Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169628734
Identifier: 169628734
GI number: 169628734
Start: 1674357
End: 1675157
Strand: Direct
Name: 169628734
Synonym: MAB_1644
Alternate gene names: NA
Gene position: 1674357-1675157 (Clockwise)
Preceding gene: 169628733
Following gene: 169628735
Centisome position: 33.04
GC content: 67.04
Gene sequence:
>801_bases ATGACGGTCCGGAGCGGTGCCGCCGCCGTCGCGGTGGTGATGTGTGTGATCGTGGGCGGCTGCGGCCGCACCGACGATCA GGCGCAGCATACGACCGCGGCGTCCGGTTCCTCTTCGGGGGCAACGCCGCCGGGTTCGTCGACAAACTCCGCCCCGGCCG GGCCGGCACCGGGTACCGCGCCGCCTGCCTTCGGGTACACCCCCGAATTGGTGGCGGCGAAGGGGGCGGACGGGACGGTC ACCTATGACGTGCATCTGCCTCAACTGTCCGGCGGCGTGGATGCCGTACGCGATCGGTTCAACGACGGCACCCGCGCCGC GTTGCGGGATCTGATCGAGAACCTGCCCGGACCGAGCAGGGACCTGACGGTGTCCATCAACGACGGGGACGTGGGGCCCG GCCCCGAGACCACGCGCGTCGCCCTCATCGGGCCGCATGTGGTGGCAGGCATCCAGGTATACCTCTGGTACGCGGGCGGT GCCGCTCATCCCAATGTGTCGGTTTCGACGACGGTGGTCAACGGCGATACCGCGCAACCCATCACCTATGACGATCTGTT CCCCAACCAATACGCGGCGATGGCACGGTTACGGGAGGTGTTGCCCGGTCTGGATCCGACCGGGCGGGTGCGCCCGGACA GCATCAATGTGCGACTCGAGCAATGGCTACCCGCACCGACCGGCCTGCGGTTCTATGTTCCGGTCTCACATGCCGCCGGC GATTTTGTTCCGATCACCGTGCCATGGGAGAAGATTACTGATCTGGTCGATCCCACGGTCGTGCCGGTGCTGCGTCAGTA A
Upstream 100 bases:
>100_bases CGTTCACCCATCTGGCGTTGATCAATGCAGTCGTCCACGTCATCCGGGCCGAAGAGGAGGCAGACGTGAGCGGAACATTC CAACCCGCCAACGCGCCGAC
Downstream 100 bases:
>100_bases TGGGGGTAATCGCTTGTGAAGATCGGTCTCGTCTCGGCGCTTTTAGTGACGTGTGAGCTTGTCGCCGGGTGTCTGGAGCC GCCGCCGCAACCCGCTCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MTVRSGAAAVAVVMCVIVGGCGRTDDQAQHTTAASGSSSGATPPGSSTNSAPAGPAPGTAPPAFGYTPELVAAKGADGTV TYDVHLPQLSGGVDAVRDRFNDGTRAALRDLIENLPGPSRDLTVSINDGDVGPGPETTRVALIGPHVVAGIQVYLWYAGG AAHPNVSVSTTVVNGDTAQPITYDDLFPNQYAAMARLREVLPGLDPTGRVRPDSINVRLEQWLPAPTGLRFYVPVSHAAG DFVPITVPWEKITDLVDPTVVPVLRQ
Sequences:
>Translated_266_residues MTVRSGAAAVAVVMCVIVGGCGRTDDQAQHTTAASGSSSGATPPGSSTNSAPAGPAPGTAPPAFGYTPELVAAKGADGTV TYDVHLPQLSGGVDAVRDRFNDGTRAALRDLIENLPGPSRDLTVSINDGDVGPGPETTRVALIGPHVVAGIQVYLWYAGG AAHPNVSVSTTVVNGDTAQPITYDDLFPNQYAAMARLREVLPGLDPTGRVRPDSINVRLEQWLPAPTGLRFYVPVSHAAG DFVPITVPWEKITDLVDPTVVPVLRQ >Mature_265_residues TVRSGAAAVAVVMCVIVGGCGRTDDQAQHTTAASGSSSGATPPGSSTNSAPAGPAPGTAPPAFGYTPELVAAKGADGTVT YDVHLPQLSGGVDAVRDRFNDGTRAALRDLIENLPGPSRDLTVSINDGDVGPGPETTRVALIGPHVVAGIQVYLWYAGGA AHPNVSVSTTVVNGDTAQPITYDDLFPNQYAAMARLREVLPGLDPTGRVRPDSINVRLEQWLPAPTGLRFYVPVSHAAGD FVPITVPWEKITDLVDPTVVPVLRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27521; Mature: 27390
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVRSGAAAVAVVMCVIVGGCGRTDDQAQHTTAASGSSSGATPPGSSTNSAPAGPAPGTA CCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPAFGYTPELVAAKGADGTVTYDVHLPQLSGGVDAVRDRFNDGTRAALRDLIENLPGPSR CCCCCCCCHHEEECCCCCEEEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCC DLTVSINDGDVGPGPETTRVALIGPHVVAGIQVYLWYAGGAAHPNVSVSTTVVNGDTAQP EEEEEECCCCCCCCCCCCEEEEECCHHHEEEEEEEEEECCCCCCCCEEEEEEECCCCCCC ITYDDLFPNQYAAMARLREVLPGLDPTGRVRPDSINVRLEQWLPAPTGLRFYVPVSHAAG CCHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHCCCCCCCEEEEEECCCCC DFVPITVPWEKITDLVDPTVVPVLRQ CEEEEEECHHHHHHHHCCCHHHHCCC >Mature Secondary Structure TVRSGAAAVAVVMCVIVGGCGRTDDQAQHTTAASGSSSGATPPGSSTNSAPAGPAPGTA CCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPAFGYTPELVAAKGADGTVTYDVHLPQLSGGVDAVRDRFNDGTRAALRDLIENLPGPSR CCCCCCCCHHEEECCCCCEEEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCC DLTVSINDGDVGPGPETTRVALIGPHVVAGIQVYLWYAGGAAHPNVSVSTTVVNGDTAQP EEEEEECCCCCCCCCCCCEEEEECCHHHEEEEEEEEEECCCCCCCCEEEEEEECCCCCCC ITYDDLFPNQYAAMARLREVLPGLDPTGRVRPDSINVRLEQWLPAPTGLRFYVPVSHAAG CCHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHCCCCCCCEEEEEECCCCC DFVPITVPWEKITDLVDPTVVPVLRQ CEEEEEECHHHHHHHHCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA