Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

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The map label for this gene is 169628894

Identifier: 169628894

GI number: 169628894

Start: 1809368

End: 1810741

Strand: Direct

Name: 169628894

Synonym: MAB_1805

Alternate gene names: NA

Gene position: 1809368-1810741 (Clockwise)

Preceding gene: 169628893

Following gene: 169628895

Centisome position: 35.71

GC content: 62.37

Gene sequence:

>1374_bases
ATGGCCGTCCTACGCGCGAATGTTGAGTTCGCGAAGCGGATTTTCCAGGACCGCGTCGGCAACGACTACGTGTACGGCGG
CAACTGGAATCCGTTCAACCTCAAGGTCGGTACCGACTGCTCCGGTCTGGTCATTGACATCTGCGACGCTGTGCGCAACG
GGACCGCGATGGCCTGGACCCGGCATGGGATGTCCACCGAGAGCTGGCGTCCGATCGAGGTAGGTCAGACCGGAACGATC
TTCAACACCATATGCGTGGCGTCGCCGAATGACTTCCCGGCTGATGCTGCGGTGAAGATCGCCATCCATCACGGCCCCGG
CGGTGGGGCGAACAGTCACATGTGGTGTGAGGTTGAGGGAATCCGCATGGAGTCCAACGGCTCCGATGGGTGTGTGACCG
GGAACCAGGCGCGGTCCGTGTACGACACGAGCTATGCGAACGACTGGCACTACCTGCCCGGACCCATCACAGGCCAGGTA
GGTGTCGATCCCGCAGGAGTGCTGGCACGTGCCACCGGGCTAAGTGTCGCGAGGGCTTCGCAGATCCTACCCGCGGTGTC
GGACGGGCTCAAGGCTAGTCAGTGCACGAACGTCAATCGGATCGCGATGTGGCTGGCGCAGGTCGGCCACGAGTCAGCCG
GCTTCAATGCCACCGAAGAGTATGCCTCCGGTGCCGCCTATGAAGGGCGTGCAGATCTGGGTAACACCCAACCCGGGGAT
GGGGTGCGGTTCAAGGGCCGCAGCTGGATTCAGATCACCGGCCGCAACAACTACGCAGCGTTCTCGCGGTGGTGTTCGGG
TAAAGGACTCGTTCTGTCGCCAACGGAATTCGTTGATAACCCGAACCGACTGGCCGAACTGCGGTGGGCCGGTATAGGTG
CGGCTTGGTACTGGACGGTCGCCCGCCCGGACATCAACGCCCTGTCGGATCGGCAGGACTTAGAGACCGTCACGCGCCGA
ATCAACGGCGGCACCAACGGCTTGGCTGATCGTCGCGACCGATACAACCGCGCCCTACTCCAGGGCGATGCGCTTCTGCA
ACTACTCACTGAACCGCTGGACCCGATTGAGGAGCTACTGATGTCAGACCTTCAGGTCGAATCCCTATCCATCTACGCCA
CCCCAGGTGAGCCGTTGATCCCGATTGTTCGCATGGTGCAGGCCATCGACGCCGCGGAGCACCGCAAGCTCGTCGAGGAC
TGGGCGCGCACCGGGGATGCAGACGCACTATCCCGTATCGCCCGCACCGCGGCGGGGCAAGGGAAGTTCCGTGACGCCGC
CACCATCGCACACGCCAAAGCCGTGCTCGCTGACATTGAAGCCACTAACCCTGCAGTCCTGCAGGAGTTCATCTCTCAGA
AGGGACAATCATGA

Upstream 100 bases:

>100_bases
GCGGGTCGACCAGGGCTCGATCCCCGGATCGGAGGCATCTAGTGAATTGGTTGCGCCGCAAGATCAATGAGTGGCTGGCC
GCGATCTGGTGGTCGTACTA

Downstream 100 bases:

>100_bases
CCGCCCAGATTCGCAAGTGGTACTACCTCATCGGCGCACTGGTGACAGCGCTCGTGCCGATTCTGGTGACCTCCGGTGTC
GTCAGTGACACCCAGGGCAA

Product: bacteriophage protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MAVLRANVEFAKRIFQDRVGNDYVYGGNWNPFNLKVGTDCSGLVIDICDAVRNGTAMAWTRHGMSTESWRPIEVGQTGTI
FNTICVASPNDFPADAAVKIAIHHGPGGGANSHMWCEVEGIRMESNGSDGCVTGNQARSVYDTSYANDWHYLPGPITGQV
GVDPAGVLARATGLSVARASQILPAVSDGLKASQCTNVNRIAMWLAQVGHESAGFNATEEYASGAAYEGRADLGNTQPGD
GVRFKGRSWIQITGRNNYAAFSRWCSGKGLVLSPTEFVDNPNRLAELRWAGIGAAWYWTVARPDINALSDRQDLETVTRR
INGGTNGLADRRDRYNRALLQGDALLQLLTEPLDPIEELLMSDLQVESLSIYATPGEPLIPIVRMVQAIDAAEHRKLVED
WARTGDADALSRIARTAAGQGKFRDAATIAHAKAVLADIEATNPAVLQEFISQKGQS

Sequences:

>Translated_457_residues
MAVLRANVEFAKRIFQDRVGNDYVYGGNWNPFNLKVGTDCSGLVIDICDAVRNGTAMAWTRHGMSTESWRPIEVGQTGTI
FNTICVASPNDFPADAAVKIAIHHGPGGGANSHMWCEVEGIRMESNGSDGCVTGNQARSVYDTSYANDWHYLPGPITGQV
GVDPAGVLARATGLSVARASQILPAVSDGLKASQCTNVNRIAMWLAQVGHESAGFNATEEYASGAAYEGRADLGNTQPGD
GVRFKGRSWIQITGRNNYAAFSRWCSGKGLVLSPTEFVDNPNRLAELRWAGIGAAWYWTVARPDINALSDRQDLETVTRR
INGGTNGLADRRDRYNRALLQGDALLQLLTEPLDPIEELLMSDLQVESLSIYATPGEPLIPIVRMVQAIDAAEHRKLVED
WARTGDADALSRIARTAAGQGKFRDAATIAHAKAVLADIEATNPAVLQEFISQKGQS
>Mature_456_residues
AVLRANVEFAKRIFQDRVGNDYVYGGNWNPFNLKVGTDCSGLVIDICDAVRNGTAMAWTRHGMSTESWRPIEVGQTGTIF
NTICVASPNDFPADAAVKIAIHHGPGGGANSHMWCEVEGIRMESNGSDGCVTGNQARSVYDTSYANDWHYLPGPITGQVG
VDPAGVLARATGLSVARASQILPAVSDGLKASQCTNVNRIAMWLAQVGHESAGFNATEEYASGAAYEGRADLGNTQPGDG
VRFKGRSWIQITGRNNYAAFSRWCSGKGLVLSPTEFVDNPNRLAELRWAGIGAAWYWTVARPDINALSDRQDLETVTRRI
NGGTNGLADRRDRYNRALLQGDALLQLLTEPLDPIEELLMSDLQVESLSIYATPGEPLIPIVRMVQAIDAAEHRKLVEDW
ARTGDADALSRIARTAAGQGKFRDAATIAHAKAVLADIEATNPAVLQEFISQKGQS

Specific function: Unknown

COG id: COG3179

COG function: function code R; Predicted chitinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To phage D29 and phage L5 gp10 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000726 [H]

Pfam domain/function: PF00182 Glyco_hydro_19 [H]

EC number: NA

Molecular weight: Translated: 49330; Mature: 49199

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVLRANVEFAKRIFQDRVGNDYVYGGNWNPFNLKVGTDCSGLVIDICDAVRNGTAMAWT
CCEEECCHHHHHHHHHHHCCCCEEECCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEE
RHGMSTESWRPIEVGQTGTIFNTICVASPNDFPADAAVKIAIHHGPGGGANSHMWCEVEG
ECCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEE
IRMESNGSDGCVTGNQARSVYDTSYANDWHYLPGPITGQVGVDPAGVLARATGLSVARAS
EEEECCCCCCCEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHH
QILPAVSDGLKASQCTNVNRIAMWLAQVGHESAGFNATEEYASGAAYEGRADLGNTQPGD
HHHHHHHCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCC
GVRFKGRSWIQITGRNNYAAFSRWCSGKGLVLSPTEFVDNPNRLAELRWAGIGAAWYWTV
CEEECCCCEEEEECCCCHHHHHHHCCCCCEEECCHHHHCCCCHHHHHEEECCCEEEEEEE
ARPDINALSDRQDLETVTRRINGGTNGLADRRDRYNRALLQGDALLQLLTEPLDPIEELL
ECCCCHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
MSDLQVESLSIYATPGEPLIPIVRMVQAIDAAEHRKLVEDWARTGDADALSRIARTAAGQ
HHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
GKFRDAATIAHAKAVLADIEATNPAVLQEFISQKGQS
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
AVLRANVEFAKRIFQDRVGNDYVYGGNWNPFNLKVGTDCSGLVIDICDAVRNGTAMAWT
CEEECCHHHHHHHHHHHCCCCEEECCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEE
RHGMSTESWRPIEVGQTGTIFNTICVASPNDFPADAAVKIAIHHGPGGGANSHMWCEVEG
ECCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEE
IRMESNGSDGCVTGNQARSVYDTSYANDWHYLPGPITGQVGVDPAGVLARATGLSVARAS
EEEECCCCCCCEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHH
QILPAVSDGLKASQCTNVNRIAMWLAQVGHESAGFNATEEYASGAAYEGRADLGNTQPGD
HHHHHHHCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCC
GVRFKGRSWIQITGRNNYAAFSRWCSGKGLVLSPTEFVDNPNRLAELRWAGIGAAWYWTV
CEEECCCCEEEEECCCCHHHHHHHCCCCCEEECCHHHHCCCCHHHHHEEECCCEEEEEEE
ARPDINALSDRQDLETVTRRINGGTNGLADRRDRYNRALLQGDALLQLLTEPLDPIEELL
ECCCCHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
MSDLQVESLSIYATPGEPLIPIVRMVQAIDAAEHRKLVEDWARTGDADALSRIARTAAGQ
HHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
GKFRDAATIAHAKAVLADIEATNPAVLQEFISQKGQS
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]