Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_010397 |
Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169628726
Identifier: 169628726
GI number: 169628726
Start: 1665918
End: 1666895
Strand: Direct
Name: 169628726
Synonym: MAB_1636
Alternate gene names: NA
Gene position: 1665918-1666895 (Clockwise)
Preceding gene: 169628725
Following gene: 169628727
Centisome position: 32.88
GC content: 67.08
Gene sequence:
>978_bases ATGCTGGCCCGAAACGCGGAATCGCTGTACTGGATCGGTCGCTACGTCGAACGTGCCGATGACACCGCGCGCATCCTCGA TGTCACGGTGCATCAACTGCTGGAGGACGCGAGCGTGGACCCCGATCATGCTTCCCGGGTGCTGTTGCGGGTTCTGGGGA TCGAGGCGCCGGACACCGTGCTCGATGTGTGGTCGCTGACCGAGCTCGTCGCATTCAGCAGGGGAGTGCAGGGCGGTTCG ATCGTGGACTCGATCTCCGCGGCCCGTGAAAACGCGAGGGGCGCACGCGAAGTGACCTCCACGGAAATGTGGGAGTGCCT CAATACGACGTTCAATGCGCTGCCGGATCGCGAGCGTGCTGCTCGCCGGCTGGGCCCGCACGAGTTTTTCACCTACGTGG AGGGGCGTGCCGCGCAGTTCGCGGGGCTTGCCGATTCCACCCTCAGCCGCGATGACGGCTACCGGTTCCTGGTGCTCGGC AGGTCCATCGAGCGGGTGGACATGACGGTGCGGCTGCTGCTTTCACGTGTCGGTGACCGCGCCTCGTCACCGGCCTGGGT GACGCTGCTGCGCAGCGCGGGCGCGCACGACACCTACCTGCGCACGTATCGCGGCGTGCTGGACGCCAATCGGGTGGTGG AGTTCATGCTGCTGGACCGGTTGTTTCCGCGCTCGGTGTTCCACTCGTTGCGGCAGGCCGAACAGAGCCTGGACGAGCTG GATCACCGGCCGCACAGCCGGGTTGGGGCGCGCGCCGAGGCGCAGCGGCTGCTGGGCCGCGCCCGCAGCGAGTTGGAGTT CATGAGACCGGGTGTGCTGCTGGAGGATCTACCGACCCGGCTGGCCGGGTTGCAGCAGACGTGCCGCGAGCTCGGTGAAG CGGTGGCGCTGCAGTACTTCCACGCCGCACCGTGGGTGGCCTGGTCCGATGCCGGAGGAAGACACGACGTGGATCCCATC GAGGAGGGGGAAATCTGA
Upstream 100 bases:
>100_bases AGGCCGCCGAGGTCGAACAGGGGCCCGAGGTCGCCACGGCGGGGTTGCAGCAGCATCATGTGCAGCAACAACAGCAACAG CAACAGGGCCGGTGGCGCTG
Downstream 100 bases:
>100_bases TGTGGCGCCTGCGCATCATGCATGCCACCGGGTATGCGTACAAGACGCCGGTGACCGCCTCCTATAACGAGGCGCGGTTG ACGCCGCGCAGTGACGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MLARNAESLYWIGRYVERADDTARILDVTVHQLLEDASVDPDHASRVLLRVLGIEAPDTVLDVWSLTELVAFSRGVQGGS IVDSISAARENARGAREVTSTEMWECLNTTFNALPDRERAARRLGPHEFFTYVEGRAAQFAGLADSTLSRDDGYRFLVLG RSIERVDMTVRLLLSRVGDRASSPAWVTLLRSAGAHDTYLRTYRGVLDANRVVEFMLLDRLFPRSVFHSLRQAEQSLDEL DHRPHSRVGARAEAQRLLGRARSELEFMRPGVLLEDLPTRLAGLQQTCRELGEAVALQYFHAAPWVAWSDAGGRHDVDPI EEGEI
Sequences:
>Translated_325_residues MLARNAESLYWIGRYVERADDTARILDVTVHQLLEDASVDPDHASRVLLRVLGIEAPDTVLDVWSLTELVAFSRGVQGGS IVDSISAARENARGAREVTSTEMWECLNTTFNALPDRERAARRLGPHEFFTYVEGRAAQFAGLADSTLSRDDGYRFLVLG RSIERVDMTVRLLLSRVGDRASSPAWVTLLRSAGAHDTYLRTYRGVLDANRVVEFMLLDRLFPRSVFHSLRQAEQSLDEL DHRPHSRVGARAEAQRLLGRARSELEFMRPGVLLEDLPTRLAGLQQTCRELGEAVALQYFHAAPWVAWSDAGGRHDVDPI EEGEI >Mature_325_residues MLARNAESLYWIGRYVERADDTARILDVTVHQLLEDASVDPDHASRVLLRVLGIEAPDTVLDVWSLTELVAFSRGVQGGS IVDSISAARENARGAREVTSTEMWECLNTTFNALPDRERAARRLGPHEFFTYVEGRAAQFAGLADSTLSRDDGYRFLVLG RSIERVDMTVRLLLSRVGDRASSPAWVTLLRSAGAHDTYLRTYRGVLDANRVVEFMLLDRLFPRSVFHSLRQAEQSLDEL DHRPHSRVGARAEAQRLLGRARSELEFMRPGVLLEDLPTRLAGLQQTCRELGEAVALQYFHAAPWVAWSDAGGRHDVDPI EEGEI
Specific function: Unknown
COG id: COG2307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36435; Mature: 36435
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLARNAESLYWIGRYVERADDTARILDVTVHQLLEDASVDPDHASRVLLRVLGIEAPDTV CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHH LDVWSLTELVAFSRGVQGGSIVDSISAARENARGAREVTSTEMWECLNTTFNALPDRERA HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHH ARRLGPHEFFTYVEGRAAQFAGLADSTLSRDDGYRFLVLGRSIERVDMTVRLLLSRVGDR HHHCCHHHHHHHHCCHHHHHHCCHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCC ASSPAWVTLLRSAGAHDTYLRTYRGVLDANRVVEFMLLDRLFPRSVFHSLRQAEQSLDEL CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DHRPHSRVGARAEAQRLLGRARSELEFMRPGVLLEDLPTRLAGLQQTCRELGEAVALQYF HCCCCHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HAAPWVAWSDAGGRHDVDPIEEGEI HHCCCEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MLARNAESLYWIGRYVERADDTARILDVTVHQLLEDASVDPDHASRVLLRVLGIEAPDTV CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHH LDVWSLTELVAFSRGVQGGSIVDSISAARENARGAREVTSTEMWECLNTTFNALPDRERA HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHH ARRLGPHEFFTYVEGRAAQFAGLADSTLSRDDGYRFLVLGRSIERVDMTVRLLLSRVGDR HHHCCHHHHHHHHCCHHHHHHCCHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCC ASSPAWVTLLRSAGAHDTYLRTYRGVLDANRVVEFMLLDRLFPRSVFHSLRQAEQSLDEL CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DHRPHSRVGARAEAQRLLGRARSELEFMRPGVLLEDLPTRLAGLQQTCRELGEAVALQYF HCCCCHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HAAPWVAWSDAGGRHDVDPIEEGEI HHCCCEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA