Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
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Accession | NC_010397 |
Length | 5,067,172 |
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The map label for this gene is 169627407
Identifier: 169627407
GI number: 169627407
Start: 305387
End: 306196
Strand: Direct
Name: 169627407
Synonym: MAB_0303
Alternate gene names: NA
Gene position: 305387-306196 (Clockwise)
Preceding gene: 169627406
Following gene: 169627408
Centisome position: 6.03
GC content: 63.33
Gene sequence:
>810_bases ATGATCACCACAAAGACTGTCAATGGCGTGCAGATCGCCTTCGATGACCAGGGGCATGAACCAGGCCCGGTGTTCGTCAC GCTGAGCGGTTGGGCGCACGATCTTCGCGCGTATGACGGCATGCTGCCGTATCTACGGGCAGCGCAGCGGACGGTCCGCG TATGTTGGCGCGGGCATGGGCCCGATCGGAATCTAGTTGGCGACTTCGGTATTGACGAGATGGCGGCAGACACGATCGGC CTGCTGGATGCGCTTGAGGTGGACAGTTTCGTACCAATCGCCCACGCGCACGGTGGATGGGCGGCGCTCGAGATCGCTGA TCGGCTCGGCGCTCAGCGGGTCCCGGCCGTGATGATCCTCGATCTCATCATGACGCCAGCACCGCGGGAGTTCGTTGCCG CGCTGCACGGTATCCAGGATCCAGAGCGCTGGAAGGAAGGGCGTGATGGCCTCGTTCAGTCGTGGCTGGCGGGGACCACC AATCAAGCGGTGCTGGATCACGTGCGATACGACAGCGGCGGTCACGGTTTTGACATGTGGGCTCGTGCTGGCCGGGTGAT TGACGAGGCCTACCGAACCTGGGGATCGCCGATGCGGCGCATGGAGGCTCTGGCGGAACCGTGCGCGATCCGGCACGTGT TCTCACATCCCAAGATCGGGGAGTACGACGCACTTCACGACGATTTCGCCGCCCGCCATCCATGGTTTAGCTACCGTCGT CTCGGGGGCGAAACACACTTCCCCGGCATTGAGCTGCCTCAACAGGTGGCGGCCGAAGCGATCGATCTGCTTGCTGGCGC GCGCATCTGA
Upstream 100 bases:
>100_bases TCGGCTCCGTACCGGAGGTGCTTCGTGGGCCGCTGCTGGGCGCACTGGGCCGCAGCCGCAGTTCCGCGACTTCCCAATTG ATCAAGAAAAGGAGTGCCGC
Downstream 100 bases:
>100_bases GTGTCGGCGATGGCTGTCGGTGACAGTCGTTGGTGTTCGAACATGGGTTCGATTGGGGTGGTGGAGGCGGCGGTTGATGC TGTCTGCGCTGAGTCGATCG
Product: putative dioxygenase (1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase)
Products: NA
Alternate protein names: 1H-3-Hydroxy-4-Oxoquinaldine 2 4-Dioxygenase
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MITTKTVNGVQIAFDDQGHEPGPVFVTLSGWAHDLRAYDGMLPYLRAAQRTVRVCWRGHGPDRNLVGDFGIDEMAADTIG LLDALEVDSFVPIAHAHGGWAALEIADRLGAQRVPAVMILDLIMTPAPREFVAALHGIQDPERWKEGRDGLVQSWLAGTT NQAVLDHVRYDSGGHGFDMWARAGRVIDEAYRTWGSPMRRMEALAEPCAIRHVFSHPKIGEYDALHDDFAARHPWFSYRR LGGETHFPGIELPQQVAAEAIDLLAGARI
Sequences:
>Translated_269_residues MITTKTVNGVQIAFDDQGHEPGPVFVTLSGWAHDLRAYDGMLPYLRAAQRTVRVCWRGHGPDRNLVGDFGIDEMAADTIG LLDALEVDSFVPIAHAHGGWAALEIADRLGAQRVPAVMILDLIMTPAPREFVAALHGIQDPERWKEGRDGLVQSWLAGTT NQAVLDHVRYDSGGHGFDMWARAGRVIDEAYRTWGSPMRRMEALAEPCAIRHVFSHPKIGEYDALHDDFAARHPWFSYRR LGGETHFPGIELPQQVAAEAIDLLAGARI >Mature_269_residues MITTKTVNGVQIAFDDQGHEPGPVFVTLSGWAHDLRAYDGMLPYLRAAQRTVRVCWRGHGPDRNLVGDFGIDEMAADTIG LLDALEVDSFVPIAHAHGGWAALEIADRLGAQRVPAVMILDLIMTPAPREFVAALHGIQDPERWKEGRDGLVQSWLAGTT NQAVLDHVRYDSGGHGFDMWARAGRVIDEAYRTWGSPMRRMEALAEPCAIRHVFSHPKIGEYDALHDDFAARHPWFSYRR LGGETHFPGIELPQQVAAEAIDLLAGARI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29760; Mature: 29760
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITTKTVNGVQIAFDDQGHEPGPVFVTLSGWAHDLRAYDGMLPYLRAAQRTVRVCWRGHG CCCCCCCCCEEEEECCCCCCCCCEEEEECCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCC PDRNLVGDFGIDEMAADTIGLLDALEVDSFVPIAHAHGGWAALEIADRLGAQRVPAVMIL CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHCCHHCCHHHHH DLIMTPAPREFVAALHGIQDPERWKEGRDGLVQSWLAGTTNQAVLDHVRYDSGGHGFDMW HHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHH ARAGRVIDEAYRTWGSPMRRMEALAEPCAIRHVFSHPKIGEYDALHDDFAARHPWFSYRR HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHH LGGETHFPGIELPQQVAAEAIDLLAGARI CCCCCCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MITTKTVNGVQIAFDDQGHEPGPVFVTLSGWAHDLRAYDGMLPYLRAAQRTVRVCWRGHG CCCCCCCCCEEEEECCCCCCCCCEEEEECCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCC PDRNLVGDFGIDEMAADTIGLLDALEVDSFVPIAHAHGGWAALEIADRLGAQRVPAVMIL CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHCCHHCCHHHHH DLIMTPAPREFVAALHGIQDPERWKEGRDGLVQSWLAGTTNQAVLDHVRYDSGGHGFDMW HHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHH ARAGRVIDEAYRTWGSPMRRMEALAEPCAIRHVFSHPKIGEYDALHDDFAARHPWFSYRR HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHH LGGETHFPGIELPQQVAAEAIDLLAGARI CCCCCCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA