Click here to switch to the map view.

The map label for this gene is ssuA [H]

Identifier: 169629304

GI number: 169629304

Start: 2240530

End: 2241591

Strand: Direct

Name: ssuA [H]

Synonym: MAB_2218

Alternate gene names: 169629304

Gene position: 2240530-2241591 (Clockwise)

Preceding gene: 169629303

Following gene: 169629305

Centisome position: 44.22

GC content: 63.09

Gene sequence:

>1062_bases
ATGACGCCGAAACCGAGAACCACCGAGGAGAGCTCCTTGCACAGTTGGGTGTTTAAGTCGATCGTCAGCGCGACCGCGGT
GGTGCTGTCGTTGACGGCCTGCACCACCGGACGTGACGACAAGGGTGATGCCGCCGCGCCGGCGCTTGTTCCGCTGTCGG
GGCTCTCGAATCTCACGCTGCGCGTGGGTGATCAGAAGGGCGGCACCGAGTCACTGTTGCGGGCGGCGGGGGAGCTGGAC
AATGTGCCCTACAAGATCGAATTCTCGACCTTTACTTTCGGTCCTCCACAGATCGAGGCGCTGACCGCGGGCAAGATCGA
CTTCGCCGTCACCGGGAACACGCCGCCGATCTTCGGTGCAGCCTCGAAGGCCAGGATCAAGGTGGTATCCGGGTACACAA
ACGATGCTTCCGGTGATCAGATCCTGGTTGCCGATGCCTCGCCTATCCGATCGGTGGCCGACCTGCGCGGCAAGAAGGTG
GCCGTCGGTAAGGGCAGTTCGGCGCACGGCCATCTGCTGCTTCAGCTGCAGAAGGCGAATCTGACCATCAAGGACATCCA
GCCGGTCTTCTTGCAGCCAGCCGATGCGTTCACCGCGCTGAGCCAAGGTCAGGCGGACGCCTGGGCCATCTGGGACCCGT
ACACGGCGCTGGCCCAGAAGCAGTTGAAGGTTCGCACTCTCGTCACCGCGACCGGCGTCTCGAACGGATACGGATTCGGG
GTCGCCTCGCAGGTTGCCCTACGTGATGCTCAGCGCAACACCGCGTTGTCGGATGTGGTGCAGCGCATTGCGCGGGCCAG
CGCATGGGCCAGGGCTCATCCTCAGGAGTGGTACGGAAAGTACGCCGCCGCGATAGGAATCGATCCGGCGGCGGGAGAGC
TTGCGCAGTCGCGCAGCTTGCGGTTGCCGATACCGCTCAACGCGGAGGTGAGCGCCTCGGAGCAGCAGCTGGCGGACCTC
TTCGCGCAGTCGGGTCAGATTCAGGGCAAGCCCACCTTTTCCGATTTTATCGACAGCCGGTTCGACAACGTGCTCAAGCA
GTTCTTCACCCCTTCCCAATAA

Upstream 100 bases:

>100_bases
GACGAGGCGATATCGCTTGCCGACACCGTGCTGGTGCTCGACGAGGGCCGGCTGGCGCACACCCTGCGCATCCGCAATCC
GCGTAAACCCCGGGGGAAGC

Downstream 100 bases:

>100_bases
CCCGCATTTTTCCTCACAAGGAAGGCAATTCCCTTGGCCGCGAAGTTTTTCTGGTTTCTCCCCACCAACGGTGACAGCCG
TTCGATTGTGGGCGCCTCAC

Product: sulfonate ABC transporter periplasmic sulfonate-binding protein SsuA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MTPKPRTTEESSLHSWVFKSIVSATAVVLSLTACTTGRDDKGDAAAPALVPLSGLSNLTLRVGDQKGGTESLLRAAGELD
NVPYKIEFSTFTFGPPQIEALTAGKIDFAVTGNTPPIFGAASKARIKVVSGYTNDASGDQILVADASPIRSVADLRGKKV
AVGKGSSAHGHLLLQLQKANLTIKDIQPVFLQPADAFTALSQGQADAWAIWDPYTALAQKQLKVRTLVTATGVSNGYGFG
VASQVALRDAQRNTALSDVVQRIARASAWARAHPQEWYGKYAAAIGIDPAAGELAQSRSLRLPIPLNAEVSASEQQLADL
FAQSGQIQGKPTFSDFIDSRFDNVLKQFFTPSQ

Sequences:

>Translated_353_residues
MTPKPRTTEESSLHSWVFKSIVSATAVVLSLTACTTGRDDKGDAAAPALVPLSGLSNLTLRVGDQKGGTESLLRAAGELD
NVPYKIEFSTFTFGPPQIEALTAGKIDFAVTGNTPPIFGAASKARIKVVSGYTNDASGDQILVADASPIRSVADLRGKKV
AVGKGSSAHGHLLLQLQKANLTIKDIQPVFLQPADAFTALSQGQADAWAIWDPYTALAQKQLKVRTLVTATGVSNGYGFG
VASQVALRDAQRNTALSDVVQRIARASAWARAHPQEWYGKYAAAIGIDPAAGELAQSRSLRLPIPLNAEVSASEQQLADL
FAQSGQIQGKPTFSDFIDSRFDNVLKQFFTPSQ
>Mature_352_residues
TPKPRTTEESSLHSWVFKSIVSATAVVLSLTACTTGRDDKGDAAAPALVPLSGLSNLTLRVGDQKGGTESLLRAAGELDN
VPYKIEFSTFTFGPPQIEALTAGKIDFAVTGNTPPIFGAASKARIKVVSGYTNDASGDQILVADASPIRSVADLRGKKVA
VGKGSSAHGHLLLQLQKANLTIKDIQPVFLQPADAFTALSQGQADAWAIWDPYTALAQKQLKVRTLVTATGVSNGYGFGV
ASQVALRDAQRNTALSDVVQRIARASAWARAHPQEWYGKYAAAIGIDPAAGELAQSRSLRLPIPLNAEVSASEQQLADLF
AQSGQIQGKPTFSDFIDSRFDNVLKQFFTPSQ

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]

Homologues:

Organism=Escherichia coli, GI87081803, Length=270, Percent_Identity=39.2592592592593, Blast_Score=160, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010067
- InterPro:   IPR015168
- InterPro:   IPR001638 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 37423; Mature: 37291

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPKPRTTEESSLHSWVFKSIVSATAVVLSLTACTTGRDDKGDAAAPALVPLSGLSNLTL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCEEE
RVGDQKGGTESLLRAAGELDNVPYKIEFSTFTFGPPQIEALTAGKIDFAVTGNTPPIFGA
EECCCCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEECCCEEEEEECCCCCCCCC
ASKARIKVVSGYTNDASGDQILVADASPIRSVADLRGKKVAVGKGSSAHGHLLLQLQKAN
CCCCEEEEEECCCCCCCCCEEEEECCCHHHHHHHCCCCEEEECCCCCCCCEEEEEEECCC
LTIKDIQPVFLQPADAFTALSQGQADAWAIWDPYTALAQKQLKVRTLVTATGVSNGYGFG
EEEECCCCEEECCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHEEEEEECCCCCCCCCC
VASQVALRDAQRNTALSDVVQRIARASAWARAHPQEWYGKYAAAIGIDPAAGELAQSRSL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCHHHHHHCCCC
RLPIPLNAEVSASEQQLADLFAQSGQIQGKPTFSDFIDSRFDNVLKQFFTPSQ
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TPKPRTTEESSLHSWVFKSIVSATAVVLSLTACTTGRDDKGDAAAPALVPLSGLSNLTL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCEEE
RVGDQKGGTESLLRAAGELDNVPYKIEFSTFTFGPPQIEALTAGKIDFAVTGNTPPIFGA
EECCCCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEECCCEEEEEECCCCCCCCC
ASKARIKVVSGYTNDASGDQILVADASPIRSVADLRGKKVAVGKGSSAHGHLLLQLQKAN
CCCCEEEEEECCCCCCCCCEEEEECCCHHHHHHHCCCCEEEECCCCCCCCEEEEEEECCC
LTIKDIQPVFLQPADAFTALSQGQADAWAIWDPYTALAQKQLKVRTLVTATGVSNGYGFG
EEEECCCCEEECCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHEEEEEECCCCCCCCCC
VASQVALRDAQRNTALSDVVQRIARASAWARAHPQEWYGKYAAAIGIDPAAGELAQSRSL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCHHHHHHCCCC
RLPIPLNAEVSASEQQLADLFAQSGQIQGKPTFSDFIDSRFDNVLKQFFTPSQ
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]