| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16767085
Identifier: 16767085
GI number: 16767085
Start: 4000800
End: 4001885
Strand: Reverse
Name: 16767085
Synonym: STM3799
Alternate gene names: NA
Gene position: 4001885-4000800 (Counterclockwise)
Preceding gene: 16767086
Following gene: 16767081
Centisome position: 82.39
GC content: 57.37
Gene sequence:
>1086_bases GTGGTAAAAATTTTAGGGGGCGTCGTGTTTAAACCGCTTATTGCCTCTCTCATGCTGACCAGCGCGGTCGTCTATGCGAA ACCGATGCCTTTGACGGCGGCGCGCTATGCGCAGCAGCTTGGCGTTGGGATGGATGTTGACTGGGCGCGAACGGAACGGG GTATCCGCGAGTTTGATCCGCTGGTCGTGCGGGATTTTAAGGCAAAAGGGTTAACGCATGTCCGTATTCGTGTGGCAGGC GCGCCGACGGAAGCGCGCCTCATCCATTTGCGTAAGCTGGTAGAGGCCTGCGAATACTATGGCGTCATACCCATTATTGC CTATCAGGCGGATGCGTATAAAACCGATCCCAGCGCCAGCCATGAAAAGGAGCTGATCAACTGGTGGAGCGTGGTCGCGC GCTATTTTGGTCAGACATCCCCGCTTCTGGGGTTCGATCTCATTTATGAGCCTGCCGACAAACTTAATCATAATATGGCG TCGCTGAATCGCGTATATGACAAAACCATCCGCCTGATTCACGCCATTGACCCACAGCGGATGATTTTCGTTGCCCCCCG CATGCGCGCCGCGCCGGAGGATTTGTCGGCGCTTAAACTGCCGGCGCAAAGCCAGAACTATGTACTGGCGGAGTGGCACA TCTTCCCGTGGGGACCCCTGAAAAGCGGCGGTAAATATCCGTGGACGTCAGGCACGGCGGCGGAAAAAGCGGCGATTCGG GCACGGATCAACGCTGCGGTTCGCTGGCAGCATAAGACCGGCCATGCAAGCTGGGTGGGCGGATGGGCGCCGGGAGAGTC GATAAAAATGACGCCGGTCGCTTCACAGTTCGCGTTTGCCCGTTTTATGGCCTGCGAGCTGAAAAAAGCGCATATTCCGT ATGCGATAAACGCGGACACTCAGTTTTATGACGGCGAAGAAGGAGCGTGGCGTCCGGCGCAGGAGTCCCTGCTCAATGCG ATGATCGCGCCGGAATGTGAAACGCCCGGCAAAACGCCGGGCGAGGGAAACGTTAAACCGTCTGCCCCTGATGCGATATC CGTGACGCCAGCGGCAGCCAGCACGCCAGGATCAGCAATCCCATAA
Upstream 100 bases:
>100_bases CGAGGCATTTATTCGCTGGTTGCAGGAACAGGTGTGAAGATTTATTACGCTTTGTCGCTACACCTGCCGGGAGTGAATAT GCTAAATACGTGCTATCACC
Downstream 100 bases:
>100_bases GGGTCATCAGCAATCCCAGACTGCCCTGACCGGTTTGCGGCAGCATTGCCGAAAGCCACGCCAGTACGCCGGAACCAATA TTTTGCAGCCCGCCGACCAG
Product: periplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MVKILGGVVFKPLIASLMLTSAVVYAKPMPLTAARYAQQLGVGMDVDWARTERGIREFDPLVVRDFKAKGLTHVRIRVAG APTEARLIHLRKLVEACEYYGVIPIIAYQADAYKTDPSASHEKELINWWSVVARYFGQTSPLLGFDLIYEPADKLNHNMA SLNRVYDKTIRLIHAIDPQRMIFVAPRMRAAPEDLSALKLPAQSQNYVLAEWHIFPWGPLKSGGKYPWTSGTAAEKAAIR ARINAAVRWQHKTGHASWVGGWAPGESIKMTPVASQFAFARFMACELKKAHIPYAINADTQFYDGEEGAWRPAQESLLNA MIAPECETPGKTPGEGNVKPSAPDAISVTPAAASTPGSAIP
Sequences:
>Translated_361_residues MVKILGGVVFKPLIASLMLTSAVVYAKPMPLTAARYAQQLGVGMDVDWARTERGIREFDPLVVRDFKAKGLTHVRIRVAG APTEARLIHLRKLVEACEYYGVIPIIAYQADAYKTDPSASHEKELINWWSVVARYFGQTSPLLGFDLIYEPADKLNHNMA SLNRVYDKTIRLIHAIDPQRMIFVAPRMRAAPEDLSALKLPAQSQNYVLAEWHIFPWGPLKSGGKYPWTSGTAAEKAAIR ARINAAVRWQHKTGHASWVGGWAPGESIKMTPVASQFAFARFMACELKKAHIPYAINADTQFYDGEEGAWRPAQESLLNA MIAPECETPGKTPGEGNVKPSAPDAISVTPAAASTPGSAIP >Mature_361_residues MVKILGGVVFKPLIASLMLTSAVVYAKPMPLTAARYAQQLGVGMDVDWARTERGIREFDPLVVRDFKAKGLTHVRIRVAG APTEARLIHLRKLVEACEYYGVIPIIAYQADAYKTDPSASHEKELINWWSVVARYFGQTSPLLGFDLIYEPADKLNHNMA SLNRVYDKTIRLIHAIDPQRMIFVAPRMRAAPEDLSALKLPAQSQNYVLAEWHIFPWGPLKSGGKYPWTSGTAAEKAAIR ARINAAVRWQHKTGHASWVGGWAPGESIKMTPVASQFAFARFMACELKKAHIPYAINADTQFYDGEEGAWRPAQESLLNA MIAPECETPGKTPGEGNVKPSAPDAISVTPAAASTPGSAIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39647; Mature: 39647
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKILGGVVFKPLIASLMLTSAVVYAKPMPLTAARYAQQLGVGMDVDWARTERGIREFDP CEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHCCHHHCCC LVVRDFKAKGLTHVRIRVAGAPTEARLIHLRKLVEACEYYGVIPIIAYQADAYKTDPSAS HHEEHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCH HEKELINWWSVVARYFGQTSPLLGFDLIYEPADKLNHNMASLNRVYDKTIRLIHAIDPQR HHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCE MIFVAPRMRAAPEDLSALKLPAQSQNYVLAEWHIFPWGPLKSGGKYPWTSGTAAEKAAIR EEEECCCCCCCCCCHHHEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHH ARINAAVRWQHKTGHASWVGGWAPGESIKMTPVASQFAFARFMACELKKAHIPYAINADT HHHCEEEEEECCCCCCCEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCEEECCCC QFYDGEEGAWRPAQESLLNAMIAPECETPGKTPGEGNVKPSAPDAISVTPAAASTPGSAI EEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC P C >Mature Secondary Structure MVKILGGVVFKPLIASLMLTSAVVYAKPMPLTAARYAQQLGVGMDVDWARTERGIREFDP CEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHCCHHHCCC LVVRDFKAKGLTHVRIRVAGAPTEARLIHLRKLVEACEYYGVIPIIAYQADAYKTDPSAS HHEEHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCH HEKELINWWSVVARYFGQTSPLLGFDLIYEPADKLNHNMASLNRVYDKTIRLIHAIDPQR HHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCE MIFVAPRMRAAPEDLSALKLPAQSQNYVLAEWHIFPWGPLKSGGKYPWTSGTAAEKAAIR EEEECCCCCCCCCCHHHEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHH ARINAAVRWQHKTGHASWVGGWAPGESIKMTPVASQFAFARFMACELKKAHIPYAINADT HHHCEEEEEECCCCCCCEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCEEECCCC QFYDGEEGAWRPAQESLLNAMIAPECETPGKTPGEGNVKPSAPDAISVTPAAASTPGSAI EEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA