Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

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The map label for this gene is 169629250

Identifier: 169629250

GI number: 169629250

Start: 2178537

End: 2179286

Strand: Direct

Name: 169629250

Synonym: MAB_2164

Alternate gene names: NA

Gene position: 2178537-2179286 (Clockwise)

Preceding gene: 169629249

Following gene: 169629251

Centisome position: 42.99

GC content: 65.2

Gene sequence:

>750_bases
ATGACTATCGAACATGTCTATGCCGACTGGGACGCCGCGTATGTACTCGGCGCGTTGTCGTCGACCGAACGGCGTGAATA
CGAGCAGCATCTGGTCGATTGCGTCAGCTGCCAACGCGCACTGTCTGAGGTGACCGCCATGCCCGGTCTGCTCTCGAAGG
TTGATCGAGGCTATGCCGAGAAGATGGAGCTCGAGGACCCACCGGTACTCGCCAAGCCGGCCACCAGCTGCCCGGTGCAA
GCGCTGTGGCCAAAGCTGCAGGCCCGTTGGCGGCGACAGAGCGCCGTGCGCCGACTGGCCTATGTGGGCGCTGTCGCGGT
GGCCGCGGCCGTTGCACTGACTGTTTCGTTGGTGCCGCCTCCGTGGTACCACCGGCCCGCACCGATGAATGTGGCGGCGG
GCTCACTGCCCGCAGGAGAGCATTGGCAGCCGATGCGCCAGGTCACACCCTCACCGTTGAGCGCGCAGGTCGCACTGGTG
CGGGACGGCACCGGCACCCGCATTGAAATGTGGTGCAGCTATCCGGTGTACGGCGACGATGCCGATGACTCGGCGGCGGC
ACCGTACGCGCTGCGGATCGGCACGCGCACTGGCCAGAGCATCATCGCCAGTTCGTGGACCGCCAAACCCGGCTCGACGC
TGATGACGTCGACGACTGTTCCGATGGCGCAGGACCAGATCGAGAGCATCCAGGTGATCGACAATCACGGCGACGCGTCG
CCGCTCGTGTTCCTCGAATTGCATCGCTGA

Upstream 100 bases:

>100_bases
TATCCGCTGAGCTGGGGGTGCCGGAGGGCACCGTCAAATCACGCCTTCACTATGGTGTGCGCGCACTTCGGTTGTCGCTG
CAGGAAATGGGGGTCACGCG

Downstream 100 bases:

>100_bases
CGTCTTCCCTGTCGCGCACGTGAGGCTTTGACGTGCACATCTTCATTAACCTGAAACTCGATTCATGTTGTGCCATCACA
TGATTGAGATAACTCGATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MTIEHVYADWDAAYVLGALSSTERREYEQHLVDCVSCQRALSEVTAMPGLLSKVDRGYAEKMELEDPPVLAKPATSCPVQ
ALWPKLQARWRRQSAVRRLAYVGAVAVAAAVALTVSLVPPPWYHRPAPMNVAAGSLPAGEHWQPMRQVTPSPLSAQVALV
RDGTGTRIEMWCSYPVYGDDADDSAAAPYALRIGTRTGQSIIASSWTAKPGSTLMTSTTVPMAQDQIESIQVIDNHGDAS
PLVFLELHR

Sequences:

>Translated_249_residues
MTIEHVYADWDAAYVLGALSSTERREYEQHLVDCVSCQRALSEVTAMPGLLSKVDRGYAEKMELEDPPVLAKPATSCPVQ
ALWPKLQARWRRQSAVRRLAYVGAVAVAAAVALTVSLVPPPWYHRPAPMNVAAGSLPAGEHWQPMRQVTPSPLSAQVALV
RDGTGTRIEMWCSYPVYGDDADDSAAAPYALRIGTRTGQSIIASSWTAKPGSTLMTSTTVPMAQDQIESIQVIDNHGDAS
PLVFLELHR
>Mature_248_residues
TIEHVYADWDAAYVLGALSSTERREYEQHLVDCVSCQRALSEVTAMPGLLSKVDRGYAEKMELEDPPVLAKPATSCPVQA
LWPKLQARWRRQSAVRRLAYVGAVAVAAAVALTVSLVPPPWYHRPAPMNVAAGSLPAGEHWQPMRQVTPSPLSAQVALVR
DGTGTRIEMWCSYPVYGDDADDSAAAPYALRIGTRTGQSIIASSWTAKPGSTLMTSTTVPMAQDQIESIQVIDNHGDASP
LVFLELHR

Specific function: Unknown

COG id: COG5662

COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27094; Mature: 26963

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIEHVYADWDAAYVLGALSSTERREYEQHLVDCVSCQRALSEVTAMPGLLSKVDRGYAE
CCCEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHH
KMELEDPPVLAKPATSCPVQALWPKLQARWRRQSAVRRLAYVGAVAVAAAVALTVSLVPP
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
PWYHRPAPMNVAAGSLPAGEHWQPMRQVTPSPLSAQVALVRDGTGTRIEMWCSYPVYGDD
CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCC
ADDSAAAPYALRIGTRTGQSIIASSWTAKPGSTLMTSTTVPMAQDQIESIQVIDNHGDAS
CCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCEEEEECCCCCHHHHHHHEEEECCCCCCC
PLVFLELHR
CEEEEEECC
>Mature Secondary Structure 
TIEHVYADWDAAYVLGALSSTERREYEQHLVDCVSCQRALSEVTAMPGLLSKVDRGYAE
CCEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHH
KMELEDPPVLAKPATSCPVQALWPKLQARWRRQSAVRRLAYVGAVAVAAAVALTVSLVPP
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
PWYHRPAPMNVAAGSLPAGEHWQPMRQVTPSPLSAQVALVRDGTGTRIEMWCSYPVYGDD
CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCC
ADDSAAAPYALRIGTRTGQSIIASSWTAKPGSTLMTSTTVPMAQDQIESIQVIDNHGDAS
CCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCEEEEECCCCCHHHHHHHEEEECCCCCCC
PLVFLELHR
CEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA