Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_010397 |
Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169628838
Identifier: 169628838
GI number: 169628838
Start: 1768279
End: 1769382
Strand: Direct
Name: 169628838
Synonym: MAB_1748
Alternate gene names: NA
Gene position: 1768279-1769382 (Clockwise)
Preceding gene: 169628837
Following gene: 169628839
Centisome position: 34.9
GC content: 59.51
Gene sequence:
>1104_bases ATGAGCGACCTGCGGGAAGGGCTACTTTTTCCCAACCTCCTAACCCGTTCTGAACGTCGTGAATTGGATCGCGAACCAGA GCCCAGATTCCTGTATCAGAGCATGGGCGCGGGGTGGCAGTCGACGGCTATAGCGCTCTTAGCGGCGCAGGGGGTCATTG AGAAGCCCCGGTTTGCGGTATTCGCCGATACCGGCTGGGAGCCACCGGAGGTATACGCGCATCTCGCTCGTCTAGATGAG GAGGTGTTGGCGCCGGCTGGGATAGCCCTGGTGCGCGTTCGGGCAGGGAGTATCTACGACGAGGCTTTGGACCCCCACTT TCCAAGATCCCTGCCGTTGTACACGAGGGACCCAAAGACTGGCGAGCCAGGCGGTATTACCAGCCGGGCCTGCACAACCA ACTTCAAGATGATCGCCATCTATCGGTGGTTGCGTGAGCAGTTGGGAGCCAAGGTAAGCGAGGGGTCCTGCACTTTCTGT AGCGGCGAGGGGCAGCGCAATGCCCCCTGGTTGGTGAAGTATGGACACGAAAAACCCTGGGGTATCTGCTCGGTCTGCCG GGGGACTGGCACTGTCCGGAAGGTTGGCGCGCCACCACAAGGGGTGTGGGCGCGCAGCTACGTGGGCTTCTCTGCTGATG AGATGGGCCGGATATCGCCGTCGCGCGTGTCCTACGCCTTCGACACTTTCCCTTTGGTTGGCAGGGATCAAAACGGCGAG GTTGTGCCGCCTGATCTTTCAATGTCTCGGCACGACTGCGGTGAGTACAACACGCGTCACGGATTCCCTGAGGTGATGAA GTCGGCGTGTATCGGCTGTCCGTGGCATTCGGACGCTGAGTGGATCCGCATCAAACAAGATGAGCGGCAGTGGCAGCAGG TTGTTGATCTGGACCGCAGTATCCGAAACACCCCCGGTTTAGACAACGAAGCCTTTCTCCATAAGAGCCGCATTCCTATT GAGGATGTGACTTTCGAGTCGGCGGATGACGTTGAGCGTCCCAGCTGCTCTCCGTACGGATGCCGTAGCGGGCTGGATAC CGATTCCGTGGCACCGCCCTCGCTTTTCGATGACGACTGGATCGATCTAGAGGAGACCGCATGA
Upstream 100 bases:
>100_bases CGGTAACACCGGAGGTGCAATCCGGGTGTGAGCACACATGCCTTATTGGGTCTGATCTTCTCGCCGCTGCTGCTGCGGCT GCACGTGATTCGGAGGAGCG
Downstream 100 bases:
>100_bases CCGACCTTTGTTCCTGCGGCCACGATCTCGATGAGCATCAACGTCACTACGGCACTTGTAAAGCCACTATCCCTGGTTCT TTTGAGCCTCTTTACCGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MSDLREGLLFPNLLTRSERRELDREPEPRFLYQSMGAGWQSTAIALLAAQGVIEKPRFAVFADTGWEPPEVYAHLARLDE EVLAPAGIALVRVRAGSIYDEALDPHFPRSLPLYTRDPKTGEPGGITSRACTTNFKMIAIYRWLREQLGAKVSEGSCTFC SGEGQRNAPWLVKYGHEKPWGICSVCRGTGTVRKVGAPPQGVWARSYVGFSADEMGRISPSRVSYAFDTFPLVGRDQNGE VVPPDLSMSRHDCGEYNTRHGFPEVMKSACIGCPWHSDAEWIRIKQDERQWQQVVDLDRSIRNTPGLDNEAFLHKSRIPI EDVTFESADDVERPSCSPYGCRSGLDTDSVAPPSLFDDDWIDLEETA
Sequences:
>Translated_367_residues MSDLREGLLFPNLLTRSERRELDREPEPRFLYQSMGAGWQSTAIALLAAQGVIEKPRFAVFADTGWEPPEVYAHLARLDE EVLAPAGIALVRVRAGSIYDEALDPHFPRSLPLYTRDPKTGEPGGITSRACTTNFKMIAIYRWLREQLGAKVSEGSCTFC SGEGQRNAPWLVKYGHEKPWGICSVCRGTGTVRKVGAPPQGVWARSYVGFSADEMGRISPSRVSYAFDTFPLVGRDQNGE VVPPDLSMSRHDCGEYNTRHGFPEVMKSACIGCPWHSDAEWIRIKQDERQWQQVVDLDRSIRNTPGLDNEAFLHKSRIPI EDVTFESADDVERPSCSPYGCRSGLDTDSVAPPSLFDDDWIDLEETA >Mature_366_residues SDLREGLLFPNLLTRSERRELDREPEPRFLYQSMGAGWQSTAIALLAAQGVIEKPRFAVFADTGWEPPEVYAHLARLDEE VLAPAGIALVRVRAGSIYDEALDPHFPRSLPLYTRDPKTGEPGGITSRACTTNFKMIAIYRWLREQLGAKVSEGSCTFCS GEGQRNAPWLVKYGHEKPWGICSVCRGTGTVRKVGAPPQGVWARSYVGFSADEMGRISPSRVSYAFDTFPLVGRDQNGEV VPPDLSMSRHDCGEYNTRHGFPEVMKSACIGCPWHSDAEWIRIKQDERQWQQVVDLDRSIRNTPGLDNEAFLHKSRIPIE DVTFESADDVERPSCSPYGCRSGLDTDSVAPPSLFDDDWIDLEETA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41014; Mature: 40883
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLREGLLFPNLLTRSERRELDREPEPRFLYQSMGAGWQSTAIALLAAQGVIEKPRFAV CCHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEE FADTGWEPPEVYAHLARLDEEVLAPAGIALVRVRAGSIYDEALDPHFPRSLPLYTRDPKT EECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHCCCCCCCCCCCEECCCCC GEPGGITSRACTTNFKMIAIYRWLREQLGAKVSEGSCTFCSGEGQRNAPWLVKYGHEKPW CCCCCCCCCHHHCCCHHHHHHHHHHHHHCCEECCCCEEEECCCCCCCCCEEEEECCCCCC GICSVCRGTGTVRKVGAPPQGVWARSYVGFSADEMGRISPSRVSYAFDTFPLVGRDQNGE CHHHHHHCCCCEEECCCCCCCCHHHHHCCCCHHHHCCCCHHHHEEEECCCCCCCCCCCCC VVPPDLSMSRHDCGEYNTRHGFPEVMKSACIGCPWHSDAEWIRIKQDERQWQQVVDLDRS EECCCCCCCHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHH IRNTPGLDNEAFLHKSRIPIEDVTFESADDVERPSCSPYGCRSGLDTDSVAPPSLFDDDW HHCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC IDLEETA CCCCCCC >Mature Secondary Structure SDLREGLLFPNLLTRSERRELDREPEPRFLYQSMGAGWQSTAIALLAAQGVIEKPRFAV CHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEE FADTGWEPPEVYAHLARLDEEVLAPAGIALVRVRAGSIYDEALDPHFPRSLPLYTRDPKT EECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHCCCCCCCCCCCEECCCCC GEPGGITSRACTTNFKMIAIYRWLREQLGAKVSEGSCTFCSGEGQRNAPWLVKYGHEKPW CCCCCCCCCHHHCCCHHHHHHHHHHHHHCCEECCCCEEEECCCCCCCCCEEEEECCCCCC GICSVCRGTGTVRKVGAPPQGVWARSYVGFSADEMGRISPSRVSYAFDTFPLVGRDQNGE CHHHHHHCCCCEEECCCCCCCCHHHHHCCCCHHHHCCCCHHHHEEEECCCCCCCCCCCCC VVPPDLSMSRHDCGEYNTRHGFPEVMKSACIGCPWHSDAEWIRIKQDERQWQQVVDLDRS EECCCCCCCHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHH IRNTPGLDNEAFLHKSRIPIEDVTFESADDVERPSCSPYGCRSGLDTDSVAPPSLFDDDW HHCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC IDLEETA CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA