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The map label for this gene is ygdL [C]

Identifier: 169629179

GI number: 169629179

Start: 2093286

End: 2095061

Strand: Direct

Name: ygdL [C]

Synonym: MAB_2093

Alternate gene names: 169629179

Gene position: 2093286-2095061 (Clockwise)

Preceding gene: 169629178

Following gene: 169629180

Centisome position: 41.31

GC content: 63.57

Gene sequence:

>1776_bases
GTGACCAGACGCCACCAGCCCACGCTGACGGGCTGGCAGAAGCATCTCCTCGCCGAACTCAAAGCGCTAGCGCAACAACG
TCCCAACGAAATCCAGGTCCGAGGAAGACCCACGCTCGACGCTAGCGGCGAGGCGTCGCTCCGCATCTCGCTACGCACGG
CCGCCATCCCGCATCATCCGGGTGGCCTGCAACTTCAAGAGACCGAGGAGTTCATCCTTCAGCTTCGCCCCTCTTCGTAC
TCGCTACCGGCTATCGACGTTGATCACACTCGGTTTCTCGGCTACCCCCATGTGCTCGCGGGTCAACGACTATGCATCTA
TTTGGATCCTTCACGGGAATGGCAGCCGACGCTTGGTGTGGCCGGCCTACTCACCCGCCTTTGGGACTGGCTCGTCGACG
CGGCCGCCGGAAACTTCCACGCCGCCACCGCCATGTACCACGCTGTTGGCGGAGTGCCGCATCAGGCACATGACACACCG
ACGATCGTTACCCGAGAACCCGGACCGGCGAAGCGCCACCAAACGGCTCACCTGATCGCCCGGTCAACGCACCGATACGA
CCTGACGTACTCGCCTGGAGCTGCCGGGCATCGCGTACCGGTAATTACCCTGGCCACCGCGCTGCCGTTCGGTGCCGCAT
CCACATTCGCGCTACTGCTTGCTCTCCTGGACGACCCCTACCTTGACCGCCTCGAAGGACGGGCTCCCCGGATCGCACCG
CAATCGCCGGCGTTCCTCACCGCCCTCCTGGCGAGTGCGTTACGAAATCACCACGACGCCGAGCAATACTTCGTCCTCGC
CGTGCCGCACCCCGCTGGAGGCCCACCCCACCTCTTGGGCGGACGGCTCCCCACCCCAACGGCGAATGCGCTCCGCGAGG
TCGCGCAGCAACGGGGTGTGGGGATTGTTCTCGACCCCGCGAAGATCAACACTGAAATCCCGATTGAGTGGTGCAGGATG
TCCGACGAACGACCCGAAGTGACAACCCGTCGCGACGACGGCCGCCCCGTGAACGGATTTCAAGGAAAGACTGTCCACAT
CTGGGGCTGCGGCGGGCTCGGATCATGGATCGCCGAATTCATCGCTCGCGCAGGAGCATCGGAGATCACCGTGTGCGACC
CTGGCATCGTCACCGGCGGCTTGCTCGTCCGACAAAACTACGTCGAAGACGACATTGGCCGTTCCAAAGCCGAGGCACTC
GCTGGACGGCTCCGCGCGATCCGTGATGACCTGACGGTCACCGTCGCAGAAGGGCACCTCCCAGAAGACCACACGTCATG
CCTGGCAGCGGATCTCATCATCGACGCCACAGTGAACAACGGCATCACGAGCTGTCTCGATGCGTTGGCAACTGCGCCGA
CGCGAAAGGCATTGATCGCTCAGGTCGCCACAGACGCTCGCTCTGGCACGCTCGGCCTAGCCGTGCTGTGCGCCGCAAGC
GCAACAGCGACAGTTTCCAGCATCGATCAAGACGCTGGCCGAACAATCCAGGGCGACAGCGGACTTGAGCTCTACCACAC
GCTGTGGCAAGAACCCAGCGATGACGAACTTATACCAACCAGGGGCTGCTCGGTCCCCACATTCCACGGCTCGGCAGCCG
ACCTCGTAGCGGTCGCAGCCACACTCGTCAACCTGATCGGAAGCCACCTCCAACAACCGGACTCCGCGGTTTCGGGCACA
CACCTCATCGCTCTGCCGCACGCGGCCAGCGGCCCCCGACACCACTTCCTCCCCGGTGTAACGCACCCCATGGATCACAC
AGCAGGGACAGAATGA

Upstream 100 bases:

>100_bases
GCGACGGATTCAAGGCGCCGGCCACAACAACCGCTAGCGCGAAGTTTCCAGCAGCCACCTCTGCCGCGGACTCAACAGTG
GGGCGCTCTGGTCGGGCAGG

Downstream 100 bases:

>100_bases
GGGCAACGGAACGTCAACGCAATGCCCCATCAGAGGGCGTCATTGTCGAGCGTCTTCGCACCGAGGCAACCAACTGGATC
AACGCCGTGGCGCTCCAATC

Product: UBA/THIF-type NAD/FAD binding fold

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 591; Mature: 590

Protein sequence:

>591_residues
MTRRHQPTLTGWQKHLLAELKALAQQRPNEIQVRGRPTLDASGEASLRISLRTAAIPHHPGGLQLQETEEFILQLRPSSY
SLPAIDVDHTRFLGYPHVLAGQRLCIYLDPSREWQPTLGVAGLLTRLWDWLVDAAAGNFHAATAMYHAVGGVPHQAHDTP
TIVTREPGPAKRHQTAHLIARSTHRYDLTYSPGAAGHRVPVITLATALPFGAASTFALLLALLDDPYLDRLEGRAPRIAP
QSPAFLTALLASALRNHHDAEQYFVLAVPHPAGGPPHLLGGRLPTPTANALREVAQQRGVGIVLDPAKINTEIPIEWCRM
SDERPEVTTRRDDGRPVNGFQGKTVHIWGCGGLGSWIAEFIARAGASEITVCDPGIVTGGLLVRQNYVEDDIGRSKAEAL
AGRLRAIRDDLTVTVAEGHLPEDHTSCLAADLIIDATVNNGITSCLDALATAPTRKALIAQVATDARSGTLGLAVLCAAS
ATATVSSIDQDAGRTIQGDSGLELYHTLWQEPSDDELIPTRGCSVPTFHGSAADLVAVAATLVNLIGSHLQQPDSAVSGT
HLIALPHAASGPRHHFLPGVTHPMDHTAGTE

Sequences:

>Translated_591_residues
MTRRHQPTLTGWQKHLLAELKALAQQRPNEIQVRGRPTLDASGEASLRISLRTAAIPHHPGGLQLQETEEFILQLRPSSY
SLPAIDVDHTRFLGYPHVLAGQRLCIYLDPSREWQPTLGVAGLLTRLWDWLVDAAAGNFHAATAMYHAVGGVPHQAHDTP
TIVTREPGPAKRHQTAHLIARSTHRYDLTYSPGAAGHRVPVITLATALPFGAASTFALLLALLDDPYLDRLEGRAPRIAP
QSPAFLTALLASALRNHHDAEQYFVLAVPHPAGGPPHLLGGRLPTPTANALREVAQQRGVGIVLDPAKINTEIPIEWCRM
SDERPEVTTRRDDGRPVNGFQGKTVHIWGCGGLGSWIAEFIARAGASEITVCDPGIVTGGLLVRQNYVEDDIGRSKAEAL
AGRLRAIRDDLTVTVAEGHLPEDHTSCLAADLIIDATVNNGITSCLDALATAPTRKALIAQVATDARSGTLGLAVLCAAS
ATATVSSIDQDAGRTIQGDSGLELYHTLWQEPSDDELIPTRGCSVPTFHGSAADLVAVAATLVNLIGSHLQQPDSAVSGT
HLIALPHAASGPRHHFLPGVTHPMDHTAGTE
>Mature_590_residues
TRRHQPTLTGWQKHLLAELKALAQQRPNEIQVRGRPTLDASGEASLRISLRTAAIPHHPGGLQLQETEEFILQLRPSSYS
LPAIDVDHTRFLGYPHVLAGQRLCIYLDPSREWQPTLGVAGLLTRLWDWLVDAAAGNFHAATAMYHAVGGVPHQAHDTPT
IVTREPGPAKRHQTAHLIARSTHRYDLTYSPGAAGHRVPVITLATALPFGAASTFALLLALLDDPYLDRLEGRAPRIAPQ
SPAFLTALLASALRNHHDAEQYFVLAVPHPAGGPPHLLGGRLPTPTANALREVAQQRGVGIVLDPAKINTEIPIEWCRMS
DERPEVTTRRDDGRPVNGFQGKTVHIWGCGGLGSWIAEFIARAGASEITVCDPGIVTGGLLVRQNYVEDDIGRSKAEALA
GRLRAIRDDLTVTVAEGHLPEDHTSCLAADLIIDATVNNGITSCLDALATAPTRKALIAQVATDARSGTLGLAVLCAASA
TATVSSIDQDAGRTIQGDSGLELYHTLWQEPSDDELIPTRGCSVPTFHGSAADLVAVAATLVNLIGSHLQQPDSAVSGTH
LIALPHAASGPRHHFLPGVTHPMDHTAGTE

Specific function: Unknown

COG id: COG0476

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63168; Mature: 63037

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRHQPTLTGWQKHLLAELKALAQQRPNEIQVRGRPTLDASGEASLRISLRTAAIPHHP
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCCC
GGLQLQETEEFILQLRPSSYSLPAIDVDHTRFLGYPHVLAGQRLCIYLDPSREWQPTLGV
CCCEEHHHHHHHEEECCCCCCCCEECCCCHHHCCCCHHHCCCEEEEEECCCCCCCCCCCH
AGLLTRLWDWLVDAAAGNFHAATAMYHAVGGVPHQAHDTPTIVTREPGPAKRHQTAHLIA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHH
RSTHRYDLTYSPGAAGHRVPVITLATALPFGAASTFALLLALLDDPYLDRLEGRAPRIAP
HCCCEEEEEECCCCCCCCCEEEEEEHHCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCC
QSPAFLTALLASALRNHHDAEQYFVLAVPHPAGGPPHLLGGRLPTPTANALREVAQQRGV
CCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCC
GIVLDPAKINTEIPIEWCRMSDERPEVTTRRDDGRPVNGFQGKTVHIWGCGGLGSWIAEF
EEEECCHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHH
IARAGASEITVCDPGIVTGGLLVRQNYVEDDIGRSKAEALAGRLRAIRDDLTVTVAEGHL
HHHCCCCEEEEECCCCCCCCHHEECCHHHHHHCHHHHHHHHHHHHHHHCCCEEEEECCCC
PEDHTSCLAADLIIDATVNNGITSCLDALATAPTRKALIAQVATDARSGTLGLAVLCAAS
CCHHHHHHHHHHEEEEHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHC
ATATVSSIDQDAGRTIQGDSGLELYHTLWQEPSDDELIPTRGCSVPTFHGSAADLVAVAA
CHHHHHHHHHHCCCEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
TLVNLIGSHLQQPDSAVSGTHLIALPHAASGPRHHFLPGVTHPMDHTAGTE
HHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TRRHQPTLTGWQKHLLAELKALAQQRPNEIQVRGRPTLDASGEASLRISLRTAAIPHHP
CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCCC
GGLQLQETEEFILQLRPSSYSLPAIDVDHTRFLGYPHVLAGQRLCIYLDPSREWQPTLGV
CCCEEHHHHHHHEEECCCCCCCCEECCCCHHHCCCCHHHCCCEEEEEECCCCCCCCCCCH
AGLLTRLWDWLVDAAAGNFHAATAMYHAVGGVPHQAHDTPTIVTREPGPAKRHQTAHLIA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHH
RSTHRYDLTYSPGAAGHRVPVITLATALPFGAASTFALLLALLDDPYLDRLEGRAPRIAP
HCCCEEEEEECCCCCCCCCEEEEEEHHCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCC
QSPAFLTALLASALRNHHDAEQYFVLAVPHPAGGPPHLLGGRLPTPTANALREVAQQRGV
CCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCC
GIVLDPAKINTEIPIEWCRMSDERPEVTTRRDDGRPVNGFQGKTVHIWGCGGLGSWIAEF
EEEECCHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHH
IARAGASEITVCDPGIVTGGLLVRQNYVEDDIGRSKAEALAGRLRAIRDDLTVTVAEGHL
HHHCCCCEEEEECCCCCCCCHHEECCHHHHHHCHHHHHHHHHHHHHHHCCCEEEEECCCC
PEDHTSCLAADLIIDATVNNGITSCLDALATAPTRKALIAQVATDARSGTLGLAVLCAAS
CCHHHHHHHHHHEEEEHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHC
ATATVSSIDQDAGRTIQGDSGLELYHTLWQEPSDDELIPTRGCSVPTFHGSAADLVAVAA
CHHHHHHHHHHCCCEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
TLVNLIGSHLQQPDSAVSGTHLIALPHAASGPRHHFLPGVTHPMDHTAGTE
HHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA