Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is sbpA [H]
Identifier: 169628742
GI number: 169628742
Start: 1681534
End: 1682592
Strand: Direct
Name: sbpA [H]
Synonym: MAB_1652
Alternate gene names: 169628742
Gene position: 1681534-1682592 (Clockwise)
Preceding gene: 169628741
Following gene: 169628743
Centisome position: 33.18
GC content: 62.98
Gene sequence:
>1059_bases TTGATCCCCAGTAGATCGTCAGCGCGCGGTTCCCATCGCTCGTCGCCCAAGGGACTCATCGCCGGCGCGCTCGTCGTCGC CGCCGCCTTGACCGCCGCATGCCAGGGCGGGCCGAGCGATGTTCCCGGCGGGGGTCGAGGCGGAGATGCCGACACCACGC TCACCCTGGTGGCCTATGCGGTTCCCGAGCCGGGCTTCCGCGAGATCATTCCGGCCTTCAACGCCACCGAGGCCGGTAAG GGCATCCAGATCACCCAGTCCTACGGTGCCTCCGGGGACCAGTCTCGTGGGGTCGAGGGCGGCAAGCCCGCCGACATCGT GAACTTCTCGGTGGAGCCGGACATCACCCGGCTGGTCAAGGCCAAGAAGGTTTCCGCGGACTGGGATAAGGACGCATTCG GCGGTATCCCGTTTGGGTCGGTGGTGACTTTGGTTGTGCGCAAGGGCAATCCGAAGCACGTCAAGGACTGGGACGATCTG CTGCAGCCCGGCCTCGAGGTCATCAGCCCCAGCCCGCTGAGTTCCGGTTCGGCCAAGTGGAACCTGCTGGCTCCGTATGC CGCGAAGAGCGAAGGCGGCAAGAACCCGCAAGCCGGACTGGATTTCGTCTCCAAGCTGGTGCGTGAGCATGTCAAGATGC GACCGGGTTCGGGACGTGAAGCGACCGAGGTCTTTGTGCAGGGCAGCGGTGATGTCCTGATCAGCTACGAGAACGAGGCC ATCTTCACCGAGAGCCTCGGCAAGCCGATCGAGCATGTCAATGTGCCGATCACCTTCAAGATCGAGAACCCGGTGGCGGT GGTGTCCGAGAGCTTGCATGTCAAGAAGGCCACCGAGTTCAAGAATTTCCTGTACACCCCCGAGGCGCAGCGTATCTGGG CCAAGACGGGCTTCCGGCCCGTGGACCCCGGGGTGGCCGCGGAATTCGCATCCTCCTTCCCGGTGCCGTCGAAGTTGTGG ACCATCAAGGATTTGGGCGGATGGAAGAGCGTCGACAAGGAATTGTTCGACAAAAACGACGGATCCATCACCAAGATCTA CAAAGAGGCGACCGGATGA
Upstream 100 bases:
>100_bases GTCCATCCGACCCTCTCGCTGAGCTGACGTCCGCACTCCGTGGCCGGGCCCGAGATTCCTTTTGGTTCTCCTTCTCATCC CAGCCACGGAAAGGGTTGTC
Downstream 100 bases:
>100_bases GTACCGTGATCGAAAATCCCACCTCACAGGACAATCCGGAGGACAAGGTGCCACCGACGGGAGAGTCCGGCACGGCCGTG GGCCGTTCGCGTAAGCGCTT
Product: sulfate ABC transporter, sulfate-binding protein SubI
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MIPSRSSARGSHRSSPKGLIAGALVVAAALTAACQGGPSDVPGGGRGGDADTTLTLVAYAVPEPGFREIIPAFNATEAGK GIQITQSYGASGDQSRGVEGGKPADIVNFSVEPDITRLVKAKKVSADWDKDAFGGIPFGSVVTLVVRKGNPKHVKDWDDL LQPGLEVISPSPLSSGSAKWNLLAPYAAKSEGGKNPQAGLDFVSKLVREHVKMRPGSGREATEVFVQGSGDVLISYENEA IFTESLGKPIEHVNVPITFKIENPVAVVSESLHVKKATEFKNFLYTPEAQRIWAKTGFRPVDPGVAAEFASSFPVPSKLW TIKDLGGWKSVDKELFDKNDGSITKIYKEATG
Sequences:
>Translated_352_residues MIPSRSSARGSHRSSPKGLIAGALVVAAALTAACQGGPSDVPGGGRGGDADTTLTLVAYAVPEPGFREIIPAFNATEAGK GIQITQSYGASGDQSRGVEGGKPADIVNFSVEPDITRLVKAKKVSADWDKDAFGGIPFGSVVTLVVRKGNPKHVKDWDDL LQPGLEVISPSPLSSGSAKWNLLAPYAAKSEGGKNPQAGLDFVSKLVREHVKMRPGSGREATEVFVQGSGDVLISYENEA IFTESLGKPIEHVNVPITFKIENPVAVVSESLHVKKATEFKNFLYTPEAQRIWAKTGFRPVDPGVAAEFASSFPVPSKLW TIKDLGGWKSVDKELFDKNDGSITKIYKEATG >Mature_352_residues MIPSRSSARGSHRSSPKGLIAGALVVAAALTAACQGGPSDVPGGGRGGDADTTLTLVAYAVPEPGFREIIPAFNATEAGK GIQITQSYGASGDQSRGVEGGKPADIVNFSVEPDITRLVKAKKVSADWDKDAFGGIPFGSVVTLVVRKGNPKHVKDWDDL LQPGLEVISPSPLSSGSAKWNLLAPYAAKSEGGKNPQAGLDFVSKLVREHVKMRPGSGREATEVFVQGSGDVLISYENEA IFTESLGKPIEHVNVPITFKIENPVAVVSESLHVKKATEFKNFLYTPEAQRIWAKTGFRPVDPGVAAEFASSFPVPSKLW TIKDLGGWKSVDKELFDKNDGSITKIYKEATG
