Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169629198
Identifier: 169629198
GI number: 169629198
Start: 2110916
End: 2111842
Strand: Direct
Name: 169629198
Synonym: MAB_2112
Alternate gene names: NA
Gene position: 2110916-2111842 (Clockwise)
Preceding gene: 169629197
Following gene: 169629199
Centisome position: 41.66
GC content: 66.99
Gene sequence:
>927_bases ATGACGGGGCCGAATGACCCGTACCAGTACGGCGGAACCGGACAGTGGGGTGCACCGGAGGGGCAATGGCAGGGTGCACC GCCGGCGCAAGGCCAGTACGGATACGCACAGGAGTACTTCGGGCAGGCGCCCGCGGACTACCCAGACGATTCGATAGGCC GGCTGTATGACGGAGTGCCGCAGGGCTATGCGGTCCCGCCCATGTATCCGGGGCTCCCGGGCCAGGACCCGTTCGGGCCG CAGAAGAAATCCAAGCCATGGCTTCTGATCGCTTCCGTCGCGGGTGCGGTCGTTGTCGTCCTCGCGTTGGTGTTGGTGCT GATTCTCAACCGGGATAGCGATCCGCGACAGGCAGCCAGCTCGCCGACCACCACCACAGTGTCGTATGCGAACCCCGAGC TGCCGACGGCAGGCGGCGCACCGACCTACCACCCGCCCACTGCCCAGCCACCCACCGCGCAGATACCGCCACCGGCGCCA CCGCAGATGCCGGTGCCGCCGCCCGCGCCGACGGGCCCGCCCAGGGCGCCCGGACAGGTCGCGTCCGTCGGTGACTGCAT TGCTTTGGCGGCTCCCTCGGACTACAAGACGGTGGCGTGTACCGACCCCACGGCGGCCTGGCGCGTGATTGAGGTGGTTC CGGGCGGCAAGTGCCGACAGACGTACACGGGATTCACCGCCGGTGATTTTTCGTACTGCATTGCTCCGCAGCTACGTGTG GGCTCCTGCTATCAGACGGCCGTGGTGATGGGTAGCACGGTCTTTGTGGCCGCCGACTCGTGTCAGGCGCCCAAGGCGTT CGTCGTGTTGTTCGTCATTCCGGGGACGAAGGAGGCATCGCAGTGCAAGGGAAAGCCCGGCGTTGTGCACTCCTTCGCGT TCCCCGATCCGCCGATGGCGATTTGCACCGGCGAATTCGCGCCGTGA
Upstream 100 bases:
>100_bases CGATCGCAACAGGCCCATACCGTGGCCCGCCTTTTGATTGCCGATCGTCTAGCCTGGTCGGCAACGCGTCCGTGGGAAAC GGGGCAGAGGGGGTGCGAAC
Downstream 100 bases:
>100_bases TCTTGAAAACTGGGATCAGTCGACTATCGGGAAATGGCTTCCCGCCAGCGCGAATGGACTCATAAGATCGTCTCCTTGCC AGAGGGGAAATTATGATCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MTGPNDPYQYGGTGQWGAPEGQWQGAPPAQGQYGYAQEYFGQAPADYPDDSIGRLYDGVPQGYAVPPMYPGLPGQDPFGP QKKSKPWLLIASVAGAVVVVLALVLVLILNRDSDPRQAASSPTTTTVSYANPELPTAGGAPTYHPPTAQPPTAQIPPPAP PQMPVPPPAPTGPPRAPGQVASVGDCIALAAPSDYKTVACTDPTAAWRVIEVVPGGKCRQTYTGFTAGDFSYCIAPQLRV GSCYQTAVVMGSTVFVAADSCQAPKAFVVLFVIPGTKEASQCKGKPGVVHSFAFPDPPMAICTGEFAP
Sequences:
>Translated_308_residues MTGPNDPYQYGGTGQWGAPEGQWQGAPPAQGQYGYAQEYFGQAPADYPDDSIGRLYDGVPQGYAVPPMYPGLPGQDPFGP QKKSKPWLLIASVAGAVVVVLALVLVLILNRDSDPRQAASSPTTTTVSYANPELPTAGGAPTYHPPTAQPPTAQIPPPAP PQMPVPPPAPTGPPRAPGQVASVGDCIALAAPSDYKTVACTDPTAAWRVIEVVPGGKCRQTYTGFTAGDFSYCIAPQLRV GSCYQTAVVMGSTVFVAADSCQAPKAFVVLFVIPGTKEASQCKGKPGVVHSFAFPDPPMAICTGEFAP >Mature_307_residues TGPNDPYQYGGTGQWGAPEGQWQGAPPAQGQYGYAQEYFGQAPADYPDDSIGRLYDGVPQGYAVPPMYPGLPGQDPFGPQ KKSKPWLLIASVAGAVVVVLALVLVLILNRDSDPRQAASSPTTTTVSYANPELPTAGGAPTYHPPTAQPPTAQIPPPAPP QMPVPPPAPTGPPRAPGQVASVGDCIALAAPSDYKTVACTDPTAAWRVIEVVPGGKCRQTYTGFTAGDFSYCIAPQLRVG SCYQTAVVMGSTVFVAADSCQAPKAFVVLFVIPGTKEASQCKGKPGVVHSFAFPDPPMAICTGEFAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31958; Mature: 31827
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: PS00139 THIOL_PROTEASE_CYS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPNDPYQYGGTGQWGAPEGQWQGAPPAQGQYGYAQEYFGQAPADYPDDSIGRLYDGVP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHCCCC QGYAVPPMYPGLPGQDPFGPQKKSKPWLLIASVAGAVVVVLALVLVLILNRDSDPRQAAS CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC SPTTTTVSYANPELPTAGGAPTYHPPTAQPPTAQIPPPAPPQMPVPPPAPTGPPRAPGQV CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH ASVGDCIALAAPSDYKTVACTDPTAAWRVIEVVPGGKCRQTYTGFTAGDFSYCIAPQLRV HCCCCEEEEECCCCCCEEEECCCCCCEEEEEECCCCCCCCEECCCCCCCCEEEECCCCCC GSCYQTAVVMGSTVFVAADSCQAPKAFVVLFVIPGTKEASQCKGKPGVVHSFAFPDPPMA CCHHHHHHHHCCEEEEEECCCCCCCEEEEEEEECCCCHHHHHCCCCCEEEECCCCCCCEE ICTGEFAP EECCCCCC >Mature Secondary Structure TGPNDPYQYGGTGQWGAPEGQWQGAPPAQGQYGYAQEYFGQAPADYPDDSIGRLYDGVP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHCCCC QGYAVPPMYPGLPGQDPFGPQKKSKPWLLIASVAGAVVVVLALVLVLILNRDSDPRQAAS CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC SPTTTTVSYANPELPTAGGAPTYHPPTAQPPTAQIPPPAPPQMPVPPPAPTGPPRAPGQV CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH ASVGDCIALAAPSDYKTVACTDPTAAWRVIEVVPGGKCRQTYTGFTAGDFSYCIAPQLRV HCCCCEEEEECCCCCCEEEECCCCCCEEEEEECCCCCCCCEECCCCCCCCEEEECCCCCC GSCYQTAVVMGSTVFVAADSCQAPKAFVVLFVIPGTKEASQCKGKPGVVHSFAFPDPPMA CCHHHHHHHHCCEEEEEECCCCCCCEEEEEEEECCCCHHHHHCCCCCEEEECCCCCCCEE ICTGEFAP EECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA