCTGCGCCACCACGGTGACGAGGAGACCGCTACCGAGGTGCTTCAGGATCTGTATGCCGCCAATCCGGA GAACGCCGAGATCGAGCATGCGCTCACCGATCCGAGCGTAGGACTGCACACCACGACCTCCGCCCGCATCGCCGCTCGCA CCGACCCCTGGGACCCCGAAACCGAACCCAGCGAAGAGGACTTCATCGATCCCGAGGCCCATGAGCGCAAGGCGATCCTG CTGGCCGAGGCCGAGCAGCAGCTCAGCGAGTTCATCGGTCTGGAACAGGTCAAGGACCAGGTCGCCCGACTCAAGAGTTC GGTGGCAATGGCGTTGCGCCGTCAGGACCGCGGGCTCGCCGTCGGTCACCGCACGCATCACTTGGTGTTCGCGGGTCCTC CCGGCACCGGTAAGACCACCATCGCCCGCGTGGTCGCCAAGATCTATTGTGGCCTGGGCCTTCTCAAGCGCGAGAATGTC CGCGAAGTACACCGTGCCGATCTCATCGGGCAGCACATCGGTGAGACCGAGGCCAAGACCAACGCCGTCATCGACAGTGC TCTGGATGGCGTCCTGTTCCTCGATGAGGCGTACGCCCTGGTATCGACCGGCGCCAAGAACGACTTCGGTTTGGTGGCCA TCGACACCCTGCTGGCCCGGATGGAAAACGATCGCGACCGTTTGGTCGTGATCGTCGCCGGGTACCGCGCAGAGCTGGAT CAGTTCCTGGATACCAACGAAGGTCTGCGCTCTCGTTTCACGAGATCAATCAACTTCCCTTCATACGCACCGTCCGAACT CGTCGAGATCGCCGCGGCGATGGCGTCTGTTCGGGACAGCAAGTTCGACGAGGGCGCGGAGGCCGAGCTGCTCACCGCCT TCTCCGCGATGTGCGCCGCGGAGGCTCCGGATACCCGCGGTATCGCACGCCGCAGCATCGATGTGGCCGGTAACGGCCGT TTCGTTCGTAACGTTGTTGAACGCTCCGAGGAGGAACGTGAACACCGCCTTGATAATTCAGGCGCAGAAGAGTTCAGCGA TGACGACCTTATGACGGTCACCGTCGAAGATGTGCGGGCCTCTGTCGAGGCCATCGTCGCCGGCCTTGGACTTTCGGCCT CGGGGGCGTCGGTCAAGAAATGA
Upstream 100 bases:
>100_bases AAATTTGCTGACAGCTCAAGCGAGCTACGTCAGGAACCAATCACGTTCGCGAGCCGACTACTCCAATCAGCGAGCGTGTC GATCGGGTGAAGGGCTGTAA
Downstream 100 bases:
>100_bases GCGACAATCGAGACAACAACGCGAACTCCGAGCGCCGGGCCTTCGCGTCACGCACTCCGGCCAGCGAGAACCCCGAACCG CTGAAGTACCGCCGCGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 620; Mature: 620
Protein sequence:
>620_residues MDIRERVGQRGWAAQDVASATRIDPELESRFATCCRALGLSVNDRRRPADLPAARYGFTSLCRTAQDQCDVWVGLAAAGG ATVDVLEAISETTATAGHLQHAVNLHPGDLTFTYDTGLYLEFRAGGPDDYHLAYAAALVDKGEYDKANELIAAVTARRPG WFNARWVAVAMQNRAQRWADVVSLLTPVVTDESLDPTTSHAVRITLGIALAKLGMVNPALSYLEDPSGPIEVAATDGALA KALNLRHHGDEETATEVLQDLYAANPENAEIEHALTDPSVGLHTTTSARIAARTDPWDPETEPSEEDFIDPEAHERKAIL LAEAEQQLSEFIGLEQVKDQVARLKSSVAMALRRQDRGLAVGHRTHHLVFAGPPGTGKTTIARVVAKIYCGLGLLKRENV REVHRADLIGQHIGETEAKTNAVIDSALDGVLFLDEAYALVSTGAKNDFGLVAIDTLLARMENDRDRLVVIVAGYRAELD QFLDTNEGLRSRFTRSINFPSYAPSELVEIAAAMASVRDSKFDEGAEAELLTAFSAMCAAEAPDTRGIARRSIDVAGNGR FVRNVVERSEEEREHRLDNSGAEEFSDDDLMTVTVEDVRASVEAIVAGLGLSASGASVKK
Sequences:
>Translated_620_residues MDIRERVGQRGWAAQDVASATRIDPELESRFATCCRALGLSVNDRRRPADLPAARYGFTSLCRTAQDQCDVWVGLAAAGG ATVDVLEAISETTATAGHLQHAVNLHPGDLTFTYDTGLYLEFRAGGPDDYHLAYAAALVDKGEYDKANELIAAVTARRPG WFNARWVAVAMQNRAQRWADVVSLLTPVVTDESLDPTTSHAVRITLGIALAKLGMVNPALSYLEDPSGPIEVAATDGALA KALNLRHHGDEETATEVLQDLYAANPENAEIEHALTDPSVGLHTTTSARIAARTDPWDPETEPSEEDFIDPEAHERKAIL LAEAEQQLSEFIGLEQVKDQVARLKSSVAMALRRQDRGLAVGHRTHHLVFAGPPGTGKTTIARVVAKIYCGLGLLKRENV REVHRADLIGQHIGETEAKTNAVIDSALDGVLFLDEAYALVSTGAKNDFGLVAIDTLLARMENDRDRLVVIVAGYRAELD QFLDTNEGLRSRFTRSINFPSYAPSELVEIAAAMASVRDSKFDEGAEAELLTAFSAMCAAEAPDTRGIARRSIDVAGNGR FVRNVVERSEEEREHRLDNSGAEEFSDDDLMTVTVEDVRASVEAIVAGLGLSASGASVKK >Mature_620_residues MDIRERVGQRGWAAQDVASATRIDPELESRFATCCRALGLSVNDRRRPADLPAARYGFTSLCRTAQDQCDVWVGLAAAGG ATVDVLEAISETTATAGHLQHAVNLHPGDLTFTYDTGLYLEFRAGGPDDYHLAYAAALVDKGEYDKANELIAAVTARRPG WFNARWVAVAMQNRAQRWADVVSLLTPVVTDESLDPTTSHAVRITLGIALAKLGMVNPALSYLEDPSGPIEVAATDGALA KALNLRHHGDEETATEVLQDLYAANPENAEIEHALTDPSVGLHTTTSARIAARTDPWDPETEPSEEDFIDPEAHERKAIL LAEAEQQLSEFIGLEQVKDQVARLKSSVAMALRRQDRGLAVGHRTHHLVFAGPPGTGKTTIARVVAKIYCGLGLLKRENV REVHRADLIGQHIGETEAKTNAVIDSALDGVLFLDEAYALVSTGAKNDFGLVAIDTLLARMENDRDRLVVIVAGYRAELD QFLDTNEGLRSRFTRSINFPSYAPSELVEIAAAMASVRDSKFDEGAEAELLTAFSAMCAAEAPDTRGIARRSIDVAGNGR FVRNVVERSEEEREHRLDNSGAEEFSDDDLMTVTVEDVRASVEAIVAGLGLSASGASVKK
Specific function: Unknown
COG id: COG0464
COG function: function code O; ATPases of the AAA+ class
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR000641 [H]
Pfam domain/function: PF00004 AAA [H]
EC number: NA
Molecular weight: Translated: 67058; Mature: 67058
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIRERVGQRGWAAQDVASATRIDPELESRFATCCRALGLSVNDRRRPADLPAARYGFTS CCHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH LCRTAQDQCDVWVGLAAAGGATVDVLEAISETTATAGHLQHAVNLHPGDLTFTYDTGLYL HHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEE EFRAGGPDDYHLAYAAALVDKGEYDKANELIAAVTARRPGWFNARWVAVAMQNRAQRWAD EEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHH VVSLLTPVVTDESLDPTTSHAVRITLGIALAKLGMVNPALSYLEDPSGPIEVAATDGALA HHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHCCCCCCEEEEECCHHHH KALNLRHHGDEETATEVLQDLYAANPENAEIEHALTDPSVGLHTTTSARIAARTDPWDPE HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEECCCCEEEECCCCCCCC TEPSEEDFIDPEAHERKAILLAEAEQQLSEFIGLEQVKDQVARLKSSVAMALRRQDRGLA CCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCE VGHRTHHLVFAGPPGTGKTTIARVVAKIYCGLGLLKRENVREVHRADLIGQHIGETEAKT ECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH NAVIDSALDGVLFLDEAYALVSTGAKNDFGLVAIDTLLARMENDRDRLVVIVAGYRAELD HHHHHHHHCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCHHHHH QFLDTNEGLRSRFTRSINFPSYAPSELVEIAAAMASVRDSKFDEGAEAELLTAFSAMCAA HHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC EAPDTRGIARRSIDVAGNGRFVRNVVERSEEEREHRLDNSGAEEFSDDDLMTVTVEDVRA CCCCCCCHHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHH SVEAIVAGLGLSASGASVKK HHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MDIRERVGQRGWAAQDVASATRIDPELESRFATCCRALGLSVNDRRRPADLPAARYGFTS CCHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH LCRTAQDQCDVWVGLAAAGGATVDVLEAISETTATAGHLQHAVNLHPGDLTFTYDTGLYL HHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEE EFRAGGPDDYHLAYAAALVDKGEYDKANELIAAVTARRPGWFNARWVAVAMQNRAQRWAD EEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHH VVSLLTPVVTDESLDPTTSHAVRITLGIALAKLGMVNPALSYLEDPSGPIEVAATDGALA HHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHCCCCCCEEEEECCHHHH KALNLRHHGDEETATEVLQDLYAANPENAEIEHALTDPSVGLHTTTSARIAARTDPWDPE HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEECCCCEEEECCCCCCCC TEPSEEDFIDPEAHERKAILLAEAEQQLSEFIGLEQVKDQVARLKSSVAMALRRQDRGLA CCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCE VGHRTHHLVFAGPPGTGKTTIARVVAKIYCGLGLLKRENVREVHRADLIGQHIGETEAKT ECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH NAVIDSALDGVLFLDEAYALVSTGAKNDFGLVAIDTLLARMENDRDRLVVIVAGYRAELD HHHHHHHHCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCHHHHH QFLDTNEGLRSRFTRSINFPSYAPSELVEIAAAMASVRDSKFDEGAEAELLTAFSAMCAA HHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC EAPDTRGIARRSIDVAGNGRFVRNVVERSEEEREHRLDNSGAEEFSDDDLMTVTVEDVRA CCCCCCCHHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHH SVEAIVAGLGLSASGASVKK HHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]