Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169627444
Identifier: 169627444
GI number: 169627444
Start: 337477
End: 338391
Strand: Direct
Name: 169627444
Synonym: MAB_0340
Alternate gene names: NA
Gene position: 337477-338391 (Clockwise)
Preceding gene: 169627443
Following gene: 169627445
Centisome position: 6.66
GC content: 61.2
Gene sequence:
>915_bases GTGGTGCCGGCCTACGGTCAGAGCTTCACCGAGAAGCAAACCGCTCAGCTGGCCTATTTACGGGCGCTACGGCGGGTGGA TCCGTGTGGTCTTCTATTGATGCTCAAGGACATCGGTGCGCCCACATACATTTCCGGGGATGTGGGCGGCTGCTTCGGGT CCATCAAGGTCGCGGGTTCGGCGAACCCGTCGAGTGTGGGGCTGTCACTGATGTTGGGCGACTATTCGCGCGCGAAACCC GAATTCAGGGTCGGTGACGCGCCGGTCTATCACACAGCAGGCACGTGCGTGTTTGAGTTTCCGGTCGCGTTGGGCACGCT CCCGGACGCGCCAAAGTTGCCCAGGGCGGGCACACCGGCAGTGCGGGTTGTGGTCGTCGATGGTTCGCGAAGCGAGTTGG CGCCCAACTGCAAAATGGCACAACCTGTTATCGGTGTGCTGGCCACGATGAATCCGGCCGATATGCCCGTGCGTGACGCG CTGAGCGCATATCCGATCAAGATCGCCGAACGTGATCCGTGCGAAATTCTCGGTGAGTATCCGGGCCAGGTGAATGATGT GCGGCCCTCGCTCTTCGGCGATCCGTTCGCGTGCCGGTTTTCCTTACGGGACAACGATGCTCAATTCGAGCTGACTATCA GAACGGGTGTCGATCCGCCGTCGAGGGCGCGCGAAGAAATCCGGGACGGTGTCGAGTACTTTCACGGCCAGGACGGCAGG ATGTGCACCAGCATGGTGCGTCTTGGCAAGCCGCTCTACGCCCGTGATGTTCCGGGTGGCGCCATCCAGGAGACCAGCAC GCCCGAGCGCGTTTTCATCGAGGTGCTCAGCTTCTCGTTGAAGAACGGAGATTGCGGATCCACCCGGGAGATGATCGACA AGGCGGTGCGGATCTTCCGCGATTCATTCGACTGA
Upstream 100 bases:
>100_bases TGGCGCCGCTCTGCTGGGAATCGCGGGGTGCTCCACCATTGTTTCCGGCACCGCGACTGGACGCCTGCCCGCACCCACGG CAGAGAAGCTGTTCGAGGGG
Downstream 100 bases:
>100_bases AAGGAACTCTCTGATGCCATACGTCGAATCGGCGCAGCGCACCAAGGAGGCGGTCGCCGCCGCGCGGATCGTGTTGATGC GCGAGGGAGTGGGGCGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MVPAYGQSFTEKQTAQLAYLRALRRVDPCGLLLMLKDIGAPTYISGDVGGCFGSIKVAGSANPSSVGLSLMLGDYSRAKP EFRVGDAPVYHTAGTCVFEFPVALGTLPDAPKLPRAGTPAVRVVVVDGSRSELAPNCKMAQPVIGVLATMNPADMPVRDA LSAYPIKIAERDPCEILGEYPGQVNDVRPSLFGDPFACRFSLRDNDAQFELTIRTGVDPPSRAREEIRDGVEYFHGQDGR MCTSMVRLGKPLYARDVPGGAIQETSTPERVFIEVLSFSLKNGDCGSTREMIDKAVRIFRDSFD
Sequences:
>Translated_304_residues MVPAYGQSFTEKQTAQLAYLRALRRVDPCGLLLMLKDIGAPTYISGDVGGCFGSIKVAGSANPSSVGLSLMLGDYSRAKP EFRVGDAPVYHTAGTCVFEFPVALGTLPDAPKLPRAGTPAVRVVVVDGSRSELAPNCKMAQPVIGVLATMNPADMPVRDA LSAYPIKIAERDPCEILGEYPGQVNDVRPSLFGDPFACRFSLRDNDAQFELTIRTGVDPPSRAREEIRDGVEYFHGQDGR MCTSMVRLGKPLYARDVPGGAIQETSTPERVFIEVLSFSLKNGDCGSTREMIDKAVRIFRDSFD >Mature_304_residues MVPAYGQSFTEKQTAQLAYLRALRRVDPCGLLLMLKDIGAPTYISGDVGGCFGSIKVAGSANPSSVGLSLMLGDYSRAKP EFRVGDAPVYHTAGTCVFEFPVALGTLPDAPKLPRAGTPAVRVVVVDGSRSELAPNCKMAQPVIGVLATMNPADMPVRDA LSAYPIKIAERDPCEILGEYPGQVNDVRPSLFGDPFACRFSLRDNDAQFELTIRTGVDPPSRAREEIRDGVEYFHGQDGR MCTSMVRLGKPLYARDVPGGAIQETSTPERVFIEVLSFSLKNGDCGSTREMIDKAVRIFRDSFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32902; Mature: 32902
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPAYGQSFTEKQTAQLAYLRALRRVDPCGLLLMLKDIGAPTYISGDVGGCFGSIKVAGS CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHEEEEHHCCCCCEECCCCCCCEEEEEEECC ANPSSVGLSLMLGDYSRAKPEFRVGDAPVYHTAGTCVFEFPVALGTLPDAPKLPRAGTPA CCCHHCCEEEEECCCCCCCCCEECCCCCEEECCCCEEEECCHHHCCCCCCCCCCCCCCCE VRVVVVDGSRSELAPNCKMAQPVIGVLATMNPADMPVRDALSAYPIKIAERDPCEILGEY EEEEEEECCCHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCEEECCCCHHHHHHCC PGQVNDVRPSLFGDPFACRFSLRDNDAQFELTIRTGVDPPSRAREEIRDGVEYFHGQDGR CCCCCCCCHHHCCCCEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCH MCTSMVRLGKPLYARDVPGGAIQETSTPERVFIEVLSFSLKNGDCGSTREMIDKAVRIFR HHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH DSFD HCCC >Mature Secondary Structure MVPAYGQSFTEKQTAQLAYLRALRRVDPCGLLLMLKDIGAPTYISGDVGGCFGSIKVAGS CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHEEEEHHCCCCCEECCCCCCCEEEEEEECC ANPSSVGLSLMLGDYSRAKPEFRVGDAPVYHTAGTCVFEFPVALGTLPDAPKLPRAGTPA CCCHHCCEEEEECCCCCCCCCEECCCCCEEECCCCEEEECCHHHCCCCCCCCCCCCCCCE VRVVVVDGSRSELAPNCKMAQPVIGVLATMNPADMPVRDALSAYPIKIAERDPCEILGEY EEEEEEECCCHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCEEECCCCHHHHHHCC PGQVNDVRPSLFGDPFACRFSLRDNDAQFELTIRTGVDPPSRAREEIRDGVEYFHGQDGR CCCCCCCCHHHCCCCEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCH MCTSMVRLGKPLYARDVPGGAIQETSTPERVFIEVLSFSLKNGDCGSTREMIDKAVRIFR HHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH DSFD HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA