Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169628840
Identifier: 169628840
GI number: 169628840
Start: 1769668
End: 1770603
Strand: Direct
Name: 169628840
Synonym: MAB_1750
Alternate gene names: NA
Gene position: 1769668-1770603 (Clockwise)
Preceding gene: 169628839
Following gene: 169628841
Centisome position: 34.92
GC content: 58.55
Gene sequence:
>936_bases ATGGGCTGGATACGCGTCTCTGATGACTTCTACGACAACGACAAGTTCAGTGAAGTCGGACCACTGGGGGTGGCGCTGCA CTTCGCGGCGATGGGTTTCTGTAACCGGAACCTAACGGACGGATTCTTCAAAAAGAACAAGGCTCGACTTTTCCTTGACT TCGACGGCATCGGTATCACCACTAGTCAATCGGATTGCTTCGGTGTTGGCGTCGACGGTGATGACGCGGTGAAGTTGGTC ATCGAATGGATGATGGCATCAGAGCTTTGGCACGAGTGTGGCCATGGGTGCGAGGAATGTCATTCCCGCGAAGACGGCGG CGAACCTGGCGGCGATGAGTACCTGATCCACGACTACCTGAAGTTCCAGTTTTCGCGTCAGGAAATCGAGGAGAAGGCCG AGAAAGCTAGGGCGCGCAAGGAGGCCTGGAAGGCTAGGCAGGCGGTAGAACGTAGTTCGGAACAGCGTTCGGAACGGGGG AAGAACGGCGTTCGGAACGCTGCAGGAACGCTGGCGGAACACGACAACCCAACCCCAACCCCAACCCCAACCCCAACCCC AACGAAAGATTCATTCTTCGTTCCTCAGAATGAATCTTTAGGGGGGTCACCAAAACCGGGAACCTCACCAGAGCCCGAGT CGGCGTCAGCCCCGCGCTGCGCGCGCCACCCCTACGGAAATCCCGAAGACGAAAACTGCCGGGGCTGCAAGCGAGTCAAA GACGCCGAGAAGGCACAGGAACTCCAGGCCGAAATCGCAGAGAAGGCGGCACGCACAGCAGCAGCCGAGCGGCGACGCAA CTGCAAGCTCTGCGGCGGCAGCGGATGGATCGACCTCCCTGACGATTCCGGCGTCATCGACTGCGAATGCAAGACGCCCA TCCCAAATCTCCAGCTTGTCCATGACGCCACAAACCAAAGGAGGTCGGCATCGTGA
Upstream 100 bases:
>100_bases TGTGTCCGCGCCGCTGCGATGGGATTCGCTCACATCTGACCAGAAAGACACATGGCGGCGGATGGCTGCGCAGCGCCTCA ACGACCAGGAGGCGGTGTAG
Downstream 100 bases:
>100_bases CTACCCAAGCCATAACAGACATCAAAGAACTCGTAGGAGAAATGCCAGCGAGGGGATGTGAGTGGCCCAGCCACGCGTGT GATTCGCAGGCGCACTGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MGWIRVSDDFYDNDKFSEVGPLGVALHFAAMGFCNRNLTDGFFKKNKARLFLDFDGIGITTSQSDCFGVGVDGDDAVKLV IEWMMASELWHECGHGCEECHSREDGGEPGGDEYLIHDYLKFQFSRQEIEEKAEKARARKEAWKARQAVERSSEQRSERG KNGVRNAAGTLAEHDNPTPTPTPTPTPTKDSFFVPQNESLGGSPKPGTSPEPESASAPRCARHPYGNPEDENCRGCKRVK DAEKAQELQAEIAEKAARTAAAERRRNCKLCGGSGWIDLPDDSGVIDCECKTPIPNLQLVHDATNQRRSAS
Sequences:
>Translated_311_residues MGWIRVSDDFYDNDKFSEVGPLGVALHFAAMGFCNRNLTDGFFKKNKARLFLDFDGIGITTSQSDCFGVGVDGDDAVKLV IEWMMASELWHECGHGCEECHSREDGGEPGGDEYLIHDYLKFQFSRQEIEEKAEKARARKEAWKARQAVERSSEQRSERG KNGVRNAAGTLAEHDNPTPTPTPTPTPTKDSFFVPQNESLGGSPKPGTSPEPESASAPRCARHPYGNPEDENCRGCKRVK DAEKAQELQAEIAEKAARTAAAERRRNCKLCGGSGWIDLPDDSGVIDCECKTPIPNLQLVHDATNQRRSAS >Mature_310_residues GWIRVSDDFYDNDKFSEVGPLGVALHFAAMGFCNRNLTDGFFKKNKARLFLDFDGIGITTSQSDCFGVGVDGDDAVKLVI EWMMASELWHECGHGCEECHSREDGGEPGGDEYLIHDYLKFQFSRQEIEEKAEKARARKEAWKARQAVERSSEQRSERGK NGVRNAAGTLAEHDNPTPTPTPTPTPTKDSFFVPQNESLGGSPKPGTSPEPESASAPRCARHPYGNPEDENCRGCKRVKD AEKAQELQAEIAEKAARTAAAERRRNCKLCGGSGWIDLPDDSGVIDCECKTPIPNLQLVHDATNQRRSAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34294; Mature: 34163
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWIRVSDDFYDNDKFSEVGPLGVALHFAAMGFCNRNLTDGFFKKNKARLFLDFDGIGIT CCCEECCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEECCCEEE TSQSDCFGVGVDGDDAVKLVIEWMMASELWHECGHGCEECHSREDGGEPGGDEYLIHDYL CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHH KFQFSRQEIEEKAEKARARKEAWKARQAVERSSEQRSERGKNGVRNAAGTLAEHDNPTPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PTPTPTPTKDSFFVPQNESLGGSPKPGTSPEPESASAPRCARHPYGNPEDENCRGCKRVK CCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHH DAEKAQELQAEIAEKAARTAAAERRRNCKLCGGSGWIDLPDDSGVIDCECKTPIPNLQLV HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEECCCCCCEEEEECCCCCCCCEEE HDATNQRRSAS ECCHHHHCCCC >Mature Secondary Structure GWIRVSDDFYDNDKFSEVGPLGVALHFAAMGFCNRNLTDGFFKKNKARLFLDFDGIGIT CCEECCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEECCCEEE TSQSDCFGVGVDGDDAVKLVIEWMMASELWHECGHGCEECHSREDGGEPGGDEYLIHDYL CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHH KFQFSRQEIEEKAEKARARKEAWKARQAVERSSEQRSERGKNGVRNAAGTLAEHDNPTPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PTPTPTPTKDSFFVPQNESLGGSPKPGTSPEPESASAPRCARHPYGNPEDENCRGCKRVK CCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHH DAEKAQELQAEIAEKAARTAAAERRRNCKLCGGSGWIDLPDDSGVIDCECKTPIPNLQLV HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEECCCCCCEEEEECCCCCCCCEEE HDATNQRRSAS ECCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA