Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_010397 |
Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169628825
Identifier: 169628825
GI number: 169628825
Start: 1762889
End: 1763236
Strand: Direct
Name: 169628825
Synonym: MAB_1735
Alternate gene names: NA
Gene position: 1762889-1763236 (Clockwise)
Preceding gene: 169628824
Following gene: 169628826
Centisome position: 34.79
GC content: 54.89
Gene sequence:
>348_bases ATGAACCCCAGTGGTTTCCATCTTCATTGTGATGGTGCATATCCGTTGCCGCCGTTGAAGATTTACGGGCCTAGAGCTGC TGGAACTCGCAACGTTCTTGACTGCATCGCAGAGATGGATTTGGAGGACATCGAGGAGATGTTGGCCTCTGTCCGTAGCC AACTACCCAACCCGGAGTCGGTGTTGTGGCGGTACGACAAGTGCGAGTTGGAGACCTACACGGCGCTAAGCGCTGAACTC AAGGTCAACCCACGGGCATTGAATGCCGAACTCAAGCACGGATGCGAATTCAACTGGGACTCAGATGGCCCCGAGTATTC CGAAGATGAAGAAGGGGAGGCGGCGTGA
Upstream 100 bases:
>100_bases TAGCGGGACAAGTGTTGGCATACAGCGCCATCTGGTTTTGCCCCACGCACATCACTCTCTTGAAGCGGTTCGCCGACTAC TACAAGGGAGGGCGAGAAGC
Downstream 100 bases:
>100_bases TGTTCGCCCTACTCATAGCTGTATGCGCGATCGTCTTCCTTGCAGTCATTCTCGGCGGGCTTGGGCTTGGCGGGTGGGCG ATGTGGGAGTGCTGGAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MNPSGFHLHCDGAYPLPPLKIYGPRAAGTRNVLDCIAEMDLEDIEEMLASVRSQLPNPESVLWRYDKCELETYTALSAEL KVNPRALNAELKHGCEFNWDSDGPEYSEDEEGEAA
Sequences:
>Translated_115_residues MNPSGFHLHCDGAYPLPPLKIYGPRAAGTRNVLDCIAEMDLEDIEEMLASVRSQLPNPESVLWRYDKCELETYTALSAEL KVNPRALNAELKHGCEFNWDSDGPEYSEDEEGEAA >Mature_115_residues MNPSGFHLHCDGAYPLPPLKIYGPRAAGTRNVLDCIAEMDLEDIEEMLASVRSQLPNPESVLWRYDKCELETYTALSAEL KVNPRALNAELKHGCEFNWDSDGPEYSEDEEGEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12857; Mature: 12857
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPSGFHLHCDGAYPLPPLKIYGPRAAGTRNVLDCIAEMDLEDIEEMLASVRSQLPNPES CCCCCCEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHH VLWRYDKCELETYTALSAELKVNPRALNAELKHGCEFNWDSDGPEYSEDEEGEAA HEEECCCCCCEEEEEEEEEEEECCHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNPSGFHLHCDGAYPLPPLKIYGPRAAGTRNVLDCIAEMDLEDIEEMLASVRSQLPNPES CCCCCCEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHH VLWRYDKCELETYTALSAELKVNPRALNAELKHGCEFNWDSDGPEYSEDEEGEAA HEEECCCCCCEEEEEEEEEEEECCHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA