| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is dhbA [H]
Identifier: 169627400
GI number: 169627400
Start: 298153
End: 298911
Strand: Direct
Name: dhbA [H]
Synonym: MAB_0296
Alternate gene names: 169627400
Gene position: 298153-298911 (Clockwise)
Preceding gene: 169627399
Following gene: 169627401
Centisome position: 5.88
GC content: 66.53
Gene sequence:
>759_bases ATGGTAGCCGTCGTCACCGGCGCCGGTGGGGGGGTTGGGTCGCGGGTGGTGACCACCCTGGCTCGCCGGCACGAGCGGGT CGTTGCGGTGGACATCGACGAGGTGGCCATCAAGCAACTCGTCGAATACGCCGCCGATGAGGGGCTTGACGTTATCGGGC AGATTCTGGATATCACCGACGACACCGCCGTCGCGGTGGGAGTGTCCGATATCGAGTCGAGAGTGGGACCGATCACCGCG CTGGTCAACGGCGCGGGGGTGTTGAGGACCGGTGCGGCAGTGGAGTTCTCTGACGCGGACTGGGCACGTACCTTCGATGT CAATGTCCGTGCGCCCTTCGTGCTGAGCCGAGAGGTGGCCCGGCGTATGATTCCGCGCCGCGCGGGATCCGTCGTGACGG TCGCCTCCAACGCCGCCCTGGTGGCGCGCAAGGGCATGACGGCCTACGCGGCATCCAAGGCCGCCGCCAACGCCTTCACC AAGAGCCTCGGCCTCGAGCTGGCCGAGTACGGAATCCGTTGTAACGTGGTGGCTCCGGGATCCACCGACACACCCATGCT GCGGGCAATGCTTGGCGATTCCTCCGACGCCGGACTGGTTGCCGGAAGCCTTGGCGACTACAAGCCCGGCATCCCCCTGG GGCGTGTCGCCCAACCACAGCACATCGCCGATGCGGTGGCCTTCCTGCTCTCCGACCAAGCCGCTCACATCACCATGCAC ACGCTGGTGGTCGACGGTGGCGCGACACTAGGAGTCTGA
Upstream 100 bases:
>100_bases GCGTCTTCGATAGTTCGCAGAACGATGAAGTGGGCCAGCGGTATTCGACGCTGTGCGATCCCCGTCTCAACACTGCGCAG GCCACCGAGGTGGTGTCGGC
Downstream 100 bases:
>100_bases ACAATGACGACCGCCACTCGCGGTATTCCCATGATCGCCGAATATGACTTGCCGACAGTCGACCTGCTGCCGTCTAACAC GGCAACCTGGCGGATCGACC
Product: putative 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase
Products: NA
Alternate protein names: Cold shock protein CSI14 [H]
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MVAVVTGAGGGVGSRVVTTLARRHERVVAVDIDEVAIKQLVEYAADEGLDVIGQILDITDDTAVAVGVSDIESRVGPITA LVNGAGVLRTGAAVEFSDADWARTFDVNVRAPFVLSREVARRMIPRRAGSVVTVASNAALVARKGMTAYAASKAAANAFT KSLGLELAEYGIRCNVVAPGSTDTPMLRAMLGDSSDAGLVAGSLGDYKPGIPLGRVAQPQHIADAVAFLLSDQAAHITMH TLVVDGGATLGV
Sequences:
>Translated_252_residues MVAVVTGAGGGVGSRVVTTLARRHERVVAVDIDEVAIKQLVEYAADEGLDVIGQILDITDDTAVAVGVSDIESRVGPITA LVNGAGVLRTGAAVEFSDADWARTFDVNVRAPFVLSREVARRMIPRRAGSVVTVASNAALVARKGMTAYAASKAAANAFT KSLGLELAEYGIRCNVVAPGSTDTPMLRAMLGDSSDAGLVAGSLGDYKPGIPLGRVAQPQHIADAVAFLLSDQAAHITMH TLVVDGGATLGV >Mature_252_residues MVAVVTGAGGGVGSRVVTTLARRHERVVAVDIDEVAIKQLVEYAADEGLDVIGQILDITDDTAVAVGVSDIESRVGPITA LVNGAGVLRTGAAVEFSDADWARTFDVNVRAPFVLSREVARRMIPRRAGSVVTVASNAALVARKGMTAYAASKAAANAFT KSLGLELAEYGIRCNVVAPGSTDTPMLRAMLGDSSDAGLVAGSLGDYKPGIPLGRVAQPQHIADAVAFLLSDQAAHITMH TLVVDGGATLGV
Specific function: Siderophore biosynthesis; enterobactin biosynthesis. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI66933014, Length=237, Percent_Identity=27.8481012658228, Blast_Score=111, Evalue=6e-25, Organism=Homo sapiens, GI40254992, Length=249, Percent_Identity=32.1285140562249, Blast_Score=108, Evalue=5e-24, Organism=Homo sapiens, GI7705925, Length=245, Percent_Identity=33.8775510204082, Blast_Score=105, Evalue=3e-23, Organism=Homo sapiens, GI32483357, Length=254, Percent_Identity=31.496062992126, Blast_Score=104, Evalue=7e-23, Organism=Homo sapiens, GI15277342, Length=255, Percent_Identity=29.0196078431373, Blast_Score=101, Evalue=5e-22, Organism=Homo sapiens, GI142976729, Length=190, Percent_Identity=27.8947368421053, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI5031737, Length=249, Percent_Identity=29.3172690763052, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI59889578, Length=230, Percent_Identity=30.4347826086957, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI210032110, Length=195, Percent_Identity=25.6410256410256, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI126723750, Length=255, Percent_Identity=28.6274509803922, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI19923817, Length=265, Percent_Identity=29.811320754717, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI4503817, Length=193, Percent_Identity=27.4611398963731, Blast_Score=74, Evalue=8e-14, Organism=Homo sapiens, GI40807363, Length=191, Percent_Identity=26.7015706806283, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI20149619, Length=207, Percent_Identity=28.5024154589372, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI25282469, Length=215, Percent_Identity=27.906976744186, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI126723191, Length=184, Percent_Identity=30.4347826086957, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI33667109, Length=184, Percent_Identity=32.0652173913043, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI4504505, Length=187, Percent_Identity=26.7379679144385, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI7657478, Length=202, Percent_Identity=30.6930693069307, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI10190704, Length=254, Percent_Identity=26.3779527559055, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1786812, Length=248, Percent_Identity=41.9354838709677, Blast_Score=178, Evalue=3e-46, Organism=Escherichia coli, GI1787335, Length=246, Percent_Identity=36.9918699186992, Blast_Score=146, Evalue=1e-36, Organism=Escherichia coli, GI1790717, Length=249, Percent_Identity=30.9236947791165, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI87082100, Length=249, Percent_Identity=33.7349397590361, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI87082160, Length=247, Percent_Identity=30.3643724696356, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI2367175, Length=259, Percent_Identity=33.2046332046332, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1788459, Length=251, Percent_Identity=29.8804780876494, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1787905, Length=248, Percent_Identity=31.8548387096774, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1789208, Length=247, Percent_Identity=26.3157894736842, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1789057, Length=256, Percent_Identity=28.125, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1789378, Length=256, Percent_Identity=28.125, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI2367365, Length=186, Percent_Identity=32.7956989247312, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1787820, Length=246, Percent_Identity=25.2032520325203, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI115534694, Length=245, Percent_Identity=33.0612244897959, Blast_Score=107, Evalue=6e-24, Organism=Caenorhabditis elegans, GI17555706, Length=249, Percent_Identity=31.7269076305221, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71994600, Length=250, Percent_Identity=30.4, Blast_Score=103, Evalue=8e-23, Organism=Caenorhabditis elegans, GI25147288, Length=251, Percent_Identity=30.2788844621514, Blast_Score=102, Evalue=1e-22, Organism=Caenorhabditis elegans, GI71994604, Length=249, Percent_Identity=30.9236947791165, Blast_Score=99, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17561402, Length=250, Percent_Identity=30.4, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17559104, Length=262, Percent_Identity=27.0992366412214, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17560150, Length=259, Percent_Identity=26.6409266409266, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17560676, Length=247, Percent_Identity=27.1255060728745, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17551412, Length=261, Percent_Identity=28.735632183908, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI193204405, Length=261, Percent_Identity=27.2030651340996, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17562990, Length=260, Percent_Identity=26.1538461538462, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17562906, Length=262, Percent_Identity=30.1526717557252, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17538486, Length=263, Percent_Identity=26.615969581749, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17538480, Length=259, Percent_Identity=27.027027027027, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17562908, Length=261, Percent_Identity=28.3524904214559, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17565030, Length=264, Percent_Identity=27.6515151515151, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17536651, Length=258, Percent_Identity=28.6821705426357, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17560332, Length=262, Percent_Identity=27.8625954198473, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17531453, Length=261, Percent_Identity=26.4367816091954, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17562904, Length=264, Percent_Identity=25.7575757575758, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17562910, Length=263, Percent_Identity=28.8973384030418, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17536025, Length=261, Percent_Identity=29.8850574712644, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17560220, Length=262, Percent_Identity=26.3358778625954, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17508895, Length=190, Percent_Identity=27.8947368421053, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI193203117, Length=186, Percent_Identity=26.8817204301075, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI193203115, Length=186, Percent_Identity=26.8817204301075, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17568967, Length=186, Percent_Identity=29.0322580645161, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