Specific function: This protein specifically binds sulfate and is involved in its transmembrane transport [H]
COG id: COG1613
COG function: function code P; ABC-type sulfate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic sulfate-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1790351, Length=311, Percent_Identity=35.3697749196142, Blast_Score=167, Evalue=1e-42, Organism=Escherichia coli, GI1788765, Length=301, Percent_Identity=31.8936877076412, Blast_Score=121, Evalue=9e-29,
Paralogues:
None
Copy number: 1240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR000957 - InterPro: IPR006311 - InterPro: IPR005669 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 37299; Mature: 37299
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPSRSSARGSHRSSPKGLIAGALVVAAALTAACQGGPSDVPGGGRGGDADTTLTLVAYA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEE VPEPGFREIIPAFNATEAGKGIQITQSYGASGDQSRGVEGGKPADIVNFSVEPDITRLVK CCCCCHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHH AKKVSADWDKDAFGGIPFGSVVTLVVRKGNPKHVKDWDDLLQPGLEVISPSPLSSGSAKW HHHCCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCCHHHHHHCCHHHCCCCCCCCCCCCE NLLAPYAAKSEGGKNPQAGLDFVSKLVREHVKMRPGSGREATEVFVQGSGDVLISYENEA EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCCE IFTESLGKPIEHVNVPITFKIENPVAVVSESLHVKKATEFKNFLYTPEAQRIWAKTGFRP EEHHHHCCCHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEE VDPGVAAEFASSFPVPSKLWTIKDLGGWKSVDKELFDKNDGSITKIYKEATG CCCCHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCEEHHHHCCC >Mature Secondary Structure MIPSRSSARGSHRSSPKGLIAGALVVAAALTAACQGGPSDVPGGGRGGDADTTLTLVAYA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEE VPEPGFREIIPAFNATEAGKGIQITQSYGASGDQSRGVEGGKPADIVNFSVEPDITRLVK CCCCCHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHH AKKVSADWDKDAFGGIPFGSVVTLVVRKGNPKHVKDWDDLLQPGLEVISPSPLSSGSAKW HHHCCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCCHHHHHHCCHHHCCCCCCCCCCCCE NLLAPYAAKSEGGKNPQAGLDFVSKLVREHVKMRPGSGREATEVFVQGSGDVLISYENEA EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCCE IFTESLGKPIEHVNVPITFKIENPVAVVSESLHVKKATEFKNFLYTPEAQRIWAKTGFRP EEHHHHCCCHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEE VDPGVAAEFASSFPVPSKLWTIKDLGGWKSVDKELFDKNDGSITKIYKEATG CCCCHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1708375 [H]