Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169628780
Identifier: 169628780
GI number: 169628780
Start: 1716451
End: 1717221
Strand: Direct
Name: 169628780
Synonym: MAB_1690
Alternate gene names: NA
Gene position: 1716451-1717221 (Clockwise)
Preceding gene: 169628779
Following gene: 169628781
Centisome position: 33.87
GC content: 62.39
Gene sequence:
>771_bases GTGACCGCACTGTCGAACACCGCGCGGCTGTTCCGCCGGTACGTCGTGGTCGGATTGCGGCAACCGGTATTCGGATTTAT CTTCCCGATCGTCTTTCCGGTGGTCCTGGTGATCTTCGTGCGGTCCATGTTCCAACGGGTCGCCGACCTGCCCGGATTCC CGCTGTCTTCCTATACGGCATACATCGCACCCGGGCTCATCATGCTCATCCCGATGCTCGGTGCCGGGTATGGCGCCGGG ACACTCATCGACGAGATCCGGTCGGGGTTCACCGATCGGCTGCGGCTCTACGGGGTATCCACCGGACAGATCATGGCGGC CAAGATCGGCTTCGAGATGTTCCGCATCTTGCCGGCCGCGGTGATCGTCATCGGGCTGCTGGCCTTCCTGGACGCACCGC TGCGGTCGGGTCTGCTCACCGGGGTCTTTCTGGTGCTGGTCATGTTCCTGTGGTCGGCGGCCTACAGCTCACTGTTCTAC CTGGTGGCGTTGCGCACCCTCAATCCGCAAGCGCCGGTGGCGATGCTGCCGCTGGCCCTTCCGGTGCTCTTCGTCAGTCA GGCGCTGATGCCGTCGGTCTTCCTGTCCGACTGGCTCCGGATCAGCATCAACGCGAATCCCTTCTCTCACATCGTGTCCG CGGCCTCCACGATCATGTATGGCGACTTCGACGCGATGCTGGTAGTCAAGGGCGTCCTGGTGGCCATCGGGATGTTCGCG CTGCTGCAAATTCCCATCCATCTGGTGATCCGCCGGAAAATTGGCAAGTAG
Upstream 100 bases:
>100_bases TGGGCGCGTTGAGCGCCGAGCTCGACCGCGTGGGCCTGGGGGCGGCCAGCATCGAGGTGCGTTCCACCTCGCTGCGCGAC GCATTCCTGGAGGTGACCCA
Downstream 100 bases:
>100_bases AAGGCATAGAGAAAAATATGGAAACCCCATCACAACCTGATGTTCTTCACGCAAGCGGCTCATCACACGTCCGCGAGTTT CTCATCGAATTCATCGCCGA
Product: ABC transporter transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MTALSNTARLFRRYVVVGLRQPVFGFIFPIVFPVVLVIFVRSMFQRVADLPGFPLSSYTAYIAPGLIMLIPMLGAGYGAG TLIDEIRSGFTDRLRLYGVSTGQIMAAKIGFEMFRILPAAVIVIGLLAFLDAPLRSGLLTGVFLVLVMFLWSAAYSSLFY LVALRTLNPQAPVAMLPLALPVLFVSQALMPSVFLSDWLRISINANPFSHIVSAASTIMYGDFDAMLVVKGVLVAIGMFA LLQIPIHLVIRRKIGK
Sequences:
>Translated_256_residues MTALSNTARLFRRYVVVGLRQPVFGFIFPIVFPVVLVIFVRSMFQRVADLPGFPLSSYTAYIAPGLIMLIPMLGAGYGAG TLIDEIRSGFTDRLRLYGVSTGQIMAAKIGFEMFRILPAAVIVIGLLAFLDAPLRSGLLTGVFLVLVMFLWSAAYSSLFY LVALRTLNPQAPVAMLPLALPVLFVSQALMPSVFLSDWLRISINANPFSHIVSAASTIMYGDFDAMLVVKGVLVAIGMFA LLQIPIHLVIRRKIGK >Mature_255_residues TALSNTARLFRRYVVVGLRQPVFGFIFPIVFPVVLVIFVRSMFQRVADLPGFPLSSYTAYIAPGLIMLIPMLGAGYGAGT LIDEIRSGFTDRLRLYGVSTGQIMAAKIGFEMFRILPAAVIVIGLLAFLDAPLRSGLLTGVFLVLVMFLWSAAYSSLFYL VALRTLNPQAPVAMLPLALPVLFVSQALMPSVFLSDWLRISINANPFSHIVSAASTIMYGDFDAMLVVKGVLVAIGMFAL LQIPIHLVIRRKIGK
Specific function: Unknown
COG id: COG0842
COG function: function code V; ABC-type multidrug transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27975; Mature: 27844
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: PS51012 ABC_TM2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALSNTARLFRRYVVVGLRQPVFGFIFPIVFPVVLVIFVRSMFQRVADLPGFPLSSYTA CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH YIAPGLIMLIPMLGAGYGAGTLIDEIRSGFTDRLRLYGVSTGQIMAAKIGFEMFRILPAA HHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHEECCCCHHHHHHHHHHHHHHHHHH VIVIGLLAFLDAPLRSGLLTGVFLVLVMFLWSAAYSSLFYLVALRTLNPQAPVAMLPLAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH PVLFVSQALMPSVFLSDWLRISINANPFSHIVSAASTIMYGDFDAMLVVKGVLVAIGMFA HHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LLQIPIHLVIRRKIGK HHHHHHHHHHHHHHCC >Mature Secondary Structure TALSNTARLFRRYVVVGLRQPVFGFIFPIVFPVVLVIFVRSMFQRVADLPGFPLSSYTA CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH YIAPGLIMLIPMLGAGYGAGTLIDEIRSGFTDRLRLYGVSTGQIMAAKIGFEMFRILPAA HHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHEECCCCHHHHHHHHHHHHHHHHHH VIVIGLLAFLDAPLRSGLLTGVFLVLVMFLWSAAYSSLFYLVALRTLNPQAPVAMLPLAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH PVLFVSQALMPSVFLSDWLRISINANPFSHIVSAASTIMYGDFDAMLVVKGVLVAIGMFA HHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LLQIPIHLVIRRKIGK HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA