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The map label for this gene is ybeY [C]

Identifier: 169628759

GI number: 169628759

Start: 1697404

End: 1697916

Strand: Direct

Name: ybeY [C]

Synonym: MAB_1669

Alternate gene names: 169628759

Gene position: 1697404-1697916 (Clockwise)

Preceding gene: 169628758

Following gene: 169628760

Centisome position: 33.5

GC content: 65.89

Gene sequence:

>513_bases
ATGAGCATTGAGGTAGTCAACGAGTCGGGTATCGACGTTGCCGAGGGCGAGTTGGTCAGCGTCGCACGGTTCGCCATCGC
GGCCATGGACGTGCATCCGGCGGCCGAGCTGTCGATGATGCTCGTCGACCTGGCGGCGATGGCCGACCTGCACATGCGGT
GGATGGATCTGCCCGGTCCCACCGATGTGATGTCGTTCCCGATGGACGAGTTGGAGCCCGGCGGGCGTCCCGACGCGCCC
GAGCCGGGGCCGTCGATGCTCGGCGACATCGTGCTGTGCCCGCAGTTCGCGGCCGAACAGGCCGAGGCGGCCGGGCATTC
GCTGGCGCATGAGCTGGCACTGCTGACGGTGCACGGTGTGCTGCATCTACTCGGTTACGACCACGCCGAGCCCGAGGAAG
AGCGCGAGATGTTCGCGCTGCAGAACCAGCTGCTGCAGGACTGGTACGAGCAGCAGGCGCAGCTGTACCGAGATAGCCGT
CTGCTCGACAAATCGCGCAACTTCGACGAGTGA

Upstream 100 bases:

>100_bases
TGGTATCGGAGATCGTGGATGCCTACGCGCGTTTCGAGGACTCAGATTTGACGGGTAATCGCGCGCAGCGGCGCGCGTCG
GGAAATCGGAGCCGGCACCG

Downstream 100 bases:

>100_bases
TGAGCGTCTTGCGCGAAGAACGTTGGTTTTGAGTATGAGCAGCATCGGGCTGCTGCTGGCGGCGATTGCGCTGGTTGGTC
TGGGGGGTGCCTTCGCGGCC

Product: putative metalloprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MSIEVVNESGIDVAEGELVSVARFAIAAMDVHPAAELSMMLVDLAAMADLHMRWMDLPGPTDVMSFPMDELEPGGRPDAP
EPGPSMLGDIVLCPQFAAEQAEAAGHSLAHELALLTVHGVLHLLGYDHAEPEEEREMFALQNQLLQDWYEQQAQLYRDSR
LLDKSRNFDE

Sequences:

>Translated_170_residues
MSIEVVNESGIDVAEGELVSVARFAIAAMDVHPAAELSMMLVDLAAMADLHMRWMDLPGPTDVMSFPMDELEPGGRPDAP
EPGPSMLGDIVLCPQFAAEQAEAAGHSLAHELALLTVHGVLHLLGYDHAEPEEEREMFALQNQLLQDWYEQQAQLYRDSR
LLDKSRNFDE
>Mature_169_residues
SIEVVNESGIDVAEGELVSVARFAIAAMDVHPAAELSMMLVDLAAMADLHMRWMDLPGPTDVMSFPMDELEPGGRPDAPE
PGPSMLGDIVLCPQFAAEQAEAAGHSLAHELALLTVHGVLHLLGYDHAEPEEEREMFALQNQLLQDWYEQQAQLYRDSRL
LDKSRNFDE

Specific function: Involved in rRNA and/or ribosome maturation and assembly. Required for normal 5' and 3' processing of 16S, 23S and 5S rRNAs. May have metal-dependent hydrolase activity

COG id: COG0319

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rRNA maturation factor YbeY family

Homologues:

Organism=Escherichia coli, GI1786880, Length=94, Percent_Identity=38.2978723404255, Blast_Score=64, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RRMF_MYCA9 (B1MN42)

Other databases:

- EMBL:   CU458896
- RefSeq:   YP_001702408.1
- ProteinModelPortal:   B1MN42
- SMR:   B1MN42
- EnsemblBacteria:   EBMYCT00000004721
- GeneID:   5964186
- GenomeReviews:   CU458896_GR
- KEGG:   mab:MAB_1669
- GeneTree:   EBGT00050000016997
- HOGENOM:   HBG734136
- OMA:   MDVHPAA
- ProtClustDB:   PRK00016
- BioCyc:   MABS561007:MAB_1669-MONOMER
- HAMAP:   MF_00009
- InterPro:   IPR023091
- InterPro:   IPR020549
- InterPro:   IPR002036
- Gene3D:   G3DSA:3.40.390.30
- TIGRFAMs:   TIGR00043

Pfam domain/function: PF02130 UPF0054

EC number: NA

Molecular weight: Translated: 18796; Mature: 18665

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: PS01306 UPF0054

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIEVVNESGIDVAEGELVSVARFAIAAMDVHPAAELSMMLVDLAAMADLHMRWMDLPGP
CCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
TDVMSFPMDELEPGGRPDAPEPGPSMLGDIVLCPQFAAEQAEAAGHSLAHELALLTVHGV
HHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LHLLGYDHAEPEEEREMFALQNQLLQDWYEQQAQLYRDSRLLDKSRNFDE
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SIEVVNESGIDVAEGELVSVARFAIAAMDVHPAAELSMMLVDLAAMADLHMRWMDLPGP
CEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
TDVMSFPMDELEPGGRPDAPEPGPSMLGDIVLCPQFAAEQAEAAGHSLAHELALLTVHGV
HHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LHLLGYDHAEPEEEREMFALQNQLLQDWYEQQAQLYRDSRLLDKSRNFDE
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA