Click here to switch to the map view.

The map label for this gene is yidH [H]

Identifier: 16767091

GI number: 16767091

Start: 4006736

End: 4007083

Strand: Reverse

Name: yidH [H]

Synonym: STM3805

Alternate gene names: 16767091

Gene position: 4007083-4006736 (Counterclockwise)

Preceding gene: 16767092

Following gene: 16767090

Centisome position: 82.49

GC content: 54.02

Gene sequence:

>348_bases
ATGAAGATTTCCCGCCTCGGAGAAGCGCCGGATTATCGCTTCTCACTGGCAAATGAGCGCACCTTTCTGGCGTGGATTCG
CACCTCGCTGGGATTTCTGGCGGCAGGCGTCGGTCTTGATCAGCTCGCCCCGGATTTTGCCACGCCGGTGATCCGTGAAC
TGCTGGCGCTATTGTTGTGTCTGTTTGCGGGCGGCCTGGCGATTTATGGCTATCTACGCTGGTTACGTAATGAAAAAGCG
ATGCGCCTGAAAGAGGATTTGCCCTATACCCATAGCCTGTTGATCATCAGCGTTATTTTGATGATTGTCGCGGTGATAGT
GATGGGGCTGGTACTGTATGCCGGATAG

Upstream 100 bases:

>100_bases
AAGATTCCCTTGCTGCGGGATAATGTGAAGCATATCAGCAACAACGTGAGTGGTATTCTGAAAACGAACGGGAATACATA
AGAACGTAAAAGGAGTCGTC

Downstream 100 bases:

>100_bases
TCGTAAAGCCCGTCGGCAGAACGATCCGGGACTGCAACCGGAGCGTACGTCGCTGGCCTGGTTTCGCACGCTGCTGGGAT
ACGGGGCGTTAATGGCGTTA

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MKISRLGEAPDYRFSLANERTFLAWIRTSLGFLAAGVGLDQLAPDFATPVIRELLALLLCLFAGGLAIYGYLRWLRNEKA
MRLKEDLPYTHSLLIISVILMIVAVIVMGLVLYAG

Sequences:

>Translated_115_residues
MKISRLGEAPDYRFSLANERTFLAWIRTSLGFLAAGVGLDQLAPDFATPVIRELLALLLCLFAGGLAIYGYLRWLRNEKA
MRLKEDLPYTHSLLIISVILMIVAVIVMGLVLYAG
>Mature_115_residues
MKISRLGEAPDYRFSLANERTFLAWIRTSLGFLAAGVGLDQLAPDFATPVIRELLALLLCLFAGGLAIYGYLRWLRNEKA
MRLKEDLPYTHSLLIISVILMIVAVIVMGLVLYAG

Specific function: Unknown

COG id: COG2149

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv2272 [H]

Homologues:

Organism=Escherichia coli, GI1790110, Length=115, Percent_Identity=94.7826086956522, Blast_Score=204, Evalue=8e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003807 [H]

Pfam domain/function: PF02656 DUF202 [H]

EC number: NA

Molecular weight: Translated: 12785; Mature: 12785

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISRLGEAPDYRFSLANERTFLAWIRTSLGFLAAGVGLDQLAPDFATPVIRELLALLLC
CCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCHHHHCCHHCCHHHHHHHHHHHH
LFAGGLAIYGYLRWLRNEKAMRLKEDLPYTHSLLIISVILMIVAVIVMGLVLYAG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKISRLGEAPDYRFSLANERTFLAWIRTSLGFLAAGVGLDQLAPDFATPVIRELLALLLC
CCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCHHHHCCHHCCHHHHHHHHHHHH
LFAGGLAIYGYLRWLRNEKAMRLKEDLPYTHSLLIISVILMIVAVIVMGLVLYAG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]