Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169628788
Identifier: 169628788
GI number: 169628788
Start: 1724508
End: 1725617
Strand: Direct
Name: 169628788
Synonym: MAB_1698
Alternate gene names: NA
Gene position: 1724508-1725617 (Clockwise)
Preceding gene: 169628787
Following gene: 169628789
Centisome position: 34.03
GC content: 65.77
Gene sequence:
>1110_bases GTGACCACGATTCGTAAGATGCTCCTGATATGTCTGGGGCTGGCCCTGGCCGCGACGACGGCGGGCGCGGCATGGTCCGT CACCCGGGACCGTGGAACCATCACCGTCACGGCCCAATTCGACAGCGCCGCGGGCCTGTATCCGGGAAATGTGGTGGCAG TCCTCGGCATGCCGGTGGGGCAGGTCTCTAAGATCACCGCCCGGGGCGGCTACGCCGAGGTGGAGTTCACGGTGGACAGC CAGGTGAAGGTGCCCGCCGACGCCCAGGCCGTCACGCTCTCGACGTCGATCCTGACCGACCGCCAGATCGAGCTGTCCCC GCCGTATCGCGGCGGACCTGAACTGCGTGACGGCGACACCATCGGCCTGAGCCGCACACGGACGCCCGTCGAATTCGACC GGGTGCTGGGCATGCTCGACAAACTCTCCGGGTCCCTGCGCGGTGACGGTGCCGGTGGTGGGCCCATTGCCGCGGTGCTC AACGCGGGCGACGGTGTGGCCGCGGGCAATGGTGATCGCATCAAGACGGCGCTGGACGAGTTGTCGCGGGCCTTGCGGCT GGGCGCCGACGGTGGGGCGCACACCCGCGAACAGATGACGGCCATCGTCAAGAACGTCAGTGGCCTACTGGACGCGGCGG CCCGCAATGACGCGAGCCTGCGTCAGTTCGGTTCGACGGTACGACAGCTCAGCGATGTGCTGGCCGATGAGAATTTCGGG TCGGGCAACACCGGGCGGCAGTTCAACGAGGTGATCGAGCAGACGGGGAATATCTTGCAGGCCAACCGGGATGCGATCCG GCGTGGTATTGCCAACGGCAACAAGAGCATCCAGACGGTGTATGACCGCCAGCGGGAGGTCGCCGAGTTCTTCGATGTGT TGCCGCTGATGGCCGACAACCTGTACAACGCCATCGACCAGCGCAACGGCGCCATCCGGGCGCACTTCCTGGCCGACCGC ATGGTGTTCGACGGCCAGATGGCCAAGGAGATCTGCAATCTGATGGGCTTGCGACAACTCGGCTGTAGCACCGGGACACT GCAGGATTACGGCCCCGATTTCGGGCTGACCTACATGCTCGACGGTCTTGCGGCGATGGGGCAGAAGTGA
Upstream 100 bases:
>100_bases AGGGTAACCCCGGCGGCGGCGCGCTCATCGACTCGTGGATGTGTGCGATCAGTGGCCGGGCCAAGCAATTTGGGATGATC GAGTACTTCAAGGACTGCCA
Downstream 100 bases:
>100_bases TGGGCCGCGGATTGCCGGTGTTTCTCGCCGTCGTGCTGCTGAGCGCCGGATGTTCCACCGGCGGGCTGGCCGACCTGCCG CTGCCAGCCCCGGGTCTGGG
Product: putative Mce family protein
Products: NA
Alternate protein names: Mce Family Protein; MCE-Family D; Secreted Protein; MCE Family Protein; Mce Family D; MCE-Family Protein; Mammalian Cell Entry Related Domain Protein; Virulence Factor MCE-Like Protein; Mce-Related Protein; MCE-Family
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MTTIRKMLLICLGLALAATTAGAAWSVTRDRGTITVTAQFDSAAGLYPGNVVAVLGMPVGQVSKITARGGYAEVEFTVDS QVKVPADAQAVTLSTSILTDRQIELSPPYRGGPELRDGDTIGLSRTRTPVEFDRVLGMLDKLSGSLRGDGAGGGPIAAVL NAGDGVAAGNGDRIKTALDELSRALRLGADGGAHTREQMTAIVKNVSGLLDAAARNDASLRQFGSTVRQLSDVLADENFG SGNTGRQFNEVIEQTGNILQANRDAIRRGIANGNKSIQTVYDRQREVAEFFDVLPLMADNLYNAIDQRNGAIRAHFLADR MVFDGQMAKEICNLMGLRQLGCSTGTLQDYGPDFGLTYMLDGLAAMGQK
Sequences:
>Translated_369_residues MTTIRKMLLICLGLALAATTAGAAWSVTRDRGTITVTAQFDSAAGLYPGNVVAVLGMPVGQVSKITARGGYAEVEFTVDS QVKVPADAQAVTLSTSILTDRQIELSPPYRGGPELRDGDTIGLSRTRTPVEFDRVLGMLDKLSGSLRGDGAGGGPIAAVL NAGDGVAAGNGDRIKTALDELSRALRLGADGGAHTREQMTAIVKNVSGLLDAAARNDASLRQFGSTVRQLSDVLADENFG SGNTGRQFNEVIEQTGNILQANRDAIRRGIANGNKSIQTVYDRQREVAEFFDVLPLMADNLYNAIDQRNGAIRAHFLADR MVFDGQMAKEICNLMGLRQLGCSTGTLQDYGPDFGLTYMLDGLAAMGQK >Mature_368_residues TTIRKMLLICLGLALAATTAGAAWSVTRDRGTITVTAQFDSAAGLYPGNVVAVLGMPVGQVSKITARGGYAEVEFTVDSQ VKVPADAQAVTLSTSILTDRQIELSPPYRGGPELRDGDTIGLSRTRTPVEFDRVLGMLDKLSGSLRGDGAGGGPIAAVLN AGDGVAAGNGDRIKTALDELSRALRLGADGGAHTREQMTAIVKNVSGLLDAAARNDASLRQFGSTVRQLSDVLADENFGS GNTGRQFNEVIEQTGNILQANRDAIRRGIANGNKSIQTVYDRQREVAEFFDVLPLMADNLYNAIDQRNGAIRAHFLADRM VFDGQMAKEICNLMGLRQLGCSTGTLQDYGPDFGLTYMLDGLAAMGQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39102; Mature: 38971
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIRKMLLICLGLALAATTAGAAWSVTRDRGTITVTAQFDSAAGLYPGNVVAVLGMPVG CCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEECCCCCCCCCCEEEEECCCCC QVSKITARGGYAEVEFTVDSQVKVPADAQAVTLSTSILTDRQIELSPPYRGGPELRDGDT HHHHEEECCCEEEEEEEECCCEECCCCCCEEEEEHHHHCCCEEEECCCCCCCCCCCCCCC IGLSRTRTPVEFDRVLGMLDKLSGSLRGDGAGGGPIAAVLNAGDGVAAGNGDRIKTALDE CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHH LSRALRLGADGGAHTREQMTAIVKNVSGLLDAAARNDASLRQFGSTVRQLSDVLADENFG HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC SGNTGRQFNEVIEQTGNILQANRDAIRRGIANGNKSIQTVYDRQREVAEFFDVLPLMADN CCCCCHHHHHHHHHCCCHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LYNAIDQRNGAIRAHFLADRMVFDGQMAKEICNLMGLRQLGCSTGTLQDYGPDFGLTYML HHHHHHHCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHH DGLAAMGQK HHHHHHCCC >Mature Secondary Structure TTIRKMLLICLGLALAATTAGAAWSVTRDRGTITVTAQFDSAAGLYPGNVVAVLGMPVG CHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEECCCCCCCCCCEEEEECCCCC QVSKITARGGYAEVEFTVDSQVKVPADAQAVTLSTSILTDRQIELSPPYRGGPELRDGDT HHHHEEECCCEEEEEEEECCCEECCCCCCEEEEEHHHHCCCEEEECCCCCCCCCCCCCCC IGLSRTRTPVEFDRVLGMLDKLSGSLRGDGAGGGPIAAVLNAGDGVAAGNGDRIKTALDE CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHH LSRALRLGADGGAHTREQMTAIVKNVSGLLDAAARNDASLRQFGSTVRQLSDVLADENFG HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC SGNTGRQFNEVIEQTGNILQANRDAIRRGIANGNKSIQTVYDRQREVAEFFDVLPLMADN CCCCCHHHHHHHHHCCCHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LYNAIDQRNGAIRAHFLADRMVFDGQMAKEICNLMGLRQLGCSTGTLQDYGPDFGLTYML HHHHHHHCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHH DGLAAMGQK HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA