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The map label for this gene is 169627430

Identifier: 169627430

GI number: 169627430

Start: 326824

End: 327261

Strand: Direct

Name: 169627430

Synonym: MAB_0326

Alternate gene names: NA

Gene position: 326824-327261 (Clockwise)

Preceding gene: 169627424

Following gene: 169627431

Centisome position: 6.45

GC content: 64.38

Gene sequence:

>438_bases
ATGAGTGAATCCGATGAGATCGAGCCGCTCGGTTACCTGATGTTCCGGGCCGGGGCGGTGATGCGCCCACGGGTTCTTGC
CGTGCTGCGGCCGCTGGGGCTCGGGATGCCGGAGTTCATGTGCCTGCGGATGCTCAACGAGAACCCCGGCCGTACCAGTG
CGGAGCTGGCGCGCGAGAACAACGTCTCGGCGCAGGCGATGAATCAGGTGCTCAACGGATTGCAGAACATCTCGCTGGTT
TCCCGGCCGGCCGTGCCTGCCTCGGGGCGGGCGTTACCGGCGAAGGTCACCGCCAAGGGCAAGGCGCTACTCAAACGTGT
GGAGTCGGCCATTTGGGCAGCAGAGGATGAGATGTTCAGCCGGCTGGGCGTCGATGATCAACGAGAGCTCCGCCGGATAC
TGGGCCGCCTTATCGACGCTGCCAGCGAAAACGAGTGA

Upstream 100 bases:

>100_bases
GTGCAACGGATCGGTCCTCGGGTGACATCGAATCGATCGACCGTGTTCCGGCCATGGGTTTCTGCACGCGCGCTGGAACG
TTCATGCCAGGATGCTTGCG

Downstream 100 bases:

>100_bases
GGATCCCCACCCAACCAGTCGGTTGGTTAAACGGTTAGGGTGAGTGCTGTGTCACAGTCGACCGGCCAATTCCGCGCTCA
TCACCAGAGCACGTCGCAGG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MSESDEIEPLGYLMFRAGAVMRPRVLAVLRPLGLGMPEFMCLRMLNENPGRTSAELARENNVSAQAMNQVLNGLQNISLV
SRPAVPASGRALPAKVTAKGKALLKRVESAIWAAEDEMFSRLGVDDQRELRRILGRLIDAASENE

Sequences:

>Translated_145_residues
MSESDEIEPLGYLMFRAGAVMRPRVLAVLRPLGLGMPEFMCLRMLNENPGRTSAELARENNVSAQAMNQVLNGLQNISLV
SRPAVPASGRALPAKVTAKGKALLKRVESAIWAAEDEMFSRLGVDDQRELRRILGRLIDAASENE
>Mature_144_residues
SESDEIEPLGYLMFRAGAVMRPRVLAVLRPLGLGMPEFMCLRMLNENPGRTSAELARENNVSAQAMNQVLNGLQNISLVS
RPAVPASGRALPAKVTAKGKALLKRVESAIWAAEDEMFSRLGVDDQRELRRILGRLIDAASENE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 15904; Mature: 15773

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESDEIEPLGYLMFRAGAVMRPRVLAVLRPLGLGMPEFMCLRMLNENPGRTSAELAREN
CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHC
NVSAQAMNQVLNGLQNISLVSRPAVPASGRALPAKVTAKGKALLKRVESAIWAAEDEMFS
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLGVDDQRELRRILGRLIDAASENE
HCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SESDEIEPLGYLMFRAGAVMRPRVLAVLRPLGLGMPEFMCLRMLNENPGRTSAELAREN
CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHC
NVSAQAMNQVLNGLQNISLVSRPAVPASGRALPAKVTAKGKALLKRVESAIWAAEDEMFS
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLGVDDQRELRRILGRLIDAASENE
HCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]