17563726, Length=186, Percent_Identity=29.5698924731183, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17544670, Length=266, Percent_Identity=24.4360902255639, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI72000259, Length=260, Percent_Identity=26.5384615384615, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17561272, Length=220, Percent_Identity=28.1818181818182, Blast_Score=70, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17538182, Length=208, Percent_Identity=29.8076923076923, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17564282, Length=188, Percent_Identity=24.468085106383, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17508651, Length=260, Percent_Identity=26.9230769230769, Blast_Score=64, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6322227, Length=206, Percent_Identity=29.6116504854369, Blast_Score=76, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6322861, Length=185, Percent_Identity=30.2702702702703, Blast_Score=72, Evalue=8e-14, Organism=Saccharomyces cerevisiae, GI6322226, Length=200, Percent_Identity=32, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322067, Length=175, Percent_Identity=30.2857142857143, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI24639444, Length=252, Percent_Identity=32.1428571428571, Blast_Score=118, Evalue=3e-27, Organism=Drosophila melanogaster, GI24643142, Length=249, Percent_Identity=32.9317269076305, Blast_Score=107, Evalue=8e-24, Organism=Drosophila melanogaster, GI28571526, Length=247, Percent_Identity=33.6032388663968, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI23397609, Length=247, Percent_Identity=29.9595141700405, Blast_Score=94, Evalue=6e-20, Organism=Drosophila melanogaster, GI21357041, Length=250, Percent_Identity=32.8, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI24644337, Length=176, Percent_Identity=36.3636363636364, Blast_Score=91, Evalue=9e-19, Organism=Drosophila melanogaster, GI21355319, Length=251, Percent_Identity=29.0836653386454, Blast_Score=91, Evalue=9e-19, Organism=Drosophila melanogaster, GI24644339, Length=253, Percent_Identity=30.0395256916996, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24581726, Length=229, Percent_Identity=27.9475982532751, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI21356301, Length=189, Percent_Identity=29.6296296296296, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI281364892, Length=192, Percent_Identity=29.1666666666667, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI221510726, Length=181, Percent_Identity=32.5966850828729, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI18859837, Length=186, Percent_Identity=28.494623655914, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24584748, Length=189, Percent_Identity=32.2751322751323, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI161076933, Length=189, Percent_Identity=32.2751322751323, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI21355631, Length=226, Percent_Identity=26.9911504424779, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24640492, Length=191, Percent_Identity=23.0366492146597, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24584752, Length=181, Percent_Identity=30.939226519337, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR003560 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.28 [H]
Molecular weight: Translated: 25875; Mature: 25875
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAVVTGAGGGVGSRVVTTLARRHERVVAVDIDEVAIKQLVEYAADEGLDVIGQILDITD CEEEEECCCCCHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHCCCC DTAVAVGVSDIESRVGPITALVNGAGVLRTGAAVEFSDADWARTFDVNVRAPFVLSREVA CCEEEEEHHHHHHHHCHHHEECCCCCEEECCCEEEECCCCCEEEEEECCCCCHHHHHHHH RRMIPRRAGSVVTVASNAALVARKGMTAYAASKAAANAFTKSLGLELAEYGIRCNVVAPG HHHHHHCCCCEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC STDTPMLRAMLGDSSDAGLVAGSLGDYKPGIPLGRVAQPQHIADAVAFLLSDQAAHITMH CCCCHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEE TLVVDGGATLGV EEEEECCCCCCC >Mature Secondary Structure MVAVVTGAGGGVGSRVVTTLARRHERVVAVDIDEVAIKQLVEYAADEGLDVIGQILDITD CEEEEECCCCCHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHCCCC DTAVAVGVSDIESRVGPITALVNGAGVLRTGAAVEFSDADWARTFDVNVRAPFVLSREVA CCEEEEEHHHHHHHHCHHHEECCCCCEEECCCEEEECCCCCEEEEEECCCCCHHHHHHHH RRMIPRRAGSVVTVASNAALVARKGMTAYAASKAAANAFTKSLGLELAEYGIRCNVVAPG HHHHHHCCCCEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC STDTPMLRAMLGDSSDAGLVAGSLGDYKPGIPLGRVAQPQHIADAVAFLLSDQAAHITMH CCCCHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEE TLVVDGGATLGV EEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8921902; 9384377; 8224884 [H]