Click here to switch to the map view.

The map label for this gene is crtK [H]

Identifier: 169629309

GI number: 169629309

Start: 2246055

End: 2246555

Strand: Direct

Name: crtK [H]

Synonym: MAB_2223

Alternate gene names: 169629309

Gene position: 2246055-2246555 (Clockwise)

Preceding gene: 169629307

Following gene: 169629321

Centisome position: 44.33

GC content: 66.87

Gene sequence:

>501_bases
ATGACGGATCGAGTATCGCCACGACTCCCTAATGACATCCCCGCGCTGGGCATCTCTTTGGCGGCCGCCGCGGTAGCGGC
GGGGGTGGGAGGGTTAGCGTCCGCGAACGCGGCGGCACAGTACGGCGTGCTCGCGCAGCCGTCCTGGGCGCCGCCCGCCT
GGGTGTTCGGCCCGGTGTGGACGGTGCTGTACGTGCTGATGGGTGTCGCGGCCTGGTTGGTGTGGCGCACGCGTCCGCCG
GTACCCGCCAGTGCGCTGACCGCCTACGGGATACAGCTGGTGCTGAACGCGCTGTGGACACCGCTGTTCTTTGGTCTCGG
TTGGCGTGGTGCCGCGCTGGCGGAGATCGCCGTTCTGTGGATCGCCTTGCTGGTGACGATCGCGCTGTTCTGGGTTCGTA
GTCGAGCCGCGGCTGTGCTGTTGTTGCCCTATCTGGTGTGGACTACGTTCGCCGCGTGCTTGAACTTCGCGGTCTGGCAA
CTCAATACCGCGGCCGTCTGA

Upstream 100 bases:

>100_bases
ACCAGGCTCAGCGTGATGGCGAATATTCCCAAACGTCTGGCCGATGCTGCGCACACCCAGAAAGGGTACCGAGGGCGGAG
TTACCCGATAGATTCCCGGG

Downstream 100 bases:

>100_bases
GCGGCGCTGGCCATCAGACCAGCGCCGGCTCCTGGTCCCGCTGAGTGAGGCCGTCAAGAAATTCCGCGGTGACGGCGGCG
CCCGCCCCAGCCAGGGTCTT

Product: putative TspO/MBR-related protein precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MTDRVSPRLPNDIPALGISLAAAAVAAGVGGLASANAAAQYGVLAQPSWAPPAWVFGPVWTVLYVLMGVAAWLVWRTRPP
VPASALTAYGIQLVLNALWTPLFFGLGWRGAALAEIAVLWIALLVTIALFWVRSRAAAVLLLPYLVWTTFAACLNFAVWQ
LNTAAV

Sequences:

>Translated_166_residues
MTDRVSPRLPNDIPALGISLAAAAVAAGVGGLASANAAAQYGVLAQPSWAPPAWVFGPVWTVLYVLMGVAAWLVWRTRPP
VPASALTAYGIQLVLNALWTPLFFGLGWRGAALAEIAVLWIALLVTIALFWVRSRAAAVLLLPYLVWTTFAACLNFAVWQ
LNTAAV
>Mature_165_residues
TDRVSPRLPNDIPALGISLAAAAVAAGVGGLASANAAAQYGVLAQPSWAPPAWVFGPVWTVLYVLMGVAAWLVWRTRPPV
PASALTAYGIQLVLNALWTPLFFGLGWRGAALAEIAVLWIALLVTIALFWVRSRAAAVLLLPYLVWTTFAACLNFAVWQL
NTAAV

Specific function: Unknown

COG id: COG3476

COG function: function code T; Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TspO/BZRP family [H]

Homologues:

Organism=Homo sapiens, GI74275350, Length=158, Percent_Identity=36.0759493670886, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI19920472, Length=162, Percent_Identity=37.037037037037, Blast_Score=94, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004307 [H]

Pfam domain/function: PF03073 TspO_MBR [H]

EC number: NA

Molecular weight: Translated: 17608; Mature: 17477

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDRVSPRLPNDIPALGISLAAAAVAAGVGGLASANAAAQYGVLAQPSWAPPAWVFGPVW
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCHHHHCCCCCCCCCCCCCHHHHHHH
TVLYVLMGVAAWLVWRTRPPVPASALTAYGIQLVLNALWTPLFFGLGWRGAALAEIAVLW
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IALLVTIALFWVRSRAAAVLLLPYLVWTTFAACLNFAVWQLNTAAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDRVSPRLPNDIPALGISLAAAAVAAGVGGLASANAAAQYGVLAQPSWAPPAWVFGPVW
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCHHHHCCCCCCCCCCCCCHHHHHHH
TVLYVLMGVAAWLVWRTRPPVPASALTAYGIQLVLNALWTPLFFGLGWRGAALAEIAVLW
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IALLVTIALFWVRSRAAAVLLLPYLVWTTFAACLNFAVWQLNTAAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2747617 [H]